RNA–Protein interactions for RNA: ENST00000432519.5

RFTN1-203, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-203ENST00000432519 IGHG3P01860 377 aa12.51□□□□□ -0.41
RFTN1-203ENST00000432519 IGKV1-13P0DP09 117 aa12.51□□□□□ -0.41
RFTN1-203ENST00000432519 ABCA11PQ4W5N1 156 aa12.51□□□□□ -0.41
RFTN1-203ENST00000432519 LDLRAD3Q86YD5 345 aa12.51□□□□□ -0.41
RFTN1-203ENST00000432519 C9orf106Q8NAJ2 232 aa12.51□□□□□ -0.41
RFTN1-203ENST00000432519 Q9N2K0 584 aa12.51□□□□□ -0.41
RFTN1-203ENST00000432519 AGFG2O95081 481 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 DIRAS3O95661 229 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 SCGB1D2O95969 90 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 RCC1P18754 421 aaPredicted RBP12.5□□□□□ -0.41
RFTN1-203ENST00000432519 CD82P27701 267 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 GNRHRP30968 328 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 OR1S2Q8NGQ3 325 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 NEK7Q8TDX7 302 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 MSI2Q96DH6 328 aaKnown RBP12.5□□□□□ -0.41
RFTN1-203ENST00000432519 BSCL2Q96G97 398 aaPredicted RBP12.5□□□□□ -0.41
RFTN1-203ENST00000432519 SLC5A7Q9GZV3 580 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 TRAV24A0A0B4J272 114 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 ANKRD30BLA7E2S9 258 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 HKR1P10072 659 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 ZP3P21754 424 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 ECI1P42126 302 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 ARHGDIBP52566 201 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 TCF15Q12870 199 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 ZNF585AQ6P3V2 769 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 MKXQ8IYA7 352 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 SUMF2Q8NBJ7 301 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 GALNT11Q8NCW6 608 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 OR52M1Q8NGK5 317 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 CNTNAP3BQ96NU0 1288 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 AQP10Q96PS8 301 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 HIST1H2AAQ96QV6 131 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 TAAR6Q96RI8 345 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 CNTNAP3Q9BZ76 1288 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 PCDHB16Q9NRJ7 776 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 ZNF175Q9Y473 711 aa12.5□□□□□ -0.41
RFTN1-203ENST00000432519 LSM5Q9Y4Y9 91 aaKnown RBP12.5□□□□□ -0.41
RFTN1-203ENST00000432519 SMPD2O60906 423 aa12.49□□□□□ -0.41
RFTN1-203ENST00000432519 NUP62P37198 522 aaPredicted RBP12.49□□□□□ -0.41
RFTN1-203ENST00000432519 KIR2DL2P43627 348 aaPredicted RBP12.49□□□□□ -0.41
RFTN1-203ENST00000432519 RPL7L1Q6DKI1 246 aaKnown RBP12.49□□□□□ -0.41
RFTN1-203ENST00000432519 IGFL2Q6UWQ7 119 aa12.49□□□□□ -0.41
RFTN1-203ENST00000432519 FAM214BQ7L5A3 538 aa12.49□□□□□ -0.41
RFTN1-203ENST00000432519 BAP18Q8IXM2 172 aa12.49□□□□□ -0.41
RFTN1-203ENST00000432519 SAXO1Q8IYX7 474 aa12.49□□□□□ -0.41
RFTN1-203ENST00000432519 GALNT14Q96FL9 552 aa12.49□□□□□ -0.41
RFTN1-203ENST00000432519 OR51I2Q9H344 312 aa12.49□□□□□ -0.41
RFTN1-203ENST00000432519 ADGRG4Q8IZF6 3080 aa12.49□□□□□ -0.41
RFTN1-203ENST00000432519 H0YL77 283 aa12.49□□□□□ -0.41
RFTN1-203ENST00000432519 TM4SF5O14894 197 aa12.49□□□□□ -0.41
RFTN1-203ENST00000432519 PHF1O43189 567 aaPredicted RBP12.49□□□□□ -0.41
RFTN1-203ENST00000432519 LRP3O75074 770 aa12.49□□□□□ -0.41
RFTN1-203ENST00000432519 AKR1C2P52895 323 aa12.49□□□□□ -0.41
RFTN1-203ENST00000432519 AKR1C1Q04828 323 aa12.49□□□□□ -0.41
RFTN1-203ENST00000432519 STOML3Q8TAV4 291 aa12.49□□□□□ -0.41
RFTN1-203ENST00000432519 SHARPINQ9H0F6 387 aa12.49□□□□□ -0.41
RFTN1-203ENST00000432519 PCDHB10Q9UN67 800 aa12.49□□□□□ -0.41
RFTN1-203ENST00000432519 CACNA1DQ01668 2161 aa12.48□□□□□ -0.41
RFTN1-203ENST00000432519 MBPP02686 304 aaPredicted RBP12.48□□□□□ -0.41
RFTN1-203ENST00000432519 GNG3P63215 75 aa12.48□□□□□ -0.41
RFTN1-203ENST00000432519 GUSBP1Q15486 140 aa12.48□□□□□ -0.41
RFTN1-203ENST00000432519 GABRA6Q16445 453 aa12.48□□□□□ -0.41
RFTN1-203ENST00000432519 MEX3BQ6ZN04 569 aaKnown RBP12.48□□□□□ -0.41
RFTN1-203ENST00000432519 HSD17B13Q7Z5P4 300 aaPredicted RBP12.48□□□□□ -0.41
RFTN1-203ENST00000432519 UBALD1Q8TB05 177 aa12.48□□□□□ -0.41
RFTN1-203ENST00000432519 SUN5Q8TC36 379 aa12.48□□□□□ -0.41
RFTN1-203ENST00000432519 SECTM1Q8WVN6 248 aa12.48□□□□□ -0.41
RFTN1-203ENST00000432519 PHYHIPLQ96FC7 376 aa12.48□□□□□ -0.41
RFTN1-203ENST00000432519 DHRS9Q9BPW9 319 aa12.48□□□□□ -0.41
RFTN1-203ENST00000432519 RSRP1Q9BUV0 290 aa12.48□□□□□ -0.41
RFTN1-203ENST00000432519 TUBD1Q9UJT1 453 aa12.48□□□□□ -0.41
RFTN1-203ENST00000432519 TBC1D28Q2M2D7 210 aa12.48□□□□□ -0.41
RFTN1-203ENST00000432519 ATRAIDQ6UW56 229 aa12.48□□□□□ -0.41
RFTN1-203ENST00000432519 ZNF818PQ6ZRF7 136 aa12.48□□□□□ -0.41
RFTN1-203ENST00000432519 SLC38A6Q8IZM9 456 aa12.48□□□□□ -0.41
RFTN1-203ENST00000432519 SLC25A40Q8TBP6 338 aa12.48□□□□□ -0.41
RFTN1-203ENST00000432519 USB1Q9BQ65 265 aaKnown RBP12.48□□□□□ -0.41
RFTN1-203ENST00000432519 SMIM3Q9BZL3 60 aa12.48□□□□□ -0.41
RFTN1-203ENST00000432519 PLA2G2EQ9NZK7 142 aa12.48□□□□□ -0.41
RFTN1-203ENST00000432519 HEATR1Q9H583 2144 aaKnown RBP12.48□□□□□ -0.41
RFTN1-203ENST00000432519 DEDDO75618 318 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 MPV17P39210 176 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 GLP1RP43220 463 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 KCNJ3P48549 501 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 HERV-K104P61576 105 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 PPP1CBP62140 327 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 PLEKHN1Q494U1 663 aaPredicted RBP12.47□□□□□ -0.41
RFTN1-203ENST00000432519 LIAT1Q6ZQX7 453 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 FAM58AQ8N1B3 248 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 MRPL30Q8TCC3 161 aaKnown RBP12.47□□□□□ -0.41
RFTN1-203ENST00000432519 NANOS1Q8WY41 292 aaKnown RBP12.47□□□□□ -0.41
RFTN1-203ENST00000432519 ERGIC1Q969X5 290 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 C18orf12Q96KH6 178 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 ASF1BQ9NVP2 202 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 TAS2R3Q9NYW6 316 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 ZDHHC8Q9ULC8 765 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 KCNIP3Q9Y2W7 256 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 MPC1Q9Y5U8 109 aa12.47□□□□□ -0.41
RFTN1-203ENST00000432519 DIDO1Q9BTC0 2240 aaKnown RBP12.47□□□□□ -0.41
RFTN1-203ENST00000432519 ICE1Q9Y2F5 2266 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms