RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 BSCL2Q96G97 398 aaPredicted RBP8.16□□□□□ -1.1
CUX1-206ENST00000437600 SF3B5Q9BWJ5 86 aaKnown RBP8.16□□□□□ -1.1
CUX1-206ENST00000437600 DNTTIP1Q9H147 329 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 HRH4Q9H3N8 390 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 MYOZ1Q9NP98 299 aaPredicted RBP8.16□□□□□ -1.1
CUX1-206ENST00000437600 NDRG3Q9UGV2 375 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 ZNF107Q9UII5 783 aaPredicted RBP8.16□□□□□ -1.1
CUX1-206ENST00000437600 ANXA10Q9UJ72 324 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 WASF3Q9UPY6 502 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 STARD10Q9Y365 291 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 INTS1Q8N201 2190 aaKnown RBP8.16□□□□□ -1.1
CUX1-206ENST00000437600 A0A1B0GV50 99 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 KLRC4-KLRK1H3BQV0 150 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 K7EM74 188 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 NME2P1O60361 137 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 CYTIPO60759 359 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 OR2F2O95006 317 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 NME2P22392 152 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 CD82P27701 267 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 PDZK1IP1Q13113 114 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 OR2F1Q13607 317 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 SLC10A1Q14973 349 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 TSC22D1Q15714 1073 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 PAN3Q58A45 887 aaKnown RBP8.16□□□□□ -1.1
CUX1-206ENST00000437600 NSUN5P2Q63ZY6 315 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 HAGHLQ6PII5 290 aaPredicted RBP8.16□□□□□ -1.1
CUX1-206ENST00000437600 C17orf78Q8N4C9 275 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 RFNGQ9Y644 331 aa8.16□□□□□ -1.1
CUX1-206ENST00000437600 OR6C6A6NF89 314 aa8.15□□□□□ -1.1
CUX1-206ENST00000437600 GPR31O00270 319 aa8.15□□□□□ -1.1
CUX1-206ENST00000437600 SCGNO76038 276 aa8.15□□□□□ -1.1
CUX1-206ENST00000437600 CST2P09228 141 aa8.15□□□□□ -1.1
CUX1-206ENST00000437600 OR5AC1P0C628 307 aa8.15□□□□□ -1.1
CUX1-206ENST00000437600 ZNF708P17019 499 aa8.15□□□□□ -1.1
CUX1-206ENST00000437600 FPR2P25090 351 aa8.15□□□□□ -1.1
CUX1-206ENST00000437600 SOX8P57073 446 aa8.15□□□□□ -1.1
CUX1-206ENST00000437600 RAB1AP62820 205 aa8.15□□□□□ -1.1
CUX1-206ENST00000437600 PNLIPRP3Q17RR3 467 aa8.15□□□□□ -1.1
CUX1-206ENST00000437600 SWI5Q1ZZU3 235 aa8.15□□□□□ -1.1
CUX1-206ENST00000437600 HFEQ30201 348 aa8.15□□□□□ -1.1
CUX1-206ENST00000437600 RPL7L1Q6DKI1 246 aaKnown RBP8.15□□□□□ -1.1
CUX1-206ENST00000437600 MEX3BQ6ZN04 569 aaKnown RBP8.15□□□□□ -1.1
CUX1-206ENST00000437600 CBLN2Q8IUK8 224 aa8.15□□□□□ -1.1
CUX1-206ENST00000437600 ZFP82Q8N141 532 aa8.15□□□□□ -1.1
CUX1-206ENST00000437600 PIK3IP1Q96FE7 263 aa8.15□□□□□ -1.1
CUX1-206ENST00000437600 BARX1Q9HBU1 254 aaPredicted RBP8.15□□□□□ -1.1
CUX1-206ENST00000437600 BIN3Q9NQY0 253 aa8.15□□□□□ -1.1
CUX1-206ENST00000437600 SPRR3Q9UBC9 169 aa8.15□□□□□ -1.1
CUX1-206ENST00000437600 PRSS50Q9UI38 385 aa8.15□□□□□ -1.1
CUX1-206ENST00000437600 KLF13Q9Y2Y9 288 aaPredicted RBP8.15□□□□□ -1.1
CUX1-206ENST00000437600 FAM96BQ9Y3D0 163 aa8.15□□□□□ -1.1
CUX1-206ENST00000437600 SERPINE3A8MV23 424 aa8.15□□□□□ -1.11
CUX1-206ENST00000437600 HS3ST1O14792 307 aa8.15□□□□□ -1.11
CUX1-206ENST00000437600 UBBP0CG47 229 aa8.15□□□□□ -1.11
CUX1-206ENST00000437600 SLC25A4P12235 298 aa8.15□□□□□ -1.11
CUX1-206ENST00000437600 PVALBP20472 110 aaPredicted RBP8.15□□□□□ -1.11
CUX1-206ENST00000437600 CALCRP30988 508 aa8.15□□□□□ -1.11
CUX1-206ENST00000437600 RBM39Q14498 530 aaKnown RBP8.15□□□□□ -1.11
CUX1-206ENST00000437600 FOXL2NBQ6ZUU3 175 aa8.15□□□□□ -1.11
CUX1-206ENST00000437600 OSR2Q8N2R0 312 aa8.15□□□□□ -1.11
CUX1-206ENST00000437600 EIF4E3Q8N5X7 224 aaKnown RBP8.15□□□□□ -1.11
CUX1-206ENST00000437600 NEK7Q8TDX7 302 aa8.15□□□□□ -1.11
CUX1-206ENST00000437600 TSNAXQ99598 290 aaKnown RBP8.15□□□□□ -1.11
CUX1-206ENST00000437600 FGF23Q9GZV9 251 aaPredicted RBP8.15□□□□□ -1.11
CUX1-206ENST00000437600 C14orf166Q9Y224 244 aaKnown RBP8.15□□□□□ -1.11
CUX1-206ENST00000437600 FARS2O95363 451 aaKnown RBP8.14□□□□□ -1.11
CUX1-206ENST00000437600 SYNGR4O95473 234 aa8.14□□□□□ -1.11
CUX1-206ENST00000437600 FCGR3AP08637 254 aa8.14□□□□□ -1.11
CUX1-206ENST00000437600 MMP7P09237 267 aaPredicted RBP8.14□□□□□ -1.11
CUX1-206ENST00000437600 HLA-GP17693 338 aa8.14□□□□□ -1.11
CUX1-206ENST00000437600 BCL3P20749 454 aa8.14□□□□□ -1.11
CUX1-206ENST00000437600 KCNJ3P48549 501 aa8.14□□□□□ -1.11
CUX1-206ENST00000437600 ZNF133P52736 654 aaPredicted RBP8.14□□□□□ -1.11
CUX1-206ENST00000437600 PLEKHN1Q494U1 663 aaPredicted RBP8.14□□□□□ -1.11
CUX1-206ENST00000437600 AKIRIN2Q53H80 203 aa8.14□□□□□ -1.11
CUX1-206ENST00000437600 PRR18Q8N4B5 295 aa8.14□□□□□ -1.11
CUX1-206ENST00000437600 CYTL1Q9NRR1 136 aa8.14□□□□□ -1.11
CUX1-206ENST00000437600 CFAP46Q8IYW2 2715 aa8.14□□□□□ -1.11
CUX1-206ENST00000437600 hCG_38984A0A1B0GV85 526 aa8.14□□□□□ -1.11
CUX1-206ENST00000437600 TNFSF12O43508 249 aa8.14□□□□□ -1.11
CUX1-206ENST00000437600 SYNGR1O43759 233 aa8.14□□□□□ -1.11
CUX1-206ENST00000437600 ACTL6AO96019 429 aa8.14□□□□□ -1.11
CUX1-206ENST00000437600 IFNA2P01563 188 aa8.14□□□□□ -1.11
CUX1-206ENST00000437600 FABP1P07148 127 aa8.14□□□□□ -1.11
CUX1-206ENST00000437600 TNFSF10P50591 281 aa8.14□□□□□ -1.11
CUX1-206ENST00000437600 TAS2R46P59540 309 aa8.14□□□□□ -1.11
CUX1-206ENST00000437600 DAZAP2Q15038 168 aaPredicted RBP8.14□□□□□ -1.11
CUX1-206ENST00000437600 LPCAT3Q6P1A2 487 aa8.14□□□□□ -1.11
CUX1-206ENST00000437600 PEG10Q86TG7 708 aaKnown RBP8.14□□□□□ -1.11
CUX1-206ENST00000437600 MCEMP1Q8IX19 187 aa8.14□□□□□ -1.11
CUX1-206ENST00000437600 BAP18Q8IXM2 172 aa8.14□□□□□ -1.11
CUX1-206ENST00000437600 RTN4IP1Q8WWV3 396 aaPredicted RBP8.14□□□□□ -1.11
CUX1-206ENST00000437600 TM2D1Q9BX74 207 aa8.14□□□□□ -1.11
CUX1-206ENST00000437600 SLC7A11Q9UPY5 501 aa8.14□□□□□ -1.11
CUX1-206ENST00000437600 RAXQ9Y2V3 346 aa8.14□□□□□ -1.11
CUX1-206ENST00000437600 CACNA1BQ00975 2339 aa8.14□□□□□ -1.11
CUX1-206ENST00000437600 SCTP09683 121 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 TBPP20226 339 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 CHATP28329 748 aa8.13□□□□□ -1.11
CUX1-206ENST00000437600 UBA52P62987 128 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms