RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 TPPP2P59282 170 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 SRSF7Q16629 238 aaKnown RBP eCLIP3.81□□□□□ -1.8
UBE4A-202ENST00000431736 CMTM1Q8IZ96 169 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 GRPEL2Q8TAA5 225 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 RFESDQ8TAC1 157 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 NABP1Q96AH0 204 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 SGK3Q96BR1 496 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 TMEM59Q9BXS4 323 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 KRTAP17-1Q9BYP8 105 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 C20orf27Q9GZN8 174 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 CFAP46Q8IYW2 2715 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 ODAMA1E959 279 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 ZNF320A2RRD8 509 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 DHRS7CA6NNS2 312 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 ANKRD65E5RJM6 399 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 SULT1B1O43704 296 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 YIF1AO95070 293 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 GNB3P16520 340 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 DCTDP32321 178 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 STUMQ69YW2 141 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 TMEM219Q86XT9 240 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 ZBTB8BQ8NAP8 495 aaPredicted RBP3.81□□□□□ -1.8
UBE4A-202ENST00000431736 LRRC20Q8TCA0 184 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 MBOAT4Q96T53 435 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 TEAD3Q99594 435 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 ERVK13-1Q9NX77 482 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 SSR3Q9UNL2 185 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 VSIG4Q9Y279 399 aa3.81□□□□□ -1.8
UBE4A-202ENST00000431736 TMEM129A0AVI4 362 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 CENPXA8MT69 81 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 SLC22A1O15245 554 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 FABP1P07148 127 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 PGA5P0DJD9 388 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 DUSP1P28562 367 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 HTR1FP30939 366 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 FAM3AP98173 230 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 MPPED2Q15777 294 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 MST1LQ2TV78 715 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 MZT2AQ6P582 158 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 ZNRF1Q8ND25 227 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 OR52N1Q8NH53 320 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 MND1Q9BWT6 205 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 IKZF5Q9H5V7 419 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 IL20Q9NYY1 176 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 MMP24Q9Y5R2 645 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 SLC22A5O76082 557 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 MT-ND2P03891 347 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 CTXN2P0C2S0 81 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 PGAM2P15259 253 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 IL13RA2Q14627 380 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 EXOSC6Q5RKV6 272 aaKnown RBP3.8□□□□□ -1.8
UBE4A-202ENST00000431736 WDR82Q6UXN9 313 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 LHFPL3Q86UP9 236 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 TSPYL5Q86VY4 417 aaPredicted RBP3.8□□□□□ -1.8
UBE4A-202ENST00000431736 ANGPTL5Q86XS5 388 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 DMBX1Q8NFW5 382 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 OR56B1Q8NGI3 324 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 VSTM2AQ8TAG5 236 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 FGFBP3Q8TAT2 258 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 C4orf36Q96KX1 117 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 PRSS27Q9BQR3 290 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 RP2O75695 350 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 MOSP00540 346 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 PSG2P11465 335 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 PRKACGP22612 351 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 AADACP22760 399 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 SUB1P53999 127 aaKnown RBP eCLIP3.8□□□□□ -1.81e-6■■■■■ 30.7
UBE4A-202ENST00000431736 VAX1Q5SQQ9 334 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 SLC35E4Q6ICL7 350 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 LYPD2Q6UXB3 125 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 NOXA1Q86UR1 476 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 TCTEX1D1Q8N7M0 179 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 MMP28Q9H239 520 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 ZNF281Q9Y2X9 895 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 CXorf65A6NEN9 183 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 IGKV1D-33P01593 117 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 IGKV1-33P01594 117 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 NHLRC4P0CG21 123 aaPredicted RBP3.8□□□□□ -1.8
UBE4A-202ENST00000431736 INSL3P51460 131 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 GTF2A1P52655 376 aaPredicted RBP3.8□□□□□ -1.8
UBE4A-202ENST00000431736 LCN12Q6JVE5 192 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 ZBTB46Q86UZ6 589 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 OR10V1Q8NGI7 309 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 OR56B4Q8NH76 319 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 OR10J5Q8NHC4 309 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 COMMD5Q9GZQ3 224 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 CALYQ9NYX4 217 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 TCF19Q9Y242 345 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 KLK5Q9Y337 293 aaPredicted RBP3.8□□□□□ -1.8
UBE4A-202ENST00000431736 IGSF10Q6WRI0 2623 aa3.8□□□□□ -1.8
UBE4A-202ENST00000431736 IGLV1-36A0A0B4J1U3 117 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 MEX3AA1L020 520 aaKnown RBP3.79□□□□□ -1.8
UBE4A-202ENST00000431736 OR2F2O95006 317 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 TRGV3P03979 118 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 SNRNP70P08621 437 aaKnown RBP3.79□□□□□ -1.8
UBE4A-202ENST00000431736 SNCAP37840 140 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 RAB40BQ12829 278 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 PDLIM3Q53GG5 364 aaPredicted RBP3.79□□□□□ -1.8
UBE4A-202ENST00000431736 OR4A47Q6IF82 309 aa3.79□□□□□ -1.8
UBE4A-202ENST00000431736 LIN7BQ9HAP6 207 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms