RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 MCTS1Q9ULC4 181 aaKnown RBP7.55□□□□□ -1.2
GABPB1-205ENST00000429662 AMDHD2Q9Y303 409 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 STARD10Q9Y365 291 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 MRPS18CQ9Y3D5 142 aaKnown RBP7.55□□□□□ -1.2
GABPB1-205ENST00000429662 PTRH2Q9Y3E5 179 aaKnown RBP7.55□□□□□ -1.2
GABPB1-205ENST00000429662 TIMM10BQ9Y5J6 103 aa7.55□□□□□ -1.2
GABPB1-205ENST00000429662 DUXBA0A1W2PPF3 345 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 E9PLN8 166 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 LINC01387J3KSC0 135 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 ST8SIA3O43173 380 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 KCNAB3O43448 404 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 XRCC2O43543 280 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 SYNGR3O43761 229 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 CDS2O95674 445 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 NRASP01111 189 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 DANCRP0C864 163 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 NME2P22392 152 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 NPBWR1P48145 328 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 FOXL2P58012 376 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 MLF1P58340 268 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 SRSF3P84103 164 aaKnown RBP7.54□□□□□ -1.2
GABPB1-205ENST00000429662 MALLQ13021 153 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 GNMTQ14749 295 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 PHYHD1Q5SRE7 291 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 PRAMEF20Q5VT98 475 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 SHEQ5VZ18 495 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 TMEM88Q6PEY1 159 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 Q6ZRG5 221 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 RPS19BP1Q86WX3 136 aaKnown RBP7.54□□□□□ -1.2
GABPB1-205ENST00000429662 CBLN2Q8IUK8 224 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 LRRC18Q8N456 261 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 ZIC4Q8N9L1 334 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 OR8G5Q8NG78 346 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 SAP25Q8TEE9 199 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 NPRL2Q8WTW4 380 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 RTN4IP1Q8WWV3 396 aaPredicted RBP7.54□□□□□ -1.2
GABPB1-205ENST00000429662 MOB3AQ96BX8 217 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 ZNF385AQ96PM9 386 aaKnown RBP7.54□□□□□ -1.2
GABPB1-205ENST00000429662 SPIN2AQ99865 258 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 SPIN2BQ9BPZ2 258 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 RSRP1Q9BUV0 290 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 GPR173Q9NS66 373 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 TMEM38BQ9NVV0 291 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 AK3Q9UIJ7 227 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 LSM5Q9Y4Y9 91 aaKnown RBP7.54□□□□□ -1.2
GABPB1-205ENST00000429662 MTORP42345 2549 aa7.54□□□□□ -1.2
GABPB1-205ENST00000429662 LY6G6EA0A0G2JKS1 128 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 BTBD17A6NE02 478 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 ZNF98A6NK75 572 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 C1orf196B1AJZ1 125 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 SIGLEC5O15389 551 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 PDCD6O75340 191 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 FARS2O95363 451 aaKnown RBP7.53□□□□□ -1.2
GABPB1-205ENST00000429662 MBPP02686 304 aaPredicted RBP7.53□□□□□ -1.2
GABPB1-205ENST00000429662 MT-ND4LP03901 98 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 LCATP04180 440 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 SPP1P10451 314 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 COX6A1P12074 109 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 MMP9P14780 707 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 TCN2P20062 427 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 SNCAP37840 140 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 UCNP55089 124 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 CLDN15P56746 228 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 HERV-K104P61576 105 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 RAB1AP62820 205 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 ZNF266Q14584 549 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 SAXO1Q8IYX7 474 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 TMEM156Q8N614 296 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 AGBL5Q8NDL9 886 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 Q8NFD4 153 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 MAFIPQ8WZ33 124 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 MRPL24Q96A35 216 aaKnown RBP7.53□□□□□ -1.2
GABPB1-205ENST00000429662 FBXO17Q96EF6 278 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 FAAP24Q9BTP7 215 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 SLC25A31Q9H0C2 315 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 UNKLQ9H9P5 680 aaKnown RBP7.53□□□□□ -1.2
GABPB1-205ENST00000429662 PRR13Q9NZ81 148 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 CACFD1Q9UGQ2 172 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 U3KQA8 63 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 CACNA1CQ13936 2221 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 MED13Q9UHV7 2174 aa7.53□□□□□ -1.2
GABPB1-205ENST00000429662 IGKV1D-8A0A087WSZ0 117 aa7.52□□□□□ -1.21
GABPB1-205ENST00000429662 NSG1A0A0A6YYJ2 146 aa7.52□□□□□ -1.21
GABPB1-205ENST00000429662 A0A0J9YW62 118 aa7.52□□□□□ -1.21
GABPB1-205ENST00000429662 ZNF816-ZNF321PA0A0X1KG74 233 aa7.52□□□□□ -1.21
GABPB1-205ENST00000429662 FAM230AA0A1W2PPH8 454 aa7.52□□□□□ -1.21
GABPB1-205ENST00000429662 COLCA2A8K830 154 aa7.52□□□□□ -1.21
GABPB1-205ENST00000429662 UMAD1C9J7I0 102 aa7.52□□□□□ -1.21
GABPB1-205ENST00000429662 FAM157AC9JC47 383 aa7.52□□□□□ -1.21
GABPB1-205ENST00000429662 DIRAS3O95661 229 aa7.52□□□□□ -1.21
GABPB1-205ENST00000429662 P04436 131 aa7.52□□□□□ -1.21
GABPB1-205ENST00000429662 S100A8P05109 93 aa7.52□□□□□ -1.21
GABPB1-205ENST00000429662 CRYBA1P05813 215 aa7.52□□□□□ -1.21
GABPB1-205ENST00000429662 CTXN2P0C2S0 81 aa7.52□□□□□ -1.21
GABPB1-205ENST00000429662 OR5AC1P0C628 307 aa7.52□□□□□ -1.21
GABPB1-205ENST00000429662 CCL3P10147 92 aa7.52□□□□□ -1.21
GABPB1-205ENST00000429662 FUT3P21217 361 aa7.52□□□□□ -1.21
GABPB1-205ENST00000429662 PTAFRP25105 342 aa7.52□□□□□ -1.21
GABPB1-205ENST00000429662 CD80P33681 288 aa7.52□□□□□ -1.21
GABPB1-205ENST00000429662 KCNJ3P48549 501 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms