RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 IGKV3D-11A0A0A0MRZ8 115 aa11.03□□□□□ -0.64
CPNE4-201ENST00000429747 MASP2O00187 686 aa11.03□□□□□ -0.64
CPNE4-201ENST00000429747 KRASP01116 189 aa11.03□□□□□ -0.64
CPNE4-201ENST00000429747 DTYMKP23919 212 aa11.03□□□□□ -0.64
CPNE4-201ENST00000429747 RAC3P60763 192 aa11.03□□□□□ -0.64
CPNE4-201ENST00000429747 DHRS7BQ6IAN0 325 aaPredicted RBP11.03□□□□□ -0.64
CPNE4-201ENST00000429747 H3BQ15 152 aa11.03□□□□□ -0.64
CPNE4-201ENST00000429747 YIF1AO95070 293 aa11.03□□□□□ -0.64
CPNE4-201ENST00000429747 IGHMP01871 453 aa11.03□□□□□ -0.64
CPNE4-201ENST00000429747 CD63P08962 238 aa11.03□□□□□ -0.64
CPNE4-201ENST00000429747 CD200P41217 278 aa11.03□□□□□ -0.64
CPNE4-201ENST00000429747 RAB31Q13636 194 aa11.03□□□□□ -0.64
CPNE4-201ENST00000429747 UBAC2Q8NBM4 344 aa11.03□□□□□ -0.64
CPNE4-201ENST00000429747 A0A0J9YW62 118 aa11.02□□□□□ -0.64
CPNE4-201ENST00000429747 EIF3GO75821 320 aaKnown RBP eCLIP11.02□□□□□ -0.64
CPNE4-201ENST00000429747 PRF1P14222 555 aa11.02□□□□□ -0.64
CPNE4-201ENST00000429747 PPP1CCP36873 323 aaKnown RBP11.02□□□□□ -0.64
CPNE4-201ENST00000429747 NOVA1P51513 510 aaKnown RBP11.02□□□□□ -0.64
CPNE4-201ENST00000429747 MLF1P58340 268 aa11.02□□□□□ -0.64
CPNE4-201ENST00000429747 ADGRG7Q96K78 797 aa11.02□□□□□ -0.64
CPNE4-201ENST00000429747 FAM210BQ96KR6 192 aa11.02□□□□□ -0.64
CPNE4-201ENST00000429747 SAMD10Q9BYL1 202 aa11.02□□□□□ -0.64
CPNE4-201ENST00000429747 PRO1933Q9H354 126 aa11.02□□□□□ -0.64
CPNE4-201ENST00000429747 AUP1Q9Y679 476 aa11.02□□□□□ -0.64
CPNE4-201ENST00000429747 RALGAPA1Q6GYQ0 2036 aa11.02□□□□□ -0.65
CPNE4-201ENST00000429747 TRAV39A0A0B4J263 110 aa11.02□□□□□ -0.65
CPNE4-201ENST00000429747 G3V3Q6 166 aa11.02□□□□□ -0.65
CPNE4-201ENST00000429747 DLK1P80370 383 aa11.02□□□□□ -0.65
CPNE4-201ENST00000429747 MPV17LQ2QL34 196 aa11.02□□□□□ -0.65
CPNE4-201ENST00000429747 SNAI3Q3KNW1 292 aa11.02□□□□□ -0.65
CPNE4-201ENST00000429747 CLDN23Q96B33 292 aa11.02□□□□□ -0.65
CPNE4-201ENST00000429747 IP6K3Q96PC2 410 aa11.02□□□□□ -0.65
CPNE4-201ENST00000429747 PCED1AQ9H1Q7 454 aa11.02□□□□□ -0.65
CPNE4-201ENST00000429747 SH3BGRL3Q9H299 93 aa11.02□□□□□ -0.65
CPNE4-201ENST00000429747 A0A0U1RQV5 110 aa11.02□□□□□ -0.65
CPNE4-201ENST00000429747 PRR19A6NJB7 356 aa11.02□□□□□ -0.65
CPNE4-201ENST00000429747 CLDN34H7C241 214 aa11.02□□□□□ -0.65
CPNE4-201ENST00000429747 CCL4P13236 92 aa11.02□□□□□ -0.65
CPNE4-201ENST00000429747 VDAC1P21796 283 aa11.02□□□□□ -0.65
CPNE4-201ENST00000429747 H2BFWTQ7Z2G1 175 aa11.02□□□□□ -0.65
CPNE4-201ENST00000429747 APOBEC3DQ96AK3 386 aaPredicted RBP11.02□□□□□ -0.65
CPNE4-201ENST00000429747 SERTAD4Q9NUC0 356 aa11.02□□□□□ -0.65
CPNE4-201ENST00000429747 C17orf112F2Z3M2 114 aa11.02□□□□□ -0.65
CPNE4-201ENST00000429747 NPIPB7O75200 414 aa11.02□□□□□ -0.65
CPNE4-201ENST00000429747 PDGFBP01127 241 aaPredicted RBP11.02□□□□□ -0.65
CPNE4-201ENST00000429747 SELENOVP59797 346 aa11.02□□□□□ -0.65
CPNE4-201ENST00000429747 ZNF816Q0VGE8 651 aaPredicted RBP11.02□□□□□ -0.65
CPNE4-201ENST00000429747 SLC25A45Q8N413 288 aa11.02□□□□□ -0.65
CPNE4-201ENST00000429747 LURAP1Q96LR2 239 aa11.02□□□□□ -0.65
CPNE4-201ENST00000429747 RIMS4Q9H426 269 aaPredicted RBP11.02□□□□□ -0.65
CPNE4-201ENST00000429747 GPR27Q9NS67 375 aa11.02□□□□□ -0.65
CPNE4-201ENST00000429747 ZNF391Q9UJN7 358 aa11.02□□□□□ -0.65
CPNE4-201ENST00000429747 TIMM8BQ9Y5J9 83 aaPredicted RBP11.02□□□□□ -0.65
CPNE4-201ENST00000429747 CYTIPO60759 359 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 EPHA8P29322 1005 aaPredicted RBP11.01□□□□□ -0.65
CPNE4-201ENST00000429747 HLA-DRB3P79483 266 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 H3F3AP84243 136 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 RTN4RL2Q86UN3 420 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 APCDD1LQ8NCL9 501 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 OR10P1Q8NGE3 313 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 OR52M1Q8NGK5 317 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 OR13D1Q8NGV5 346 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 RTBDNQ9BSG5 229 aaPredicted RBP11.01□□□□□ -0.65
CPNE4-201ENST00000429747 RTL8AQ9BWD3 113 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 LIN7CQ9NUP9 197 aaKnown RBP11.01□□□□□ -0.65
CPNE4-201ENST00000429747 LRP5LA4QPB2 252 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 CRYM-AS1A6NIL9 109 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 TIMM8AO60220 97 aaPredicted RBP11.01□□□□□ -0.65
CPNE4-201ENST00000429747 HTD2P86397 168 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 HFEQ30201 348 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 PPP1R35Q8TAP8 253 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 ABHD3Q8WU67 409 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 TMEM37Q8WXS4 190 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 HIST1H2BAQ96A08 127 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 PLPPR2Q96GM1 343 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 DEFB127Q9H1M4 99 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 CARHSP1Q9Y2V2 147 aaKnown RBP11.01□□□□□ -0.65
CPNE4-201ENST00000429747 MDFIC2A0A1B0GVS7 189 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 A0A1W2PR80 420 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 A8MXE2 369 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 CDS2O95674 445 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 LY86O95711 162 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 ACKR3P25106 362 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 ZXDAP98168 799 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.01□□□□□ -0.65
CPNE4-201ENST00000429747 C10orf35Q96D05 121 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 OSGIN2Q9Y236 505 aa11.01□□□□□ -0.65
CPNE4-201ENST00000429747 TIAF1O95411 115 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 HNF1AP20823 631 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 CA6P23280 308 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 OR10AD1Q8NGE0 317 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 TECTBQ96PL2 329 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 TMEM100Q9NV29 134 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 NCOR1O75376 2440 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 SPTA1P02549 2419 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 IGHV5-10-1A0A0J9YXX1 117 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 A0A1W2PNV4 684 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 MAP1LC3B2A6NCE7 125 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 CD46P15529 392 aa11□□□□□ -0.65
CPNE4-201ENST00000429747 KLK2P20151 261 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms