RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 SMIM4Q8WVI0 70 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 ARPC5LQ9BPX5 153 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 ST6GALNAC2Q9UJ37 374 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 SSUH2Q9Y2M2 353 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 WIPI2Q9Y4P8 454 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 NCBP2LA6PVI3 153 aaKnown RBP12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 GEMIN2O14893 280 aaKnown RBP12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 GZMHP20718 246 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 RAB13P51153 203 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 SUB1P53999 127 aaKnown RBP eCLIP12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 PDLIM3Q53GG5 364 aaPredicted RBP12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 SHEQ5VZ18 495 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 NAA40Q86UY6 237 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 MARC2Q969Z3 335 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 SEC22AQ96IW7 307 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 TMEM68Q96MH6 324 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 PIMREGQ9BSJ6 248 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 NMNAT2Q9BZQ4 307 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 C20orf85Q9H1P6 137 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 PSG11Q9UQ72 335 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 TXNL1O43396 289 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 SSX4O60224 188 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 IL18BPO95998 194 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 PI3P19957 117 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 KLK2P20151 261 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 SNAI3Q3KNW1 292 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 RPUSD3Q6P087 351 aaKnown RBP12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 NPAS1Q99742 590 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 SMCO4Q9NRQ5 59 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 IGHV3-43A0A0B4J1X8 118 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 ZNF716A6NP11 495 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 CTAG2O75638 210 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 IGHV3-43DP0DP04 118 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 GFRA1P56159 465 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 ENDOGQ14249 297 aaKnown RBP12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 IRF3Q14653 427 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 FAM209AQ5JX71 171 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 ARRDC1Q8N5I2 433 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 ASB13Q8WXK3 278 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 SSX3Q99909 188 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 KLK11Q9UBX7 282 aa12.2□□□□□ -0.46
SMARCA4-204ENST00000444061 AKR1C1Q04828 323 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 PLA1AQ53H76 456 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 GPX8Q8TED1 209 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 SLC25A10Q9UBX3 287 aaPredicted RBP12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 POM121CA8CG34 1229 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 POFUT1Q9H488 388 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 PLXNA2O75051 1894 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 SEMA7AO75326 666 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 GABRB1P18505 474 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 PRDX2P32119 198 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 PDLIM4P50479 330 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 SSX2Q16385 188 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 IGFL3Q6UXB1 125 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 CCDC190Q86UF4 302 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 SUMF2Q8NBJ7 301 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 OR4S1Q8NGB4 309 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 MARCH1Q8TCQ1 289 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 RTN4IP1Q8WWV3 396 aaPredicted RBP12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 TAAR6Q96RI8 345 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 ZNF230Q9UIE0 474 aaPredicted RBP12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 CLDN16Q9Y5I7 305 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 EFNA2O43921 213 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 RPL31P62899 125 aaKnown RBP12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 VMA21Q3ZAQ7 101 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 GGNQ86UU5 652 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 ZNF680Q8NEM1 530 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 ZNF488Q96MN9 340 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 ZNF75AQ96N20 296 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 SLC25A32Q9H2D1 315 aa12.19□□□□□ -0.46
SMARCA4-204ENST00000444061 TMEM200CA6NKL6 621 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 CA11O75493 328 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 IGHG3P01860 377 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 BRS3P32247 399 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 PLA2G5P39877 138 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 FOXF2Q12947 444 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 FAAP20Q6NZ36 180 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 ZNF837Q96EG3 531 aaPredicted RBP12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 AKR1E2Q96JD6 320 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 AP1S3Q96PC3 154 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 CCL13Q99616 98 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 SMIM3Q9BZL3 60 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 IGKV1D-43A0A0B4J1Z2 117 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 GPR31O00270 319 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 BAMBIQ13145 260 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 IGF2-ASQ6U949 168 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 ZNF826PQ6ZT77 177 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 TMEM123Q8N131 208 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 LRRC75AQ8NAA5 344 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 SLIRPQ9GZT3 109 aaKnown RBP12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 LPAR3Q9UBY5 353 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 PIGPP57054 158 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 GPR157Q5UAW9 335 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 TMUB2Q71RG4 321 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 RGS13O14921 159 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 NDUFA2O43678 99 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 IGHV3-13P01766 116 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 IGHV3-7P01780 117 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 S100A8P05109 93 aa12.18□□□□□ -0.46
SMARCA4-204ENST00000444061 OMGP23515 440 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms