RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 CXorf1O96002 111 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 CST4P01036 141 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 CD8AP01732 235 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 KCNJ3P48549 501 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 TUFMP49411 452 aaKnown RBP1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 XKP51811 444 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 SLC18A1P54219 525 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 STX3Q13277 289 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 ACTBL2Q562R1 376 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 TBPL2Q6SJ96 375 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 SPINT4Q6UDR6 99 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 TRMT10CQ7L0Y3 403 aaKnown RBP1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 COPS6Q7L5N1 327 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 FAM19A1Q7Z5A9 133 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 SYCE1Q8N0S2 351 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 GAPTQ8N292 157 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 ZDHHC22Q8N966 263 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 OR8G5Q8NG78 346 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 OR51Q1Q8NH59 317 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 CCDC124Q96CT7 223 aaKnown RBP1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 ZNF75AQ96N20 296 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 PLEKHA1Q9HB21 404 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 ABCB9Q9NP78 766 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 PARP11Q9NR21 331 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 DNAJC27Q9NZQ0 273 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 POFUT2Q9Y2G5 429 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 KLF13Q9Y2Y9 288 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 SHANK1Q9Y566 2161 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 PRDM15P57071 1507 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 FMN1Q68DA7 1419 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 SZT2Q5T011 3432 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 TET3O43151 1660 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 IQGAP2Q13576 1575 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 UGGT1Q9NYU2 1555 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 COL6A3P12111 3177 aa1.93□□□□□ -2.1
TRAPPC13-204ENST00000438419 SEC16AO15027 2179 aa1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 LOC389332A0A1B0GUA5 103 aa1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 RGS5O15539 181 aa1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 IL12BP29460 328 aa1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 TGM4P49221 684 aa1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 ELOCQ15369 112 aa1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 C16orf47Q6ZP98 133 aaPredicted RBP1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 CYP4Z1Q86W10 505 aa1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 CDRT4Q8N9R6 151 aa1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 DRAXINQ8NBI3 349 aaPredicted RBP1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 OR5H2Q8NGV7 314 aa1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 BLNKQ8WV28 456 aa1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 TMEM239Q8WW34 195 aa1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 TNFRSF14Q92956 283 aa1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 RBPMSQ93062 196 aaKnown RBP1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 SEC22CQ9BRL7 303 aa1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 SRRQ9GZT4 340 aa1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 GOLPH3Q9H4A6 298 aa1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 ASB7Q9H672 318 aa1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 MRM2Q9UI43 246 aaKnown RBP1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 SLC22A7Q9Y694 548 aa1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 EHBP1L1Q8N3D4 1523 aa1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 PRR14LQ5THK1 2151 aa1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 ANKRD11Q6UB99 2663 aaPredicted RBP1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 ARHGEF28Q8N1W1 1705 aaKnown RBP1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 ASXL1Q8IXJ9 1541 aa1.92□□□□□ -2.1
TRAPPC13-204ENST00000438419 IZUMO1RA6ND01 250 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 RBFOX3A6NFN3 312 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 OR2AT4A6NND4 320 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 C9JQL5 133 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 UPK1AO00322 258 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 IGHV1-46P01743 117 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 IGLV7-43P04211 117 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 SNRPAP09012 282 aaKnown RBP1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 HTR2BP41595 481 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 CCL23P55773 120 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 MEF2CQ06413 473 aaPredicted RBP1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 XRCC4Q13426 336 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 USF2Q15853 346 aaPredicted RBP1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 SSX1Q16384 188 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 CEACAM16Q2WEN9 425 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 ATP6AP1LQ52LC2 224 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 UBE2NLQ5JXB2 153 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 ZNF773Q6PK81 442 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 FA2HQ7L5A8 372 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 LINC00596Q86U02 117 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 SLC26A10Q8NG04 563 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 OR1P1Q8NH06 330 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 UBA3Q8TBC4 463 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 ITLN2Q8WWU7 325 aaPredicted RBP1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 FMC1Q96HJ9 113 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 ZBED3Q96IU2 234 aaPredicted RBP1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 ATP6V1G3Q96LB4 118 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 PPP1R36Q96LQ0 422 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 CATSPER2Q96P56 530 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 NXF2Q9GZY0 626 aaKnown RBP1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 IFT46Q9NQC8 304 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 OR2S2Q9NQN1 319 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 TMEM38BQ9NVV0 291 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 HMGXB4Q9UGU5 601 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 ZNF706Q9Y5V0 76 aaPredicted RBP1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 CACNA1DQ01668 2161 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 WRNQ14191 1432 aaPredicted RBP eCLIP1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 MAST4O15021 2626 aa1.91□□□□□ -2.1
TRAPPC13-204ENST00000438419 SAMD9LQ8IVG5 1584 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms