RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 MARS2Q96GW9 593 aaKnown RBP12.32□□□□□ -0.44
TNFRSF1A-204ENST00000440083 FOXC2Q99958 501 aa12.32□□□□□ -0.44
TNFRSF1A-204ENST00000440083 GHITMQ9H3K2 345 aa12.32□□□□□ -0.44
TNFRSF1A-204ENST00000440083 PLK3Q9H4B4 646 aa12.32□□□□□ -0.44
TNFRSF1A-204ENST00000440083 SLC2A8Q9NY64 477 aa12.32□□□□□ -0.44
TNFRSF1A-204ENST00000440083 PURGQ9UJV8 347 aaKnown RBP12.32□□□□□ -0.44
TNFRSF1A-204ENST00000440083 POLDIP2Q9Y2S7 368 aa12.32□□□□□ -0.44
TNFRSF1A-204ENST00000440083 HIVEP1P15822 2718 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 TMEM82A0PJX8 343 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 UBE2QL1A1L167 161 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 TMEM210A6NLX4 147 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 CREBL2O60519 120 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 OR7C1O76099 320 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 PMP2P02689 132 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 ANXA7P20073 488 aaKnown RBP12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 MPZP25189 248 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 MPV17P39210 176 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 OR3A3P47888 321 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 MECP2P51608 486 aaKnown RBP12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 SNU13P55769 128 aaKnown RBP12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 ATP5J2P56134 94 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 RPS23P62266 143 aaKnown RBP12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 IL24Q13007 206 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 PSG7Q13046 419 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 MAB21L1Q13394 359 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 TESK1Q15569 626 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 EFNB3Q15768 340 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 ALKBH6Q3KRA9 238 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 ELP2Q6IA86 826 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 RGS7BPQ6MZT1 257 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 GLDNQ6ZMI3 551 aaPredicted RBP12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 LINC00596Q86U02 117 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 TMEM17Q86X19 198 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 BATF2Q8N1L9 274 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 BEST4Q8NFU0 473 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 GTF3AQ92664 365 aaKnown RBP12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 ST6GAL2Q96JF0 529 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 CMSS1Q9BQ75 279 aaKnown RBP12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 ST6GALNAC5Q9BVH7 336 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 GSX2Q9BZM3 304 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 TMEM100Q9NV29 134 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 DUSP13Q9UII6 198 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 ACANP16112 2415 aa12.31□□□□□ -0.44
TNFRSF1A-204ENST00000440083 B9A039 149 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 IGHV4-39P01824 125 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 ZNF735P0CB33 412 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 PRKACAP17612 351 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 KITLGP21583 273 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 DTYMKP23919 212 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 ARPC4P59998 168 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 SNRPD2P62316 118 aaKnown RBP12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 MZT1Q08AG7 82 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 FCN2Q15485 313 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 MPV17LQ2QL34 196 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 CHRFAM7AQ494W8 412 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 NHLRC3Q5JS37 347 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 VAX1Q5SQQ9 334 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 Q8IYB0 196 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 ZCCHC24Q8N2G6 241 aaKnown RBP12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 Q8NFD4 153 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 OR8G5Q8NG78 346 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 OR10AD1Q8NGE0 317 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 SNAPC3Q92966 411 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 DMRTB1Q96MA1 342 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 SLC6A7Q99884 636 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 SEC22CQ9BRL7 303 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 CHST6Q9GZX3 395 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 CXXC4Q9H2H0 198 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 OR51I2Q9H344 312 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 RHOFQ9HBH0 211 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 RANGRFQ9HD47 186 aaPredicted RBP12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 ZNF69Q9UC07 566 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 AK3Q9UIJ7 227 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 ZNF222Q9UK12 451 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 F8P00451 2351 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 CELSR1Q9NYQ6 3014 aa12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 TEP1Q99973 2627 aaKnown RBP12.3□□□□□ -0.44
TNFRSF1A-204ENST00000440083 SNRPGP15A8MWD9 76 aa12.29□□□□□ -0.44
TNFRSF1A-204ENST00000440083 TPD52L2O43399 206 aaKnown RBP12.29□□□□□ -0.44
TNFRSF1A-204ENST00000440083 SYNGR1O43759 233 aa12.29□□□□□ -0.44
TNFRSF1A-204ENST00000440083 LY6HO94772 140 aa12.29□□□□□ -0.44
TNFRSF1A-204ENST00000440083 ANXA3P12429 323 aa12.29□□□□□ -0.44
TNFRSF1A-204ENST00000440083 PAX1P15863 534 aa12.29□□□□□ -0.44
TNFRSF1A-204ENST00000440083 FUT3P21217 361 aa12.29□□□□□ -0.44
TNFRSF1A-204ENST00000440083 NPBWR2P48146 333 aa12.29□□□□□ -0.44
TNFRSF1A-204ENST00000440083 TSPAN5P62079 268 aa12.29□□□□□ -0.44
TNFRSF1A-204ENST00000440083 IKZF1Q13422 519 aa12.29□□□□□ -0.44
TNFRSF1A-204ENST00000440083 MICBQ29980 383 aa12.29□□□□□ -0.44
TNFRSF1A-204ENST00000440083 Q5PR19 223 aa12.29□□□□□ -0.44
TNFRSF1A-204ENST00000440083 MBNL2Q5VZF2 373 aaKnown RBP12.29□□□□□ -0.44
TNFRSF1A-204ENST00000440083 SIGIRRQ6IA17 410 aa12.29□□□□□ -0.44
TNFRSF1A-204ENST00000440083 TMED4Q7Z7H5 227 aa12.29□□□□□ -0.44
TNFRSF1A-204ENST00000440083 TCTE3Q8IZS6 198 aa12.29□□□□□ -0.44
TNFRSF1A-204ENST00000440083 ARRDC1Q8N5I2 433 aa12.29□□□□□ -0.44
TNFRSF1A-204ENST00000440083 ZDHHC22Q8N966 263 aa12.29□□□□□ -0.44
TNFRSF1A-204ENST00000440083 WFDC11Q8NEX6 87 aa12.29□□□□□ -0.44
TNFRSF1A-204ENST00000440083 MED30Q96HR3 178 aa12.29□□□□□ -0.44
TNFRSF1A-204ENST00000440083 SULT4A1Q9BR01 284 aa12.29□□□□□ -0.44
TNFRSF1A-204ENST00000440083 FAAP24Q9BTP7 215 aa12.29□□□□□ -0.44
TNFRSF1A-204ENST00000440083 SPACA1Q9HBV2 294 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms