RNA–Protein interactions for RNA: ENST00000445676.5

UBE2F-216, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-216ENST00000445676 ODF4Q2M2E3 257 aa11.54□□□□□ -0.56
UBE2F-216ENST00000445676 SPIN3Q5JUX0 258 aa11.54□□□□□ -0.56
UBE2F-216ENST00000445676 TMEM236Q5W0B7 351 aa11.54□□□□□ -0.56
UBE2F-216ENST00000445676 ZNF322Q6U7Q0 402 aaPredicted RBP11.54□□□□□ -0.56
UBE2F-216ENST00000445676 OR9G1Q8NH87 305 aa11.54□□□□□ -0.56
UBE2F-216ENST00000445676 C4orf3Q8WVX3 66 aa11.54□□□□□ -0.56
UBE2F-216ENST00000445676 BORCS8Q96FH0 119 aa11.54□□□□□ -0.56
UBE2F-216ENST00000445676 KIRREL1Q96J84 757 aa11.54□□□□□ -0.56
UBE2F-216ENST00000445676 CHST5Q9GZS9 411 aa11.54□□□□□ -0.56
UBE2F-216ENST00000445676 ZMAT4Q9H898 229 aa11.54□□□□□ -0.56
UBE2F-216ENST00000445676 ACTR3BQ9P1U1 418 aa11.54□□□□□ -0.56
UBE2F-216ENST00000445676 MRM2Q9UI43 246 aaKnown RBP11.54□□□□□ -0.56
UBE2F-216ENST00000445676 AMMECR1Q9Y4X0 333 aaPredicted RBP11.54□□□□□ -0.56
UBE2F-216ENST00000445676 SNX5Q9Y5X3 404 aa11.54□□□□□ -0.56
UBE2F-216ENST00000445676 SIRT4Q9Y6E7 314 aaPredicted RBP11.54□□□□□ -0.56
UBE2F-216ENST00000445676 FUOMA2VDF0 154 aa11.53□□□□□ -0.56
UBE2F-216ENST00000445676 ZNF729A6NN14 1252 aaPredicted RBP11.53□□□□□ -0.56
UBE2F-216ENST00000445676 GATBO75879 557 aaKnown RBP11.53□□□□□ -0.56
UBE2F-216ENST00000445676 IGHV3-7P01780 117 aa11.53□□□□□ -0.56
UBE2F-216ENST00000445676 CXCR4P61073 352 aa11.53□□□□□ -0.56
UBE2F-216ENST00000445676 ASPHD1Q5U4P2 390 aa11.53□□□□□ -0.56
UBE2F-216ENST00000445676 C16orf89Q6UX73 402 aa11.53□□□□□ -0.56
UBE2F-216ENST00000445676 TMEM179BQ7Z7N9 219 aa11.53□□□□□ -0.56
UBE2F-216ENST00000445676 LEAP2Q969E1 77 aa11.53□□□□□ -0.56
UBE2F-216ENST00000445676 CNN2Q99439 309 aaKnown RBP11.53□□□□□ -0.56
UBE2F-216ENST00000445676 EDA2RQ9HAV5 297 aa11.53□□□□□ -0.56
UBE2F-216ENST00000445676 EXOSC4Q9NPD3 245 aaKnown RBP11.53□□□□□ -0.56
UBE2F-216ENST00000445676 ING3Q9NXR8 418 aa11.53□□□□□ -0.56
UBE2F-216ENST00000445676 NKX1-2Q9UD57 310 aaPredicted RBP11.53□□□□□ -0.56
UBE2F-216ENST00000445676 FRAS1Q86XX4 4008 aa11.53□□□□□ -0.56
UBE2F-216ENST00000445676 J3QR06 171 aa11.52□□□□□ -0.57
UBE2F-216ENST00000445676 CSN2P05814 226 aa11.52□□□□□ -0.57
UBE2F-216ENST00000445676 ELANEP08246 267 aa11.52□□□□□ -0.57
UBE2F-216ENST00000445676 OSMP13725 252 aa11.52□□□□□ -0.57
UBE2F-216ENST00000445676 INSL3P51460 131 aa11.52□□□□□ -0.57
UBE2F-216ENST00000445676 CFHR3Q02985 330 aa11.52□□□□□ -0.57
UBE2F-216ENST00000445676 KRBOX4Q5JUW0 171 aa11.52□□□□□ -0.57
UBE2F-216ENST00000445676 DEFB107AQ8IZN7 70 aa11.52□□□□□ -0.57
UBE2F-216ENST00000445676 OR8H3Q8N146 312 aa11.52□□□□□ -0.57
UBE2F-216ENST00000445676 OR11H1Q8NG94 326 aa11.52□□□□□ -0.57
UBE2F-216ENST00000445676 HRASLS5Q96KN8 279 aa11.52□□□□□ -0.57
UBE2F-216ENST00000445676 ABCG5Q9H222 651 aa11.52□□□□□ -0.57
UBE2F-216ENST00000445676 PPIL3Q9H2H8 161 aaKnown RBP11.52□□□□□ -0.57
UBE2F-216ENST00000445676 SLC25A19Q9HC21 320 aa11.52□□□□□ -0.57
UBE2F-216ENST00000445676 HMG20AQ9NP66 347 aa11.52□□□□□ -0.57
UBE2F-216ENST00000445676 GSTK1Q9Y2Q3 226 aa11.52□□□□□ -0.57
UBE2F-216ENST00000445676 KBTBD11-OT1A0A1B0GTJ5 212 aa11.51□□□□□ -0.57
UBE2F-216ENST00000445676 SH2D1BO14796 132 aa11.51□□□□□ -0.57
UBE2F-216ENST00000445676 SYT7O43581 403 aa11.51□□□□□ -0.57
UBE2F-216ENST00000445676 CGB3P0DN86 165 aa11.51□□□□□ -0.57
UBE2F-216ENST00000445676 CGB7P0DN87 165 aa11.51□□□□□ -0.57
UBE2F-216ENST00000445676 RBP2P50120 134 aa11.51□□□□□ -0.57
UBE2F-216ENST00000445676 RAB7AP51149 207 aa11.51□□□□□ -0.57
UBE2F-216ENST00000445676 MADCAM1Q13477 382 aa11.51□□□□□ -0.57
UBE2F-216ENST00000445676 EBI3Q14213 229 aa11.51□□□□□ -0.57
UBE2F-216ENST00000445676 GK3PQ14409 553 aa11.51□□□□□ -0.57
UBE2F-216ENST00000445676 ATXN7L3Q14CW9 347 aaPredicted RBP11.51□□□□□ -0.57
UBE2F-216ENST00000445676 SPATS1Q496A3 300 aa11.51□□□□□ -0.57
UBE2F-216ENST00000445676 TGIF2LXQ8IUE1 241 aa11.51□□□□□ -0.57
UBE2F-216ENST00000445676 SLC35F2Q8IXU6 374 aa11.51□□□□□ -0.57
UBE2F-216ENST00000445676 HS3ST5Q8IZT8 346 aa11.51□□□□□ -0.57
UBE2F-216ENST00000445676 Q8N9W7 124 aa11.51□□□□□ -0.57
UBE2F-216ENST00000445676 ISOC1Q96CN7 298 aa11.51□□□□□ -0.57
UBE2F-216ENST00000445676 RNFT2Q96EX2 444 aa11.51□□□□□ -0.57
UBE2F-216ENST00000445676 TM2D3Q9BRN9 247 aa11.51□□□□□ -0.57
UBE2F-216ENST00000445676 COMMD4Q9H0A8 199 aa11.51□□□□□ -0.57
UBE2F-216ENST00000445676 ISYNA1Q9NPH2 558 aa11.51□□□□□ -0.57
UBE2F-216ENST00000445676 TVP23BQ9NYZ1 205 aa11.51□□□□□ -0.57
UBE2F-216ENST00000445676 IGHV3-72A0A0B4J1Y9 119 aa11.5□□□□□ -0.57
UBE2F-216ENST00000445676 IGKV1-9A0A0C4DH69 117 aa11.5□□□□□ -0.57
UBE2F-216ENST00000445676 IGKV1-12A0A0C4DH73 117 aa11.5□□□□□ -0.57
UBE2F-216ENST00000445676 RPP14O95059 124 aaKnown RBP11.5□□□□□ -0.57
UBE2F-216ENST00000445676 CYB5AP00167 134 aa11.5□□□□□ -0.57
UBE2F-216ENST00000445676 IGKV1D-12P01611 117 aa11.5□□□□□ -0.57
UBE2F-216ENST00000445676 IGHG4P01861 327 aa11.5□□□□□ -0.57
UBE2F-216ENST00000445676 ZNF44P15621 663 aa11.5□□□□□ -0.57
UBE2F-216ENST00000445676 GLP1RP43220 463 aa11.5□□□□□ -0.57
UBE2F-216ENST00000445676 ATP1B3P54709 279 aa11.5□□□□□ -0.57
UBE2F-216ENST00000445676 FAM98BQ52LJ0 330 aaKnown RBP11.5□□□□□ -0.57
UBE2F-216ENST00000445676 FAM27D1Q5T7N8 215 aa11.5□□□□□ -0.57
UBE2F-216ENST00000445676 Q6P435 159 aa11.5□□□□□ -0.57
UBE2F-216ENST00000445676 SSX6Q7RTT6 188 aa11.5□□□□□ -0.57
UBE2F-216ENST00000445676 BCDIN3DQ7Z5W3 292 aaKnown RBP11.5□□□□□ -0.57
UBE2F-216ENST00000445676 CATSPERDQ86XM0 798 aa11.5□□□□□ -0.57
UBE2F-216ENST00000445676 Q8N6K4 173 aa11.5□□□□□ -0.57
UBE2F-216ENST00000445676 DNAAF1Q8NEP3 725 aa11.5□□□□□ -0.57
UBE2F-216ENST00000445676 MYOZ3Q8TDC0 251 aa11.5□□□□□ -0.57
UBE2F-216ENST00000445676 RFT1Q96AA3 541 aa11.5□□□□□ -0.57
UBE2F-216ENST00000445676 EAF1Q96JC9 268 aaPredicted RBP11.5□□□□□ -0.57
UBE2F-216ENST00000445676 ELAC2Q9BQ52 826 aaKnown RBP11.5□□□□□ -0.57
UBE2F-216ENST00000445676 GON7Q9BXV9 100 aa11.5□□□□□ -0.57
UBE2F-216ENST00000445676 ADGRL4Q9HBW9 690 aa11.5□□□□□ -0.57
UBE2F-216ENST00000445676 LIN7CQ9NUP9 197 aaKnown RBP11.5□□□□□ -0.57
UBE2F-216ENST00000445676 CALYQ9NYX4 217 aa11.5□□□□□ -0.57
UBE2F-216ENST00000445676 PSG11Q9UQ72 335 aa11.5□□□□□ -0.57
UBE2F-216ENST00000445676 TRIM64CA6NLI5 447 aa11.49□□□□□ -0.57
UBE2F-216ENST00000445676 NCBP2LA6PVI3 153 aaKnown RBP11.49□□□□□ -0.57
UBE2F-216ENST00000445676 SLC33A1O00400 549 aaPredicted RBP11.49□□□□□ -0.57
UBE2F-216ENST00000445676 SPNP16150 400 aa11.49□□□□□ -0.57
UBE2F-216ENST00000445676 PSMB8P28062 276 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms