RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 NHLH2Q02577 135 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 EDDM3AQ14507 147 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 CLEC12BQ2HXU8 276 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 NCMAPQ5T1S8 102 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 FAM27BQ5VT28 67 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 FAM58AQ8N1B3 248 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 SLC35G3Q8N808 338 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 POC1AQ8NBT0 407 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 OR13D1Q8NGV5 346 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 HPSE2Q8WWQ2 592 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 ERGIC1Q969X5 290 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 SLC25A28Q96A46 364 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 FAM210BQ96KR6 192 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 CIB3Q96Q77 187 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-205ENST00000438362 FAM234AQ9H0X4 552 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 CACNG5Q9UF02 275 aa5.85□□□□□ -1.47
CSDE1-205ENST00000438362 C1QL1O75973 258 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 METTL15P1P0C7V9 234 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 LIFP15018 202 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 ATP6V0CP27449 155 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 PMP22Q01453 160 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 TRA2AQ13595 282 aaKnown RBP eCLIP5.84□□□□□ -1.47
CSDE1-205ENST00000438362 ACER2Q5QJU3 275 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 PRAMEF5Q5TYX0 476 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 PRAMEF6Q5VXH4 476 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 DHRS7BQ6IAN0 325 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-205ENST00000438362 GAPTQ8N292 157 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 UBALD1Q8TB05 177 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 SLX1AQ9BQ83 275 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 MIOXQ9UGB7 285 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 ABCA7Q8IZY2 2146 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 UBE2L5PA0A1B0GUS4 154 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 CRYM-AS1A6NIL9 109 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 DNPH1O43598 174 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 ACTL6AO96019 429 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 MBPP02686 304 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-205ENST00000438362 OR8U8P0C7N1 319 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 ZNF735P0CB33 412 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 HLA-GP17693 338 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 SNCAP37840 140 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 SLC10A1Q14973 349 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 BATFQ16520 125 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 PLAC9Q5JTB6 97 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 ZNF574Q6ZN55 896 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-205ENST00000438362 MOB1BQ7L9L4 216 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 TMEM178AQ8NBL3 297 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 USB1Q9BQ65 265 aaKnown RBP5.84□□□□□ -1.47
CSDE1-205ENST00000438362 SMDT1Q9H4I9 107 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 SLC7A10Q9NS82 523 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 TMEM38BQ9NVV0 291 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 OCIAD1Q9NX40 245 aa5.84□□□□□ -1.47
CSDE1-205ENST00000438362 CARHSP1Q9Y2V2 147 aaKnown RBP5.84□□□□□ -1.47
CSDE1-205ENST00000438362 A0A0J9YW62 118 aa5.84□□□□□ -1.48
CSDE1-205ENST00000438362 MAP1LC3B2A6NCE7 125 aa5.84□□□□□ -1.48
CSDE1-205ENST00000438362 EPOPA6NHQ4 379 aa5.84□□□□□ -1.48
CSDE1-205ENST00000438362 TRDCB7Z8K6 153 aa5.84□□□□□ -1.48
CSDE1-205ENST00000438362 H3BQ15 152 aa5.84□□□□□ -1.48
CSDE1-205ENST00000438362 PHOX2AO14813 284 aa5.84□□□□□ -1.48
CSDE1-205ENST00000438362 ACTL6BO94805 426 aa5.84□□□□□ -1.48
CSDE1-205ENST00000438362 KRASP01116 189 aa5.84□□□□□ -1.48
CSDE1-205ENST00000438362 MST1P26927 711 aa5.84□□□□□ -1.48
CSDE1-205ENST00000438362 FOXO1Q12778 655 aa5.84□□□□□ -1.48
CSDE1-205ENST00000438362 ACOT6Q3I5F7 207 aaPredicted RBP5.84□□□□□ -1.48
CSDE1-205ENST00000438362 SPATA46Q5T0L3 261 aa5.84□□□□□ -1.48
CSDE1-205ENST00000438362 DHRS11Q6UWP2 260 aa5.84□□□□□ -1.48
CSDE1-205ENST00000438362 OR2Y1Q8NGV0 311 aa5.84□□□□□ -1.48
CSDE1-205ENST00000438362 MSI2Q96DH6 328 aaKnown RBP5.84□□□□□ -1.48
CSDE1-205ENST00000438362 ATP5SQ99766 215 aa5.84□□□□□ -1.48
CSDE1-205ENST00000438362 MAP1LC3BQ9GZQ8 125 aa5.84□□□□□ -1.48
CSDE1-205ENST00000438362 GPR27Q9NS67 375 aa5.84□□□□□ -1.48
CSDE1-205ENST00000438362 P4HTMQ9NXG6 502 aa5.84□□□□□ -1.48
CSDE1-205ENST00000438362 KLF13Q9Y2Y9 288 aaPredicted RBP5.84□□□□□ -1.48
CSDE1-205ENST00000438362 LOXL2Q9Y4K0 774 aa5.84□□□□□ -1.48
CSDE1-205ENST00000438362 IGHV5-10-1A0A0J9YXX1 117 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 DHRS7CA6NNS2 312 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 SEC14L6B5MCN3 397 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 NPIPB7O75200 414 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 CA11O75493 328 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 LINC00271P0C7V0 271 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 CCL2P13500 99 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 FABP4P15090 132 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 SELEP16581 610 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 ZNF708P17019 499 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 EDDM3BP56851 147 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 PNRC1Q12796 327 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-205ENST00000438362 COL19A1Q14993 1142 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 UBE2V2Q15819 145 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 OR10V1Q8NGI7 309 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 OR11L1Q8NGX0 322 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 M1APQ8TC57 530 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 FAM173AQ9BQD7 235 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 REG4Q9BYZ8 158 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 RTN4RQ9BZR6 473 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 OR2H1Q9GZK4 316 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 CCL28Q9NRJ3 127 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 WNT16Q9UBV4 365 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 DUSP13Q9UII6 198 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 RALGAPA1Q6GYQ0 2036 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 PRR19A6NJB7 356 aa5.83□□□□□ -1.48
CSDE1-205ENST00000438362 SLC38A11Q08AI6 406 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms