RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 LINC01551Q86U37 167 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 CCDC71LQ8N9Z2 235 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 OR4B1Q8NGF8 309 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 FLVCR1-AS1Q8TAF5 88 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 CMTM2Q8TAZ6 248 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 OR51E1Q8TCB6 317 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 SLAMF6Q96DU3 332 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 ZNF319Q9P2F9 582 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 SLC45A2Q9UMX9 530 aa13.98□□□□□ -0.17
C9orf3-206ENST00000428313 IGLON5A6NGN9 336 aa13.97□□□□□ -0.17
C9orf3-206ENST00000428313 MSTNO14793 375 aa13.97□□□□□ -0.17
C9orf3-206ENST00000428313 ONECUT2O95948 504 aa13.97□□□□□ -0.17
C9orf3-206ENST00000428313 P2RY2P41231 377 aa13.97□□□□□ -0.17
C9orf3-206ENST00000428313 TM4SF4P48230 202 aa13.97□□□□□ -0.17
C9orf3-206ENST00000428313 PRSS8Q16651 343 aa13.97□□□□□ -0.17
C9orf3-206ENST00000428313 Q6ZWC4 215 aa13.97□□□□□ -0.17
C9orf3-206ENST00000428313 TIPARPQ7Z3E1 657 aaKnown RBP13.97□□□□□ -0.17
C9orf3-206ENST00000428313 NUDT10Q8NFP7 164 aa13.97□□□□□ -0.17
C9orf3-206ENST00000428313 OR5L1Q8NGL2 311 aa13.97□□□□□ -0.17
C9orf3-206ENST00000428313 IL22RA2Q969J5 263 aa13.97□□□□□ -0.17
C9orf3-206ENST00000428313 RERGQ96A58 199 aaPredicted RBP13.97□□□□□ -0.17
C9orf3-206ENST00000428313 HDAC8Q9BY41 377 aa13.97□□□□□ -0.17
C9orf3-206ENST00000428313 PHPT1Q9NRX4 125 aaPredicted RBP13.97□□□□□ -0.17
C9orf3-206ENST00000428313 PTRH2Q9Y3E5 179 aaKnown RBP13.97□□□□□ -0.17
C9orf3-206ENST00000428313 A0A0C4DFX4 3053 aa13.97□□□□□ -0.17
C9orf3-206ENST00000428313 SSSCA1O60232 199 aa13.97□□□□□ -0.17
C9orf3-206ENST00000428313 MMP23AO75900 390 aa13.97□□□□□ -0.17
C9orf3-206ENST00000428313 ESDP10768 282 aa13.97□□□□□ -0.17
C9orf3-206ENST00000428313 FOSL2P15408 326 aa13.97□□□□□ -0.17
C9orf3-206ENST00000428313 ZNF133P52736 654 aaPredicted RBP13.97□□□□□ -0.17
C9orf3-206ENST00000428313 UCP3P55916 312 aa13.97□□□□□ -0.17
C9orf3-206ENST00000428313 KIR2DS3Q14952 304 aa13.97□□□□□ -0.17
C9orf3-206ENST00000428313 TSPO2Q5TGU0 170 aa13.97□□□□□ -0.17
C9orf3-206ENST00000428313 LYG1Q8N1E2 194 aa13.97□□□□□ -0.17
C9orf3-206ENST00000428313 STPG4Q8N801 248 aa13.97□□□□□ -0.17
C9orf3-206ENST00000428313 MAGT1Q9H0U3 335 aa13.97□□□□□ -0.17
C9orf3-206ENST00000428313 LANCL2Q9NS86 450 aa13.97□□□□□ -0.17
C9orf3-206ENST00000428313 LOC105371242A0A075B767 164 aa13.96□□□□□ -0.17
C9orf3-206ENST00000428313 NKX2-6A6NCS4 301 aa13.96□□□□□ -0.17
C9orf3-206ENST00000428313 H0YGG7 62 aa13.96□□□□□ -0.17
C9orf3-206ENST00000428313 TMEM250H0YL14 139 aa13.96□□□□□ -0.17
C9orf3-206ENST00000428313 PHF1O43189 567 aaPredicted RBP13.96□□□□□ -0.17
C9orf3-206ENST00000428313 JMJD7P0C870 316 aa13.96□□□□□ -0.17
C9orf3-206ENST00000428313 ARF3P61204 181 aaPredicted RBP13.96□□□□□ -0.17
C9orf3-206ENST00000428313 PDGFRLQ15198 375 aa13.96□□□□□ -0.17
C9orf3-206ENST00000428313 FIGLAQ6QHK4 219 aa13.96□□□□□ -0.17
C9orf3-206ENST00000428313 CPEB2Q7Z5Q1 589 aaKnown RBP13.96□□□□□ -0.17
C9orf3-206ENST00000428313 OR1L6Q8NGR2 347 aa13.96□□□□□ -0.17
C9orf3-206ENST00000428313 C16orf52Q8NHV5 167 aa13.96□□□□□ -0.17
C9orf3-206ENST00000428313 CORO2AQ92828 525 aa13.96□□□□□ -0.17
C9orf3-206ENST00000428313 SLC46A1Q96NT5 459 aa13.96□□□□□ -0.17
C9orf3-206ENST00000428313 CCDC3Q9BQI4 270 aa13.96□□□□□ -0.17
C9orf3-206ENST00000428313 RPRMQ9NS64 109 aa13.96□□□□□ -0.17
C9orf3-206ENST00000428313 RNF115Q9Y4L5 304 aa13.96□□□□□ -0.17
C9orf3-206ENST00000428313 WIPI2Q9Y4P8 454 aa13.96□□□□□ -0.17
C9orf3-206ENST00000428313 B3GALT1Q9Y5Z6 326 aa13.96□□□□□ -0.17
C9orf3-206ENST00000428313 PXMP4Q9Y6I8 212 aa13.96□□□□□ -0.17
C9orf3-206ENST00000428313 PRRC2BQ5JSZ5 2229 aaKnown RBP13.96□□□□□ -0.18
C9orf3-206ENST00000428313 LRRC3CA6NJW4 275 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 HSBP1L1C9JCN9 74 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 PLPP3O14495 311 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 NUPR1O60356 82 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 CST7O76096 145 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 IFNA5P01569 189 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 TCEA2Q15560 299 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 PHLDA2Q53GA4 152 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 LRP11Q86VZ4 500 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 D2HGDHQ8N465 521 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 ZFYVE21Q9BQ24 234 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 ZNF552Q9H707 407 aaPredicted RBP13.95□□□□□ -0.18
C9orf3-206ENST00000428313 MBNL1Q9NR56 388 aaKnown RBP13.95□□□□□ -0.18
C9orf3-206ENST00000428313 TRAPPC1Q9Y5R8 145 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 LILRB3O75022 631 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 UBE2G2P60604 165 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 MMDQ15546 238 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 MORN2Q502X0 79 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 TMEM41BQ5BJD5 291 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 CST9LP1Q5W188 147 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 CLEC2AQ6UVW9 174 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 OR5D18Q8NGL1 313 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 OR14C36Q8NHC7 312 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 FGF14Q92915 247 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 WDYHV1Q96HA8 205 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 SEPSECSQ9HD40 501 aaKnown RBP13.95□□□□□ -0.18
C9orf3-206ENST00000428313 MANBALQ9NQG1 85 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 NXT1Q9UKK6 140 aaKnown RBP13.95□□□□□ -0.18
C9orf3-206ENST00000428313 TMEM131Q92545 1883 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 PCNX3Q9H6A9 2034 aa13.95□□□□□ -0.18
C9orf3-206ENST00000428313 MUC22E2RYF6 1773 aaPredicted RBP13.95□□□□□ -0.18
C9orf3-206ENST00000428313 TET1Q8NFU7 2136 aa13.94□□□□□ -0.18
C9orf3-206ENST00000428313 TMEM238LA0A1B0GVL6 79 aa13.94□□□□□ -0.18
C9orf3-206ENST00000428313 CCL1P22362 96 aa13.94□□□□□ -0.18
C9orf3-206ENST00000428313 DTYMKP23919 212 aa13.94□□□□□ -0.18
C9orf3-206ENST00000428313 ZNF77Q15935 545 aa13.94□□□□□ -0.18
C9orf3-206ENST00000428313 ZNF726P1Q15940 193 aa13.94□□□□□ -0.18
C9orf3-206ENST00000428313 LCN15Q6UWW0 184 aa13.94□□□□□ -0.18
C9orf3-206ENST00000428313 METTL27Q8N6F8 245 aaPredicted RBP13.94□□□□□ -0.18
C9orf3-206ENST00000428313 PSMG3Q9BT73 122 aaPredicted RBP13.94□□□□□ -0.18
C9orf3-206ENST00000428313 UQCR10Q9UDW1 63 aa13.94□□□□□ -0.18
C9orf3-206ENST00000428313 DUXBA0A1W2PPF3 345 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms