RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 IFNA2P01563 188 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 CHRNB4P30926 498 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 FCGR2CP31995 323 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 HLA-DRB3P79483 266 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 PPP1R1AQ13522 171 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 C6orf183Q5T699 404 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 KCTD9Q7L273 389 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 OR4A4PQ8NGN8 299 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 TOMM40LQ969M1 308 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 FAM122AQ96E09 287 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 KIRREL1Q96J84 757 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 OR2A7Q96R45 310 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 TMEM246Q9BRR3 403 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 HDHD3Q9BSH5 251 aaPredicted RBP5.13□□□□□ -1.59
VPS50-205ENST00000441602 TMPRSS13Q9BYE2 586 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 EGLN1Q9GZT9 426 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 ZFP57Q9NU63 452 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 CRIM1Q9NZV1 1036 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 TRAPPC2LQ9UL33 140 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 ZDHHC8Q9ULC8 765 aa5.13□□□□□ -1.59
VPS50-205ENST00000441602 FAM221AA4D161 298 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 FAM25EA8MYX2 175 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 SIRPB1O00241 398 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 HS3ST1O14792 307 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 LILRA1O75019 489 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 PET100P0DJ07 73 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 TNFRSF1AP19438 455 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 BATF2Q8N1L9 274 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 OR5M8Q8NGP6 311 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 LILRB1Q8NHL6 650 aaPredicted RBP5.12□□□□□ -1.59
VPS50-205ENST00000441602 THAP6Q8TBB0 222 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 LRRC29Q8WV35 223 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 DMRTA2Q96SC8 542 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 SUCNR1Q9BXA5 334 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 DNTTIP1Q9H147 329 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 TLNRD1Q9H1K6 362 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 METTL8Q9H825 291 aaKnown RBP5.12□□□□□ -1.59
VPS50-205ENST00000441602 SEBOXQ9HB31 216 aaPredicted RBP5.12□□□□□ -1.59
VPS50-205ENST00000441602 RAB18Q9NP72 206 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 OR14J1Q9UGF5 321 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 PCDHB10Q9UN67 800 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 CCL21O00585 134 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 NAPSAO96009 420 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 HLA-GP17693 338 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 CXCL3P19876 107 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 DUSP1P28562 367 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 ZNF81P51508 661 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 FXYD4P59646 89 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 ERVK11-1P61568 191 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 NKX6-1P78426 367 aaPredicted RBP5.12□□□□□ -1.59
VPS50-205ENST00000441602 SMCO1Q147U7 214 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 ZNF146Q15072 292 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 PDCD1Q15116 288 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 ALKBH6Q3KRA9 238 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 PRR30Q53SZ7 412 aaPredicted RBP5.12□□□□□ -1.59
VPS50-205ENST00000441602 DHRS11Q6UWP2 260 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 ZNF767PQ75MW2 155 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 CMTM1Q8IZ96 169 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 PRR7Q8TB68 274 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 RNASE6Q93091 150 aaKnown RBP5.12□□□□□ -1.59
VPS50-205ENST00000441602 MRPL24Q96A35 216 aaKnown RBP5.12□□□□□ -1.59
VPS50-205ENST00000441602 MOB3AQ96BX8 217 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 ZNF488Q96MN9 340 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 WDR13Q9H1Z4 485 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 UFSP2Q9NUQ7 469 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 JKAMPQ9P055 326 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 FZR1Q9UM11 496 aa5.12□□□□□ -1.59
VPS50-205ENST00000441602 RBM7Q9Y580 266 aaKnown RBP5.12□□□□□ -1.59
VPS50-205ENST00000441602 FXYD6-FXYD2A0A087WZ82 144 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 LRRC30A6NM36 301 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 M0R233 179 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 HSPA12AO43301 675 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 OR2H2O95918 312 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 APC2O95996 2303 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 TNFAIP6P98066 277 aaPredicted RBP5.11□□□□□ -1.59
VPS50-205ENST00000441602 DHODHQ02127 395 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 ACACAQ13085 2346 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 SLC9A3R2Q15599 337 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 PRAMEF6Q5VXH4 476 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 C17orf107Q6ZR85 190 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 LGI3Q8N145 548 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 RELL2Q8NC24 303 aaPredicted RBP5.11□□□□□ -1.59
VPS50-205ENST00000441602 MEGF10Q96KG7 1140 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 FXYD6Q9H0Q3 95 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 MSL2Q9HCI7 577 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 GTF3C1Q12789 2109 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 IGLV3-9A0A075B6K5 115 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 OR5H14A6NHG9 310 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 BET1O15155 118 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 MLNRO43193 412 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 B3GALNT1O75752 331 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 RHBDL1O75783 438 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 CD3EP07766 207 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 Q6P435 159 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 BRICD5Q6PL45 260 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 ACP7Q6ZNF0 438 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 RTN4RL2Q86UN3 420 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 C1orf87Q8N0U7 546 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 OR10J5Q8NHC4 309 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 NINJ1Q92982 152 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms