RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 NLRC3Q7RTR2 1065 aa14.31□□□□□ -0.12
LIME1-202ENST00000444951 ST8SIA4Q92187 359 aa14.31□□□□□ -0.12
LIME1-202ENST00000444951 NEIL1Q96FI4 390 aaPredicted RBP14.31□□□□□ -0.12
LIME1-202ENST00000444951 MED30Q96HR3 178 aa14.31□□□□□ -0.12
LIME1-202ENST00000444951 SPATA2Q9UM82 520 aa14.31□□□□□ -0.12
LIME1-202ENST00000444951 MAB21L2Q9Y586 359 aa14.31□□□□□ -0.12
LIME1-202ENST00000444951 ETV7Q9Y603 341 aa14.31□□□□□ -0.12
LIME1-202ENST00000444951 TMEM82A0PJX8 343 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 DVL1O14640 695 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 SIGLEC5O15389 551 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 SOCS1O15524 211 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 NDUFB3O43676 98 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 WNT2P09544 360 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 NDUFB7P17568 137 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 RAB6AP20340 208 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 PITPNBP48739 271 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 LMO4P61968 165 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 PAN3Q58A45 887 aaKnown RBP14.3□□□□□ -0.12
LIME1-202ENST00000444951 NHLRC3Q5JS37 347 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 ATPAF1Q5TC12 328 aaPredicted RBP14.3□□□□□ -0.12
LIME1-202ENST00000444951 MZT2AQ6P582 158 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 BPIFB2Q8N4F0 458 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 ZNF561Q8N587 486 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 DTX3Q8N9I9 347 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 NEK7Q8TDX7 302 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 ACOT12Q8WYK0 555 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 KCTD12Q96CX2 325 aaKnown RBP14.3□□□□□ -0.12
LIME1-202ENST00000444951 RAB39BQ96DA2 213 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 SDSLQ96GA7 329 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 CYYR1Q96J86 154 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 MRI1Q9BV20 369 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 C6orf62Q9GZU0 229 aaPredicted RBP14.3□□□□□ -0.12
LIME1-202ENST00000444951 PPA2Q9H2U2 334 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 LPAR2Q9HBW0 351 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 RHBDL2Q9NX52 303 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 FBLN5Q9UBX5 448 aa14.3□□□□□ -0.12
LIME1-202ENST00000444951 A0A075B6Q4 140 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 TRAV24A0A0B4J272 114 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 METTL21EPA6NDL7 271 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 SLC33A1O00400 549 aaPredicted RBP14.29□□□□□ -0.12
LIME1-202ENST00000444951 RGS5O15539 181 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 PHF1O43189 567 aaPredicted RBP14.29□□□□□ -0.12
LIME1-202ENST00000444951 PSPNO60542 156 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 HPGDSO60760 199 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 TMEM127O75204 238 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 IFNA2P01563 188 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 FAM157CP0CG43 387 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 BLVRBP30043 206 aaPredicted RBP14.29□□□□□ -0.12
LIME1-202ENST00000444951 GNB2P62879 340 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 EDDM3AQ14507 147 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 MPV17LQ2QL34 196 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 ESCO2Q56NI9 601 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 LRRC10Q5BKY1 277 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 RAB12Q6IQ22 244 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 LINC00596Q86U02 117 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 RTN4RL2Q86UN3 420 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 SUMF2Q8NBJ7 301 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 CHST4Q8NCG5 386 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 OR4S1Q8NGB4 309 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 MCFD2Q8NI22 146 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 H1FXQ92522 213 aaKnown RBP14.29□□□□□ -0.12
LIME1-202ENST00000444951 SLC25A38Q96DW6 304 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 NEDD4LQ96PU5 975 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 TM2D1Q9BX74 207 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 DNTTIP1Q9H147 329 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 SLC25A10Q9UBX3 287 aaPredicted RBP14.29□□□□□ -0.12
LIME1-202ENST00000444951 CLN8Q9UBY8 286 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 PEX16Q9Y5Y5 336 aa14.29□□□□□ -0.12
LIME1-202ENST00000444951 UBE2QL1A1L167 161 aa14.28□□□□□ -0.12
LIME1-202ENST00000444951 FAM25AB3EWG3 89 aa14.28□□□□□ -0.12
LIME1-202ENST00000444951 FAM25CB3EWG5 89 aa14.28□□□□□ -0.12
LIME1-202ENST00000444951 FAM25GB3EWG6 89 aa14.28□□□□□ -0.12
LIME1-202ENST00000444951 F5H0A9 414 aaPredicted RBP14.28□□□□□ -0.12
LIME1-202ENST00000444951 SRSF2Q01130 221 aaKnown RBP14.28□□□□□ -0.12
LIME1-202ENST00000444951 MADCAM1Q13477 382 aa14.28□□□□□ -0.12
LIME1-202ENST00000444951 ATXN7L3Q14CW9 347 aaPredicted RBP14.28□□□□□ -0.12
LIME1-202ENST00000444951 GRK1Q15835 563 aa14.28□□□□□ -0.12
LIME1-202ENST00000444951 MOGAT2Q3SYC2 334 aa14.28□□□□□ -0.12
LIME1-202ENST00000444951 UBE2NLQ5JXB2 153 aa14.28□□□□□ -0.12
LIME1-202ENST00000444951 SIGIRRQ6IA17 410 aa14.28□□□□□ -0.12
LIME1-202ENST00000444951 C17orf107Q6ZR85 190 aa14.28□□□□□ -0.12
LIME1-202ENST00000444951 IL17RELQ6ZVW7 336 aa14.28□□□□□ -0.12
LIME1-202ENST00000444951 CMTM4Q8IZR5 234 aa14.28□□□□□ -0.12
LIME1-202ENST00000444951 OR56B1Q8NGI3 324 aa14.28□□□□□ -0.12
LIME1-202ENST00000444951 PTX4Q96A99 478 aa14.28□□□□□ -0.12
LIME1-202ENST00000444951 PHF21AQ96BD5 680 aa14.28□□□□□ -0.12
LIME1-202ENST00000444951 SNX22Q96L94 193 aa14.28□□□□□ -0.12
LIME1-202ENST00000444951 DPCDQ9BVM2 203 aaPredicted RBP14.28□□□□□ -0.12
LIME1-202ENST00000444951 SLIRPQ9GZT3 109 aaKnown RBP14.28□□□□□ -0.12
LIME1-202ENST00000444951 KAAG1Q9UBP8 84 aa14.28□□□□□ -0.12
LIME1-202ENST00000444951 CDC42EP3Q9UKI2 254 aa14.28□□□□□ -0.12
LIME1-202ENST00000444951 FAM157AC9JC47 383 aa14.27□□□□□ -0.13
LIME1-202ENST00000444951 CTDSP2O14595 271 aa14.27□□□□□ -0.13
LIME1-202ENST00000444951 PDCD6O75340 191 aa14.27□□□□□ -0.13
LIME1-202ENST00000444951 ZNF737O75373 536 aa14.27□□□□□ -0.13
LIME1-202ENST00000444951 FCN3O75636 299 aa14.27□□□□□ -0.13
LIME1-202ENST00000444951 TK1P04183 234 aa14.27□□□□□ -0.13
LIME1-202ENST00000444951 EIF4EP06730 217 aaKnown RBP14.27□□□□□ -0.13
LIME1-202ENST00000444951 FUT3P21217 361 aa14.27□□□□□ -0.13
LIME1-202ENST00000444951 OR3A1P47881 315 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms