RNA–Protein interactions for RNA: ENST00000445497.1

UBBP3-201, Transcript of ubiquitin B pseudogene 3, humanhuman

BASIC

Gene UBBP3, Length 241 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP3-201ENST00000445497 KIR2DL4Q99706 377 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 NDFIP1Q9BT67 221 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 SMIM3Q9BZL3 60 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 ZNF436Q9C0F3 470 aaPredicted RBP2.35□□□□□ -2.03
UBBP3-201ENST00000445497 C20orf85Q9H1P6 137 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 CXXC4Q9H2H0 198 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 CWH43Q9H720 699 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 TUBA4BQ9H853 241 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 MOB1AQ9H8S9 216 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 NOX3Q9HBY0 568 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 APOBEC3GQ9HC16 384 aaKnown RBP2.35□□□□□ -2.03
UBBP3-201ENST00000445497 NRN1Q9NPD7 142 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 MRPL27Q9P0M9 148 aaKnown RBP2.35□□□□□ -2.03
UBBP3-201ENST00000445497 SLC23A2Q9UGH3 650 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 SLC7A7Q9UM01 511 aa2.35□□□□□ -2.03
UBBP3-201ENST00000445497 SSH2Q76I76 1423 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 FANCAO15360 1455 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 COL5A2P05997 1499 aaPredicted RBP2.34□□□□□ -2.03
UBBP3-201ENST00000445497 TCOF1Q13428 1488 aaKnown RBP2.34□□□□□ -2.03
UBBP3-201ENST00000445497 CEP164Q9UPV0 1460 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 FER1L4A9Z1Z3 1794 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 SPEF2Q9C093 1822 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 TRGV11A0A075B6L2 103 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 TRAV5A0A0B4J249 113 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 TMEM269A0A1B0GVZ9 245 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 DUXBA0A1W2PPF3 345 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 hADV38S2A0JD32 116 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 LINC01553A4QN01 128 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 TMEM150BA6NC51 233 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 SRRM4A7MD48 611 aaKnown RBP2.34□□□□□ -2.03
UBBP3-201ENST00000445497 FOXI3A8MTJ6 420 aaPredicted RBP2.34□□□□□ -2.03
UBBP3-201ENST00000445497 C9JAW5 83 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 H3BMQ9 156 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 GFYI3L273 518 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 K7EPK0 472 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 NME4O00746 187 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 CDC42EP2O14613 210 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 PRRG2O14669 202 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 B4GALT3O60512 393 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 ZNF354AO60765 605 aaPredicted RBP2.34□□□□□ -2.03
UBBP3-201ENST00000445497 ICOSLGO75144 302 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 KCNK2O95069 426 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 SLC2A10O95528 541 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 OR2H2O95918 312 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 TBX6O95947 436 aaPredicted RBP2.34□□□□□ -2.03
UBBP3-201ENST00000445497 LALBAP00709 142 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 PTHP01270 115 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 AMBPP02760 352 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 MT-ND4LP03901 98 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 ALPLP05186 524 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 LGALS1P09382 135 aaKnown RBP2.34□□□□□ -2.03
UBBP3-201ENST00000445497 OR5AC1P0C628 307 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 SLC35G6P0C7Q6 338 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 AKAIN1P0CW23 69 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 CT45A10P0DMU9 189 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 TDGF1P13385 188 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 CNTFRP26992 372 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 IMPA1P29218 277 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 BLVRBP30043 206 aaPredicted RBP2.34□□□□□ -2.03
UBBP3-201ENST00000445497 MIPP30301 263 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 SRIP30626 198 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 GABRA3P34903 492 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 TGFBR1P36897 503 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 KIR2DS2P43631 304 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 POLR2HP52434 150 aaKnown RBP2.34□□□□□ -2.03
UBBP3-201ENST00000445497 C1QTNF8P60827 252 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 RND3P61587 244 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 SLC35A1P78382 337 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 HIST1H1AQ02539 215 aaPredicted RBP2.34□□□□□ -2.03
UBBP3-201ENST00000445497 HGFACQ04756 655 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 MXD1Q05195 221 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 RBM39Q14498 530 aaKnown RBP2.34□□□□□ -2.03
UBBP3-201ENST00000445497 SIX1Q15475 284 aaPredicted RBP2.34□□□□□ -2.03
UBBP3-201ENST00000445497 TIMM50Q3ZCQ8 353 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 ZNF404Q494X3 552 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 MESTQ5EB52 335 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 PYY3Q5JQD4 70 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 VAX1Q5SQQ9 334 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 ZNF684Q5T5D7 378 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 ZNF343Q6P1L6 599 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 TRMT10BQ6PF06 316 aaKnown RBP2.34□□□□□ -2.03
UBBP3-201ENST00000445497 ZNF66Q6ZN08 573 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 GDPGP1Q6ZNW5 385 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 FAM183BPQ6ZVS7 135 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 SNX29P2Q8IUI4 249 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 TMEM139Q8IV31 216 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 GAPTQ8N292 157 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 FAM71E2Q8N5Q1 922 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 KLHDC1Q8N7A1 406 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 SYT8Q8NBV8 401 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 RELL2Q8NC24 303 aaPredicted RBP2.34□□□□□ -2.03
UBBP3-201ENST00000445497 OR4M1Q8NGD0 313 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 OR4K5Q8NGD3 323 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 PPTC7Q8NI37 304 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 CT55Q8WUE5 264 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 SLC25A43Q8WUT9 341 aaPredicted RBP2.34□□□□□ -2.03
UBBP3-201ENST00000445497 GATAD1Q8WUU5 269 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 DYRK2Q92630 601 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 SLAMF6Q96DU3 332 aa2.34□□□□□ -2.03
UBBP3-201ENST00000445497 PAGE5Q96GU1 130 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms