RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 UMODP07911 640 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 GABRA4P48169 554 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 PSMB3P49720 205 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 NFAM1Q8NET5 270 aaPredicted RBP10.72□□□□□ -0.69
TCOF1-205ENST00000439160 FDCSPQ8NFU4 85 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 OR11H7Q8NGC8 314 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 OR5M8Q8NGP6 311 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 IMMP1LQ96LU5 166 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 UHRF2Q96PU4 802 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 NKX6-2Q9C056 277 aaPredicted RBP10.72□□□□□ -0.69
TCOF1-205ENST00000439160 AMDHD2Q9Y303 409 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 CACNA1BQ00975 2339 aa10.71□□□□□ -0.69
TCOF1-205ENST00000439160 IGLV3-12A0A075B6K2 115 aa10.71□□□□□ -0.69
TCOF1-205ENST00000439160 SCAF4O95104 1147 aaKnown RBP10.71□□□□□ -0.69
TCOF1-205ENST00000439160 FSTP19883 344 aa10.71□□□□□ -0.69
TCOF1-205ENST00000439160 HTD2P86397 168 aa10.71□□□□□ -0.69
TCOF1-205ENST00000439160 FOXO1Q12778 655 aa10.71□□□□□ -0.69
TCOF1-205ENST00000439160 SNAI3Q3KNW1 292 aa10.71□□□□□ -0.69
TCOF1-205ENST00000439160 HIST2H3PS2Q5TEC6 136 aa10.71□□□□□ -0.69
TCOF1-205ENST00000439160 NANPQ8TBE9 248 aa10.71□□□□□ -0.69
TCOF1-205ENST00000439160 OPN3Q9H1Y3 402 aaPredicted RBP10.71□□□□□ -0.69
TCOF1-205ENST00000439160 RASL12Q9NYN1 266 aa10.71□□□□□ -0.69
TCOF1-205ENST00000439160 CD37P11049 281 aa10.71□□□□□ -0.69
TCOF1-205ENST00000439160 LPAR6P43657 344 aa10.71□□□□□ -0.69
TCOF1-205ENST00000439160 HFEQ30201 348 aa10.71□□□□□ -0.69
TCOF1-205ENST00000439160 TAAR6Q96RI8 345 aa10.71□□□□□ -0.69
TCOF1-205ENST00000439160 URGCP-MRPS24S4R325 110 aa10.71□□□□□ -0.69
TCOF1-205ENST00000439160 PLXNA3P51805 1871 aa10.71□□□□□ -0.7
TCOF1-205ENST00000439160 A0A0G2JMM0 328 aa10.71□□□□□ -0.7
TCOF1-205ENST00000439160 A0A1W2PPB8 328 aa10.71□□□□□ -0.7
TCOF1-205ENST00000439160 A0A1W2PRS3 328 aa10.71□□□□□ -0.7
TCOF1-205ENST00000439160 KIR3DP1A8MWS1 328 aa10.71□□□□□ -0.7
TCOF1-205ENST00000439160 ADIRFQ15847 76 aa10.71□□□□□ -0.7
TCOF1-205ENST00000439160 TIPARPQ7Z3E1 657 aaKnown RBP10.71□□□□□ -0.7
TCOF1-205ENST00000439160 SLC35E1Q96K37 410 aa10.71□□□□□ -0.7
TCOF1-205ENST00000439160 CIB3Q96Q77 187 aaPredicted RBP10.71□□□□□ -0.7
TCOF1-205ENST00000439160 KCNIP2Q9NS61 270 aa10.71□□□□□ -0.7
TCOF1-205ENST00000439160 FAM206AQ9NX38 181 aa10.71□□□□□ -0.7
TCOF1-205ENST00000439160 KLK13Q9UKR3 277 aa10.71□□□□□ -0.7
TCOF1-205ENST00000439160 LEUTXA8MZ59 168 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 TMPRSS2O15393 492 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 SUB1P53999 127 aaKnown RBP eCLIP10.7□□□□□ -0.7
TCOF1-205ENST00000439160 CSRP2Q16527 193 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 TMEM211Q6ICI0 200 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 C9orf62Q8N4C0 152 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 LFNGQ8NES3 379 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 CACNG5Q9UF02 275 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 PTPRDP23468 1912 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 YIF1AO95070 293 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 HAND1O96004 215 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 PPYP01298 95 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 MDH2P40926 338 aaKnown RBP10.7□□□□□ -0.7
TCOF1-205ENST00000439160 RIPPLY2Q5TAB7 128 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 ADAM5Q6NVV9 412 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 RPUSD3Q6P087 351 aaKnown RBP10.7□□□□□ -0.7
TCOF1-205ENST00000439160 C16orf97H3BN30 126 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 CTSDP07339 412 aaPredicted RBP10.7□□□□□ -0.7
TCOF1-205ENST00000439160 CPN1P15169 458 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 ACKR3P25106 362 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 HOXA6P31267 233 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 GNB2P62879 340 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 S100A12P80511 92 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 LINC00114Q6XXX2 140 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 IL34Q6ZMJ4 242 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 PRR7Q8TB68 274 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 POC1BQ8TC44 478 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 SCMH1Q96GD3 660 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 LPAR5Q9H1C0 372 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 MYO7BQ6PIF6 2116 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 TRBV5-7A0A0A0MS05 114 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 TRDCB7Z8K6 153 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 PPIHO43447 177 aaKnown RBP10.7□□□□□ -0.7
TCOF1-205ENST00000439160 ISG15P05161 165 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 CD3EP07766 207 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 MPPED2Q15777 294 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 ADAD2Q8NCV1 583 aaKnown RBP10.7□□□□□ -0.7
TCOF1-205ENST00000439160 G6PC2Q9NQR9 355 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 DOCK9Q9BZ29 2069 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 DOCK7Q96N67 2140 aa10.7□□□□□ -0.7
TCOF1-205ENST00000439160 FAM24AA6NFZ4 105 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 ERVH48-1M5A8F1 160 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 TAGLN2P37802 199 aaKnown RBP10.69□□□□□ -0.7
TCOF1-205ENST00000439160 FAM209AQ5JX71 171 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 UBAC2Q8NBM4 344 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 MYOZ1Q9NP98 299 aaPredicted RBP10.69□□□□□ -0.7
TCOF1-205ENST00000439160 CCL28Q9NRJ3 127 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 OPN4Q9UHM6 478 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 ERHP84090 104 aaKnown RBP10.69□□□□□ -0.7
TCOF1-205ENST00000439160 HMGN3Q15651 99 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 MPV17LQ2QL34 196 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 AVPI1Q5T686 147 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 UNQ9370/PRO34162Q6UXP9 181 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 MOB3BQ86TA1 216 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 GAPTQ8N292 157 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 SLC2A9Q9NRM0 540 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 ELF5Q9UKW6 265 aaPredicted RBP10.69□□□□□ -0.7
TCOF1-205ENST00000439160 MED19A0JLT2 244 aaPredicted RBP10.69□□□□□ -0.7
TCOF1-205ENST00000439160 ZIC3O60481 467 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 KCNJ3P48549 501 aa10.69□□□□□ -0.7
TCOF1-205ENST00000439160 SUCLG1P53597 346 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms