RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 ITLN2Q8WWU7 325 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P31-201ENST00000437242 SLC25A46Q96AG3 418 aa1.53□□□□□ -2.16
HMGB1P31-201ENST00000437242 RPEQ96AT9 228 aa1.53□□□□□ -2.16
HMGB1P31-201ENST00000437242 OTUB2Q96DC9 234 aa1.53□□□□□ -2.16
HMGB1P31-201ENST00000437242 ZNF488Q96MN9 340 aa1.53□□□□□ -2.16
HMGB1P31-201ENST00000437242 RNF145Q96MT1 663 aa1.53□□□□□ -2.16
HMGB1P31-201ENST00000437242 TBL1YQ9BQ87 522 aa1.53□□□□□ -2.16
HMGB1P31-201ENST00000437242 MED10Q9BTT4 135 aa1.53□□□□□ -2.16
HMGB1P31-201ENST00000437242 SAMD10Q9BYL1 202 aa1.53□□□□□ -2.16
HMGB1P31-201ENST00000437242 SLC7A5P2Q9GIP4 190 aa1.53□□□□□ -2.16
HMGB1P31-201ENST00000437242 IQCGQ9H095 443 aaKnown RBP1.53□□□□□ -2.16
HMGB1P31-201ENST00000437242 NCOR1P1Q9H4R4 102 aa1.53□□□□□ -2.16
HMGB1P31-201ENST00000437242 TMEM27Q9HBJ8 222 aa1.53□□□□□ -2.16
HMGB1P31-201ENST00000437242 MRM3Q9HC36 420 aaKnown RBP1.53□□□□□ -2.16
HMGB1P31-201ENST00000437242 MYOZ1Q9NP98 299 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P31-201ENST00000437242 EXOSC4Q9NPD3 245 aaKnown RBP1.53□□□□□ -2.16
HMGB1P31-201ENST00000437242 MRPL22Q9NWU5 206 aaKnown RBP1.53□□□□□ -2.16
HMGB1P31-201ENST00000437242 PDP1Q9P0J1 537 aaPredicted RBP1.53□□□□□ -2.16
HMGB1P31-201ENST00000437242 ENOPH1Q9UHY7 261 aa1.53□□□□□ -2.16
HMGB1P31-201ENST00000437242 ZNF835Q9Y2P0 537 aa1.53□□□□□ -2.16
HMGB1P31-201ENST00000437242 RCL1Q9Y2P8 373 aaKnown RBP1.53□□□□□ -2.16
HMGB1P31-201ENST00000437242 MXRA5Q9NR99 2828 aa1.53□□□□□ -2.17
HMGB1P31-201ENST00000437242 PCLOQ9Y6V0 5065 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 SNRNP200O75643 2136 aaKnown RBP1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 CR1P17927 2039 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 KIAA1549Q9HCM3 1950 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 TGP01266 2768 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 COL6A5A8TX70 2615 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 IGHV7-4-1A0A0J9YVY3 117 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 SPTY2D1-AS1A0A0U1RR47 76 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 A0A1B0GUH1 482 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 KRBOX1C9JBD0 128 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 PRAMEF26H0Y7S4 382 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 GOLGA8TH3BQL2 631 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 H7C1H1 209 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 TNFRSF11BO00300 401 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 BCKDKO14874 412 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 YKT6O15498 198 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 ERI3O43414 337 aaKnown RBP1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 XRCC2O43543 280 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 DNAJB6O75190 326 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 IGLV3-27P01718 113 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 IFNW1P05000 195 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 IL4P05112 153 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 TACSTD2P09758 323 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 UBCP0CG48 685 aaKnown RBP1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 PGA5P0DJD9 388 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 THRAP10827 490 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 GFAPP14136 432 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 CD99P14209 185 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 RAB5AP20339 215 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 RPL23P62829 140 aaKnown RBP1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 GTF2BQ00403 316 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 TRMT5Q32P41 509 aaKnown RBP1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 SYPL2Q5VXT5 272 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 SAXO2Q658L1 398 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 ZFP1Q6P2D0 407 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 KATNAL2Q8IYT4 538 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 TMEM86AQ8N2M4 240 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 LRRC52Q8N7C0 313 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 ZNF709Q8N972 641 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 SNX31Q8N9S9 440 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 UBAC2Q8NBM4 344 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 C19orf18Q8NEA5 215 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 WFDC11Q8NEX6 87 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 FDCSPQ8NFU4 85 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 OR10W1Q8NGF6 305 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 OR56A4Q8NGH8 313 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 OR52E5Q8NH55 327 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 GLYATL2Q8WU03 294 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 CT55Q8WUE5 264 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 CCDC127Q96BQ5 260 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 HAUS1Q96CS2 278 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 SMARCD1Q96GM5 515 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 TEAD3Q99594 435 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 FOXC2Q99958 501 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 SULT4A1Q9BR01 284 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 ULBP1Q9BZM6 244 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 PIGUQ9H490 435 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 CLSTN2Q9H4D0 955 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 ASB7Q9H672 318 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 CSNK1G1Q9HCP0 422 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 LYRM4Q9HD34 91 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 ACP6Q9NPH0 428 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 AGPAT4Q9NRZ5 378 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 PTTG3PQ9NZH4 202 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 MYEF2Q9P2K5 600 aaKnown RBP1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 SLC17A7Q9P2U7 560 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 OR51B4Q9Y5P0 310 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 FADS3Q9Y5Q0 445 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 TSSC4Q9Y5U2 329 aaPredicted RBP1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 S4R3C0 116 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 CHD3Q12873 2000 aaKnown RBP1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 STAB1Q9NY15 2570 aa1.52□□□□□ -2.17
HMGB1P31-201ENST00000437242 AKAP6Q13023 2319 aa1.51□□□□□ -2.17
HMGB1P31-201ENST00000437242 CSPG4Q6UVK1 2322 aa1.51□□□□□ -2.17
HMGB1P31-201ENST00000437242 NCKAP5O14513 1909 aa1.51□□□□□ -2.17
HMGB1P31-201ENST00000437242 IGHV3-72A0A0B4J1Y9 119 aa1.51□□□□□ -2.17
HMGB1P31-201ENST00000437242 IGKV1-8A0A0C4DH67 115 aa1.51□□□□□ -2.17
HMGB1P31-201ENST00000437242 A0A0D9SEW6 157 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms