RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 IGLL1P15814 213 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 JUNBP17275 347 aaPredicted RBP6.22□□□□□ -1.41
VPS50-203ENST00000436177 ATF1P18846 271 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 EPHA2P29317 976 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 ERP29P30040 261 aaKnown RBP6.22□□□□□ -1.41
VPS50-203ENST00000436177 OR3A1P47881 315 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 OR3A4PP47883 348 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 PRRX1P54821 245 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 BDH1Q02338 343 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 DCTN2Q13561 401 aaKnown RBP6.22□□□□□ -1.41
VPS50-203ENST00000436177 ABCA11PQ4W5N1 156 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 FOXB2Q5VYV0 432 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 KDM4DQ6B0I6 523 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 HEPN1Q6WQI6 88 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 Q6ZSR3 168 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 UTS2BQ765I0 119 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 TCF23Q7RTU1 214 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 KCTD20Q7Z5Y7 419 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 CHST4Q8NCG5 386 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 OR51D1Q8NGF3 324 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 OR4P4Q8NGL7 312 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 OR13C9Q8NGT0 318 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 BCAS4Q8TDM0 211 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 TOMM40LQ969M1 308 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 RFT1Q96AA3 541 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 RPEQ96AT9 228 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 RCC1LQ96I51 464 aaKnown RBP6.22□□□□□ -1.41
VPS50-203ENST00000436177 SLC25A33Q9BSK2 321 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 GABARAPL1Q9H0R8 117 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 SEBOXQ9HB31 216 aaPredicted RBP6.22□□□□□ -1.41
VPS50-203ENST00000436177 HMG20AQ9NP66 347 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.22□□□□□ -1.41
VPS50-203ENST00000436177 PCDHB16Q9NRJ7 776 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 ING3Q9NXR8 418 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 OR6C3Q9NZP0 311 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 IL36RNQ9UBH0 155 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 HHLA2Q9UM44 414 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 AP4S1Q9Y587 144 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 CMYA5Q8N3K9 4069 aa6.22□□□□□ -1.41
VPS50-203ENST00000436177 ODAMA1E959 279 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 FAM172BPA6NC97 362 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 FAM90A22PA8MWA6 464 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 NUDT19A8MXV4 375 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 OOSP1A8MZH6 123 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 E9PQ18 207 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 PSPNO60542 156 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 OR2F2O95006 317 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 OR2H2O95918 312 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 HCKP08631 526 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 RPSAP08865 295 aaKnown RBP6.21□□□□□ -1.42
VPS50-203ENST00000436177 FAM106CPP0CH98 169 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 TMEM225BP0DP42 221 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 CD24P25063 80 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 NFYBP25208 207 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 GLP1RP43220 463 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 KIR3DL2P43630 455 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 NPBWR2P48146 333 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 CD83Q01151 205 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 PDZK1IP1Q13113 114 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 ZNF146Q15072 292 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 KRBOX4Q5JUW0 171 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 LDLRAD2Q5SZI1 272 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 AMIGO2Q86SJ2 522 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 RDH10Q8IZV5 341 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 PRSS35Q8N3Z0 413 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 OR52N4Q8NGI2 321 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 OR5D18Q8NGL1 313 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 OR2G2Q8NGZ5 317 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 MYDGFQ969H8 173 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 FGGYQ96C11 551 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 ADAT3Q96EY9 351 aaPredicted RBP6.21□□□□□ -1.42
VPS50-203ENST00000436177 ZNF649Q9BS31 505 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 OSBPL10Q9BXB5 764 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 RHOFQ9HBH0 211 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 TAS2R3Q9NYW6 316 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 MOB4Q9Y3A3 225 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 HSPE1-MOB4S4R3N1 261 aa6.21□□□□□ -1.42
VPS50-203ENST00000436177 PSMB11A5LHX3 300 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 SAC3D1A6NKF1 404 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 HSPB6O14558 160 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 DEGS1O15121 323 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 SLC16A6O15403 523 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 MAGEB3O15480 346 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 CSN2P05814 226 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 DBTP11182 482 aaKnown RBP6.2□□□□□ -1.42
VPS50-203ENST00000436177 GLIPR1P48060 266 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 EFNB1P98172 346 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 AESQ08117 197 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 MADCAM1Q13477 382 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 HES1Q14469 280 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 ATXN7L3Q14CW9 347 aaPredicted RBP6.2□□□□□ -1.42
VPS50-203ENST00000436177 HLA-DRB5Q30154 266 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 PAN3Q58A45 887 aaKnown RBP6.2□□□□□ -1.42
VPS50-203ENST00000436177 DEFB121Q5J5C9 76 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 TPTE2P1Q5T6R2 138 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 SAXO1Q8IYX7 474 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 WIPF2Q8TF74 440 aaPredicted RBP6.2□□□□□ -1.42
VPS50-203ENST00000436177 TSEN15Q8WW01 171 aaKnown RBP6.2□□□□□ -1.42
VPS50-203ENST00000436177 EME1Q96AY2 570 aa6.2□□□□□ -1.42
VPS50-203ENST00000436177 SLC7A6OSQ96CW6 309 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms