RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 TBL2Q9Y4P3 447 aaKnown RBP8.55□□□□□ -1.04
MCF2L-216ENST00000439475 SVEP1Q4LDE5 3571 aa8.55□□□□□ -1.04
MCF2L-216ENST00000439475 CUBNO60494 3623 aa8.55□□□□□ -1.04
MCF2L-216ENST00000439475 ATRQ13535 2644 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 RGS10O43665 173 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 IGHV4-59P01825 116 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 CSN2P05814 226 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 IGHV1-8P0DP01 117 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 IGFBP3P17936 291 aaPredicted RBP8.54□□□□□ -1.04
MCF2L-216ENST00000439475 COX7A1P24310 79 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 OR3A1P47881 315 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 KCNJ3P48549 501 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 AESQ08117 197 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 DYNC1I2Q13409 638 aaKnown RBP8.54□□□□□ -1.04
MCF2L-216ENST00000439475 GPR50Q13585 617 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 DOC2BQ14184 412 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 KRBOX4Q5JUW0 171 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 Q6P435 159 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 ASCL4Q6XD76 172 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 ZNF782Q6ZMW2 699 aaPredicted RBP8.54□□□□□ -1.04
MCF2L-216ENST00000439475 RNF144BQ7Z419 303 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 OSR2Q8N2R0 312 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 TPRX1Q8N7U7 411 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 ZNF565Q8N9K5 539 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 Q8NFD4 153 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 OR51T1Q8NGJ9 327 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 OR13C5Q8NGS8 318 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 CORO2AQ92828 525 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 OR14A2Q96R54 314 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 ZNF184Q99676 751 aaPredicted RBP8.54□□□□□ -1.04
MCF2L-216ENST00000439475 SSX3Q99909 188 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 ANKRD60Q9BZ19 345 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 CHIAQ9BZP6 476 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 CCDC90BQ9GZT6 254 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 PPA2Q9H2U2 334 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 TCF7L1Q9HCS4 588 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 IL36GQ9NZH8 169 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 OR6C3Q9NZP0 311 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 BLOC1S6Q9UL45 172 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 SESN1Q9Y6P5 492 aa8.54□□□□□ -1.04
MCF2L-216ENST00000439475 DSCAML1Q8TD84 2053 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 A0A1W2PPK0 400 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 SLC33A1O00400 549 aaPredicted RBP8.53□□□□□ -1.04
MCF2L-216ENST00000439475 GPR137BO60478 399 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 MAS1P04201 325 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 ARG1P05089 322 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 GTF2F2P13984 249 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 FSTP19883 344 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 SERPINA2P20848 420 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 RANBP1P43487 201 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 OR3A4PP47883 348 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 DLX6P56179 175 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 RPS11P62280 158 aaKnown RBP eCLIP8.53□□□□□ -1.04
MCF2L-216ENST00000439475 SLC35A2P78381 396 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 AANATQ16613 207 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 MPV17LQ2QL34 196 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 ACSM3Q53FZ2 586 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 PAN3Q58A45 887 aaKnown RBP8.53□□□□□ -1.04
MCF2L-216ENST00000439475 RBM48Q5RL73 367 aaKnown RBP8.53□□□□□ -1.04
MCF2L-216ENST00000439475 DHRS7BQ6IAN0 325 aaPredicted RBP8.53□□□□□ -1.04
MCF2L-216ENST00000439475 ASPHD2Q6ICH7 369 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 HCP5Q6MZN7 132 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 CRIP3Q6Q6R5 217 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 SHISA2Q6UWI4 295 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 IZUMO2Q6UXV1 221 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 LINC00596Q86U02 117 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 RTN4RL2Q86UN3 420 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 JAGN1Q8N5M9 183 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 NKAIN3Q8N8D7 197 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 OR11H6Q8NGC7 330 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 OR4D6Q8NGJ1 314 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 UFD1Q92890 307 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 FOXRED1Q96CU9 486 aaPredicted RBP8.53□□□□□ -1.04
MCF2L-216ENST00000439475 MALSU1Q96EH3 234 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 MRPS24Q96EL2 167 aaKnown RBP8.53□□□□□ -1.04
MCF2L-216ENST00000439475 ZNF747Q9BV97 191 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 NCOR1P1Q9H4R4 102 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 DUSP21Q9H596 190 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 RAB18Q9NP72 206 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 ABCB10Q9NRK6 738 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 VPREB3Q9UKI3 123 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 RAB26Q9ULW5 256 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 ST3GAL6Q9Y274 331 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 MMP24Q9Y5R2 645 aa8.53□□□□□ -1.04
MCF2L-216ENST00000439475 TRBV5-7A0A0A0MS05 114 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 ODAMA1E959 279 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 ZNF729A6NN14 1252 aaPredicted RBP8.52□□□□□ -1.05
MCF2L-216ENST00000439475 OR7C1O76099 320 aaPredicted RBP8.52□□□□□ -1.05
MCF2L-216ENST00000439475 CDRT1O95170 752 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 NDUFA7O95182 113 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 ATP6V1G2O95670 118 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 VHLP40337 213 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 GLIPR1P48060 266 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 RAG2P55895 527 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 TRAM1Q15629 374 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 LRRC75BQ2VPJ9 315 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 KIAA2026Q5HYC2 2103 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 MINOS1Q5TGZ0 78 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 GLT8D1Q68CQ7 371 aa8.52□□□□□ -1.05
MCF2L-216ENST00000439475 ZNF626Q68DY1 528 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms