RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 SLC30A8Q8IWU4 369 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 LGI3Q8N145 548 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 ZCCHC24Q8N2G6 241 aaKnown RBP1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 ZNF645Q8N7E2 425 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 SLC35G3Q8N808 338 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 TTLQ8NG68 377 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 ZNF461Q8TAF7 563 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 ZFAND1Q8TCF1 268 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 GHSRQ92847 366 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 SLC25A46Q96AG3 418 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 S100PBPQ96BU1 408 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 LRRC39Q96DD0 335 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 KCNS3Q9BQ31 491 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 C20orf144Q9BQM9 153 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 ZNF649Q9BS31 505 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 RAB1BQ9H0U4 201 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 SYT4Q9H2B2 425 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 CHMP4BQ9H444 224 aaKnown RBP1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 HAUS4Q9H6D7 363 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 FLVCR2Q9UPI3 526 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 S4R3C0 116 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 PLIN4Q96Q06 1357 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 WDFY3Q8IZQ1 3526 aa1.8□□□□□ -2.12
HMGB1P27-201ENST00000431429 CENPVL3A0A0U1RRI6 287 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 COLCA2A8K830 154 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 K7EN84 100 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 M0R1B8 84 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 PSMD11O00231 422 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 UPK1AO00322 258 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 FOXH1O75593 365 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 OR5AL1P0C617 328 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 SLC35G6P0C7Q6 338 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 PAX6P26367 422 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 APLNRP35414 380 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 GPR4P46093 362 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 GALR1P47211 349 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 ELF3P78545 371 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 C2orf54Q08AI8 447 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 NAB1Q13506 487 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 PDGFRLQ15198 375 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 TOMM34Q15785 309 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 TAL2Q16559 108 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 SNRNP35Q16560 246 aaKnown RBP1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 PRSS8Q16651 343 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 NDUFAF6Q330K2 333 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 FBXO48Q5FWF7 155 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 FAM222AQ5U5X8 452 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 KHDRBS2Q5VWX1 349 aaKnown RBP1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 DUPD1Q68J44 220 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 GUSBP11Q6P575 273 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 H1FOOQ8IZA3 346 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 ZNF101Q8IZC7 436 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 ST13P4Q8IZP2 240 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 SLC7A5P1Q8MH63 180 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 OSR2Q8N2R0 312 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 TMEM256Q8N2U0 113 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 LINC00469Q8N7U9 141 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 OR2L8Q8NGY9 312 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 OR8K3Q8NH51 312 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 NDNFQ8TB73 568 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 LGALS14Q8TCE9 139 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 DCAKDQ8WVC6 231 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 ING5Q8WYH8 240 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 RERGQ96A58 199 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 L3HYPDHQ96EM0 354 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 CPB2Q96IY4 423 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 RNF170Q96K19 258 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 BOLA2Q9H3K6 86 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 ZNF302Q9NR11 478 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 RMND1Q9NWS8 449 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 RHBDL2Q9NX52 303 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 RBMX2Q9Y388 322 aaKnown RBP1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 V9GYY9 64 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 ATAD5Q96QE3 1844 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 DLG5Q8TDM6 1919 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 UBR5O95071 2799 aaPredicted RBP1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 TENM4Q6N022 2769 aa1.79□□□□□ -2.12
HMGB1P27-201ENST00000431429 ACACAQ13085 2346 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 FANCMQ8IYD8 2048 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 BAZ2AQ9UIF9 1905 aaKnown RBP1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 TANC1Q9C0D5 1861 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 ERICH2A1L162 156 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 ARL5CA6NH57 179 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 E7EWF7 191 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 J3QT63 122 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 MANBAO00462 879 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 ZNF593O00488 134 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 PLIN3O60664 434 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 EIF1BO60739 113 aaKnown RBP1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 CCDC22O60826 627 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 LDOC1O95751 146 aaPredicted RBP1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 IGKV1D-16P01601 117 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 GOLGA8HP0CJ92 632 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 NELFEP18615 380 aaKnown RBP1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 IL3RAP26951 378 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 EIF1P41567 113 aaKnown RBP1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 KCNJ3P48549 501 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 TUFMP49411 452 aaKnown RBP1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 PRLHRP49683 370 aa1.78□□□□□ -2.12
HMGB1P27-201ENST00000431429 ZNF616Q08AN1 781 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms