RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 FAM89BQ8N5H3 189 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 LINC00469Q8N7U9 141 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 ZNF611Q8N823 705 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 ZNF383Q8NA42 475 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 RAB39BQ96DA2 213 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 TMPRSS5Q9H3S3 457 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 HSF4Q9ULV5 492 aa10.81□□□□□ -0.68
CDH3-202ENST00000429102 CHST1O43916 411 aa10.8□□□□□ -0.68
CDH3-202ENST00000429102 GPR137BO60478 399 aa10.8□□□□□ -0.68
CDH3-202ENST00000429102 MPZP25189 248 aa10.8□□□□□ -0.68
CDH3-202ENST00000429102 IL15RAQ13261 267 aa10.8□□□□□ -0.68
CDH3-202ENST00000429102 C10orf91Q5T1B1 145 aa10.8□□□□□ -0.68
CDH3-202ENST00000429102 AKR1C8PQ5T2L2 129 aa10.8□□□□□ -0.68
CDH3-202ENST00000429102 SKA3Q8IX90 412 aa10.8□□□□□ -0.68
CDH3-202ENST00000429102 OR1J1Q8NGS3 322 aa10.8□□□□□ -0.68
CDH3-202ENST00000429102 PP6455Q8WZ26 134 aa10.8□□□□□ -0.68
CDH3-202ENST00000429102 CPNE4Q96A23 557 aaPredicted RBP10.8□□□□□ -0.68
CDH3-202ENST00000429102 TOLLIPQ9H0E2 274 aa10.8□□□□□ -0.68
CDH3-202ENST00000429102 UNKLQ9H9P5 680 aaKnown RBP10.8□□□□□ -0.68
CDH3-202ENST00000429102 PLEKHA2Q9HB19 425 aa10.8□□□□□ -0.68
CDH3-202ENST00000429102 KLF2Q9Y5W3 355 aaPredicted RBP10.8□□□□□ -0.68
CDH3-202ENST00000429102 C3orf85A0A1B0GTC6 90 aa10.8□□□□□ -0.68
CDH3-202ENST00000429102 PQLC2LA1A4F0 135 aa10.8□□□□□ -0.68
CDH3-202ENST00000429102 CARD18P57730 90 aa10.8□□□□□ -0.68
CDH3-202ENST00000429102 RND3P61587 244 aa10.8□□□□□ -0.68
CDH3-202ENST00000429102 NKX6-1P78426 367 aaPredicted RBP10.8□□□□□ -0.68
CDH3-202ENST00000429102 FAM189A2Q15884 450 aa10.8□□□□□ -0.68
CDH3-202ENST00000429102 ZNF880Q6PDB4 577 aa10.8□□□□□ -0.68
CDH3-202ENST00000429102 INTS12Q96CB8 462 aaKnown RBP10.8□□□□□ -0.68
CDH3-202ENST00000429102 POM121Q96HA1 1249 aa10.8□□□□□ -0.68
CDH3-202ENST00000429102 RSG1Q9BU20 258 aa10.8□□□□□ -0.68
CDH3-202ENST00000429102 GPR61Q9BZJ8 451 aa10.8□□□□□ -0.68
CDH3-202ENST00000429102 GPR27Q9NS67 375 aa10.8□□□□□ -0.68
CDH3-202ENST00000429102 PPYP01298 95 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 TRGC2P03986 189 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 RFPL3SP0C7P2 107 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 P2RY1P47900 373 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 RPS23P62266 143 aaKnown RBP10.79□□□□□ -0.68
CDH3-202ENST00000429102 DLK1P80370 383 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 RHEBQ15382 184 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 TMEM171Q8WVE6 324 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 SMOC1Q9H4F8 434 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 CALHM2Q9HA72 323 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 A0A1W2PNV4 684 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 RBMXL2O75526 392 aaKnown RBP10.79□□□□□ -0.68
CDH3-202ENST00000429102 TCN2P20062 427 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 EIF2S3P41091 472 aaKnown RBP10.79□□□□□ -0.68
CDH3-202ENST00000429102 CTAG1AP78358 180 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 FAM3AP98173 230 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 TESK1Q15569 626 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 RAB30Q15771 203 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 CMTM1Q8IZ96 169 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 HPSE2Q8WWQ2 592 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 PLPPR2Q96GM1 343 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 CHCHD2Q9Y6H1 151 aaPredicted RBP10.79□□□□□ -0.68
CDH3-202ENST00000429102 IGHV5-10-1A0A0J9YXX1 117 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 RBFOX3A6NFN3 312 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 AP4M1O00189 453 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 PHOX2AO14813 284 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 HSPA12AO43301 675 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 CXCL1P09341 107 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 HOXA4Q00056 320 aaPredicted RBP10.79□□□□□ -0.68
CDH3-202ENST00000429102 PSG4Q00888 419 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 CYB5R2Q6BCY4 276 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 SPNS3Q6ZMD2 512 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 ZNF429Q86V71 674 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 OR1F12Q8NHA8 337 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 EXTL1Q92935 676 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 BCO1Q9HAY6 547 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 AURKAIP1Q9NWT8 199 aaPredicted RBP10.79□□□□□ -0.68
CDH3-202ENST00000429102 CRIM1Q9NZV1 1036 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 KCNS2Q9ULS6 477 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 PPP1R3CQ9UQK1 317 aa10.79□□□□□ -0.68
CDH3-202ENST00000429102 CFAP47Q6ZTR5 3102 aa10.78□□□□□ -0.68
CDH3-202ENST00000429102 IGKV1D-13A0A0B4J2D9 117 aa10.78□□□□□ -0.68
CDH3-202ENST00000429102 NUDT19A8MXV4 375 aa10.78□□□□□ -0.68
CDH3-202ENST00000429102 PATE3B3GLJ2 98 aa10.78□□□□□ -0.68
CDH3-202ENST00000429102 KLK3P07288 261 aaPredicted RBP10.78□□□□□ -0.68
CDH3-202ENST00000429102 IGKV1-13P0DP09 117 aa10.78□□□□□ -0.68
CDH3-202ENST00000429102 FOXG1P55316 489 aaPredicted RBP10.78□□□□□ -0.68
CDH3-202ENST00000429102 HIST2H3PS2Q5TEC6 136 aa10.78□□□□□ -0.68
CDH3-202ENST00000429102 RPS19BP1Q86WX3 136 aaKnown RBP10.78□□□□□ -0.68
CDH3-202ENST00000429102 HDGFL3Q9Y3E1 203 aa10.78□□□□□ -0.68
CDH3-202ENST00000429102 MPPED1O15442 326 aa10.78□□□□□ -0.68
CDH3-202ENST00000429102 S100A8P05109 93 aa10.78□□□□□ -0.68
CDH3-202ENST00000429102 SELEP16581 610 aa10.78□□□□□ -0.68
CDH3-202ENST00000429102 BCL3P20749 454 aa10.78□□□□□ -0.68
CDH3-202ENST00000429102 MSX1P28360 303 aa10.78□□□□□ -0.68
CDH3-202ENST00000429102 ZNF133P52736 654 aaPredicted RBP10.78□□□□□ -0.68
CDH3-202ENST00000429102 COL19A1Q14993 1142 aa10.78□□□□□ -0.68
CDH3-202ENST00000429102 C3AR1Q16581 482 aa10.78□□□□□ -0.68
CDH3-202ENST00000429102 SSX9Q7RTT3 188 aa10.78□□□□□ -0.68
CDH3-202ENST00000429102 OR56B2PQ8NGI1 322 aa10.78□□□□□ -0.68
CDH3-202ENST00000429102 WFIKKN1Q96NZ8 548 aa10.78□□□□□ -0.68
CDH3-202ENST00000429102 A0A0U1RQK1 487 aa10.78□□□□□ -0.68
CDH3-202ENST00000429102 C5orf49A4QMS7 147 aa10.78□□□□□ -0.68
CDH3-202ENST00000429102 METTL15P1P0C7V9 234 aa10.78□□□□□ -0.68
CDH3-202ENST00000429102 SUMO3P55854 103 aaPredicted RBP10.78□□□□□ -0.68
CDH3-202ENST00000429102 ZNF818PQ6ZRF7 136 aa10.78□□□□□ -0.68
CDH3-202ENST00000429102 DMBX1Q8NFW5 382 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms