RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 SMIM4Q8WVI0 70 aa17.61■□□□□ 0.41
VPS13B-204ENST00000441350 GSX2Q9BZM3 304 aa17.61■□□□□ 0.41
VPS13B-204ENST00000441350 DNTTIP1Q9H147 329 aa17.61■□□□□ 0.41
VPS13B-204ENST00000441350 MYOZ1Q9NP98 299 aaPredicted RBP17.61■□□□□ 0.41
VPS13B-204ENST00000441350 MAB21L2Q9Y586 359 aa17.61■□□□□ 0.41
VPS13B-204ENST00000441350 GABARAPH6UMI1 98 aa17.6■□□□□ 0.41
VPS13B-204ENST00000441350 MDH2P40926 338 aaKnown RBP17.6■□□□□ 0.41
VPS13B-204ENST00000441350 ATP5J2P56134 94 aa17.6■□□□□ 0.41
VPS13B-204ENST00000441350 DGCR2P98153 550 aa17.6■□□□□ 0.41
VPS13B-204ENST00000441350 GUCA2AQ02747 115 aa17.6■□□□□ 0.41
VPS13B-204ENST00000441350 SHEQ5VZ18 495 aa17.6■□□□□ 0.41
VPS13B-204ENST00000441350 C17orf107Q6ZR85 190 aa17.6■□□□□ 0.41
VPS13B-204ENST00000441350 BPIFB2Q8N4F0 458 aa17.6■□□□□ 0.41
VPS13B-204ENST00000441350 GPX8Q8TED1 209 aa17.6■□□□□ 0.41
VPS13B-204ENST00000441350 RAB1CQ92928 201 aa17.6■□□□□ 0.41
VPS13B-204ENST00000441350 GAFA1Q96PS6 74 aa17.6■□□□□ 0.41
VPS13B-204ENST00000441350 TMEM246Q9BRR3 403 aa17.6■□□□□ 0.41
VPS13B-204ENST00000441350 SCPEP1Q9HB40 452 aa17.6■□□□□ 0.41
VPS13B-204ENST00000441350 BARX1Q9HBU1 254 aaPredicted RBP17.6■□□□□ 0.41
VPS13B-204ENST00000441350 AK3Q9UIJ7 227 aa17.6■□□□□ 0.41
VPS13B-204ENST00000441350 UBE2QL1A1L167 161 aa17.59■□□□□ 0.41
VPS13B-204ENST00000441350 SULT1C2O00338 296 aa17.59■□□□□ 0.41
VPS13B-204ENST00000441350 HSPB6O14558 160 aa17.59■□□□□ 0.41
VPS13B-204ENST00000441350 PPIHO43447 177 aaKnown RBP17.59■□□□□ 0.41
VPS13B-204ENST00000441350 SSX4O60224 188 aa17.59■□□□□ 0.41
VPS13B-204ENST00000441350 SSX5O60225 188 aa17.59■□□□□ 0.41
VPS13B-204ENST00000441350 RBM39Q14498 530 aaKnown RBP17.59■□□□□ 0.41
VPS13B-204ENST00000441350 KCNJ8Q15842 424 aa17.59■□□□□ 0.41
VPS13B-204ENST00000441350 ZNF561Q8N587 486 aa17.59■□□□□ 0.41
VPS13B-204ENST00000441350 ZNF525Q8N782 197 aa17.59■□□□□ 0.41
VPS13B-204ENST00000441350 OR52I2Q8NH67 350 aa17.59■□□□□ 0.41
VPS13B-204ENST00000441350 TIMD4Q96H15 378 aa17.59■□□□□ 0.41
VPS13B-204ENST00000441350 CCL13Q99616 98 aa17.59■□□□□ 0.41
VPS13B-204ENST00000441350 CCDC32Q9BV29 185 aa17.59■□□□□ 0.41
VPS13B-204ENST00000441350 SHARPINQ9H0F6 387 aa17.59■□□□□ 0.41
VPS13B-204ENST00000441350 ZNF665Q9H7R5 613 aa17.59■□□□□ 0.41
VPS13B-204ENST00000441350 EDARQ9UNE0 448 aa17.59■□□□□ 0.41
VPS13B-204ENST00000441350 ARID1AO14497 2285 aa17.59■□□□□ 0.41
VPS13B-204ENST00000441350 NDUFA2O43678 99 aa17.58■□□□□ 0.41
VPS13B-204ENST00000441350 GIFP27352 417 aa17.58■□□□□ 0.41
VPS13B-204ENST00000441350 OR3A1P47881 315 aa17.58■□□□□ 0.41
VPS13B-204ENST00000441350 GNG2P59768 71 aa17.58■□□□□ 0.41
VPS13B-204ENST00000441350 ARFRP1Q13795 201 aa17.58■□□□□ 0.41
VPS13B-204ENST00000441350 BAK1Q16611 211 aa17.58■□□□□ 0.41
VPS13B-204ENST00000441350 OR4S1Q8NGB4 309 aa17.58■□□□□ 0.41
VPS13B-204ENST00000441350 NUDCD2Q8WVJ2 157 aa17.58■□□□□ 0.41
VPS13B-204ENST00000441350 FCAMRQ8WWV6 532 aa17.58■□□□□ 0.41
VPS13B-204ENST00000441350 DYRK2Q92630 601 aa17.58■□□□□ 0.41
VPS13B-204ENST00000441350 PPA2Q9H2U2 334 aa17.58■□□□□ 0.41
VPS13B-204ENST00000441350 K7N7A8 449 aa17.58■□□□□ 0.4
VPS13B-204ENST00000441350 SIGLEC5O15389 551 aa17.58■□□□□ 0.4
VPS13B-204ENST00000441350 LPLP06858 475 aa17.58■□□□□ 0.4
VPS13B-204ENST00000441350 CSF3P09919 207 aa17.58■□□□□ 0.4
VPS13B-204ENST00000441350 AVPI1Q5T686 147 aa17.58■□□□□ 0.4
VPS13B-204ENST00000441350 DCDC5Q6ZRR9 648 aa17.58■□□□□ 0.4
VPS13B-204ENST00000441350 ASCC1Q8N9N2 400 aaKnown RBP17.58■□□□□ 0.4
VPS13B-204ENST00000441350 ZNRF1Q8ND25 227 aa17.58■□□□□ 0.4
VPS13B-204ENST00000441350 NEK7Q8TDX7 302 aa17.58■□□□□ 0.4
VPS13B-204ENST00000441350 SNX22Q96L94 193 aa17.58■□□□□ 0.4
VPS13B-204ENST00000441350 THAP7Q9BT49 309 aaPredicted RBP17.58■□□□□ 0.4
VPS13B-204ENST00000441350 KAAG1Q9UBP8 84 aa17.58■□□□□ 0.4
VPS13B-204ENST00000441350 RBMX2Q9Y388 322 aaKnown RBP17.58■□□□□ 0.4
VPS13B-204ENST00000441350 POLQO75417 2590 aa17.57■□□□□ 0.4
VPS13B-204ENST00000441350 NBPF19A0A087WUL8 3843 aa17.57■□□□□ 0.4
VPS13B-204ENST00000441350 A0A1B0GW55 424 aa17.57■□□□□ 0.4
VPS13B-204ENST00000441350 NKX6-3A6NJ46 265 aa17.57■□□□□ 0.4
VPS13B-204ENST00000441350 CSN2P05814 226 aa17.57■□□□□ 0.4
VPS13B-204ENST00000441350 CD3GP09693 182 aa17.57■□□□□ 0.4
VPS13B-204ENST00000441350 DUX4L2P0CJ85 424 aa17.57■□□□□ 0.4
VPS13B-204ENST00000441350 DUX4L3P0CJ86 424 aa17.57■□□□□ 0.4
VPS13B-204ENST00000441350 DUX4L4P0CJ87 422 aa17.57■□□□□ 0.4
VPS13B-204ENST00000441350 DUX4L5P0CJ88 424 aa17.57■□□□□ 0.4
VPS13B-204ENST00000441350 DUX4L6P0CJ89 424 aa17.57■□□□□ 0.4
VPS13B-204ENST00000441350 DUX4L7P0CJ90 424 aa17.57■□□□□ 0.4
VPS13B-204ENST00000441350 KCNJ3P48549 501 aa17.57■□□□□ 0.4
VPS13B-204ENST00000441350 IL13RA1P78552 427 aa17.57■□□□□ 0.4
VPS13B-204ENST00000441350 CARTPTQ16568 116 aa17.57■□□□□ 0.4
VPS13B-204ENST00000441350 TMEM155Q4W5P6 130 aa17.57■□□□□ 0.4
VPS13B-204ENST00000441350 RNASE12Q5GAN4 147 aaKnown RBP17.57■□□□□ 0.4
VPS13B-204ENST00000441350 DUX4L9Q6RFH8 374 aaPredicted RBP17.57■□□□□ 0.4
VPS13B-204ENST00000441350 LYPD2Q6UXB3 125 aa17.57■□□□□ 0.4
VPS13B-204ENST00000441350 MUC20Q8N307 709 aaPredicted RBP17.57■□□□□ 0.4
VPS13B-204ENST00000441350 BORCS5Q969J3 196 aa17.57■□□□□ 0.4
VPS13B-204ENST00000441350 TRIM63Q969Q1 353 aa17.57■□□□□ 0.4
VPS13B-204ENST00000441350 PERPQ96FX8 193 aa17.57■□□□□ 0.4
VPS13B-204ENST00000441350 CMSS1Q9BQ75 279 aaKnown RBP17.57■□□□□ 0.4
VPS13B-204ENST00000441350 HDHD3Q9BSH5 251 aaPredicted RBP17.57■□□□□ 0.4
VPS13B-204ENST00000441350 CHST6Q9GZX3 395 aa17.57■□□□□ 0.4
VPS13B-204ENST00000441350 DUX4Q9UBX2 424 aa17.57■□□□□ 0.4
VPS13B-204ENST00000441350 UNC79Q9P2D8 2635 aa17.56■□□□□ 0.4
VPS13B-204ENST00000441350 TMPRSS2O15393 492 aa17.56■□□□□ 0.4
VPS13B-204ENST00000441350 LANCL1O43813 399 aa17.56■□□□□ 0.4
VPS13B-204ENST00000441350 NAPSAO96009 420 aa17.56■□□□□ 0.4
VPS13B-204ENST00000441350 SELLP14151 372 aa17.56■□□□□ 0.4
VPS13B-204ENST00000441350 GPR6P46095 362 aaPredicted RBP17.56■□□□□ 0.4
VPS13B-204ENST00000441350 PDLIM4P50479 330 aa17.56■□□□□ 0.4
VPS13B-204ENST00000441350 PAX5Q02548 391 aa17.56■□□□□ 0.4
VPS13B-204ENST00000441350 SLC36A1Q7Z2H8 476 aa17.56■□□□□ 0.4
VPS13B-204ENST00000441350 TRAPPC6BQ86SZ2 158 aa17.56■□□□□ 0.4
VPS13B-204ENST00000441350 OR8H2Q8N162 312 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms