RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 SCAND1P57086 179 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 SLC45A2Q9UMX9 530 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 WASHC3Q9Y3C0 194 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 TRGV10A0A0A0MS01 117 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 CBR3O75828 277 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 CYC1P08574 325 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 GNG3P63215 75 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 GUCA2BQ16661 112 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 BTNL3Q6UXE8 466 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 MOB3BQ86TA1 216 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 GNRHR2Q96P88 292 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 TAAR3PQ9P1P4 343 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 WDR90Q96KV7 1748 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 MKRN2OSH3BPM6 223 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 CT62P0C5K7 136 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 SUMO3P55854 103 aaPredicted RBP12.82□□□□□ -0.36
PTPRU-204ENST00000428026 PNRC1Q12796 327 aaPredicted RBP12.82□□□□□ -0.36
PTPRU-204ENST00000428026 HIST3H3Q16695 136 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 HLA-DRB5Q30154 266 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 JMJD6Q6NYC1 403 aaPredicted RBP12.82□□□□□ -0.36
PTPRU-204ENST00000428026 TBC1D26Q86UD7 250 aa12.82□□□□□ -0.36
PTPRU-204ENST00000428026 ELF5Q9UKW6 265 aaPredicted RBP12.82□□□□□ -0.36
PTPRU-204ENST00000428026 CHST1O43916 411 aa12.81□□□□□ -0.36
PTPRU-204ENST00000428026 ZNF770Q6IQ21 691 aaPredicted RBP12.81□□□□□ -0.36
PTPRU-204ENST00000428026 LYG1Q8N1E2 194 aa12.81□□□□□ -0.36
PTPRU-204ENST00000428026 OR10C1Q96KK4 312 aa12.81□□□□□ -0.36
PTPRU-204ENST00000428026 IP6K3Q96PC2 410 aa12.81□□□□□ -0.36
PTPRU-204ENST00000428026 KLF13Q9Y2Y9 288 aaPredicted RBP12.81□□□□□ -0.36
PTPRU-204ENST00000428026 PRRG2O14669 202 aa12.81□□□□□ -0.36
PTPRU-204ENST00000428026 PDCD6O75340 191 aa12.81□□□□□ -0.36
PTPRU-204ENST00000428026 FAM87AP0C7U9 286 aa12.81□□□□□ -0.36
PTPRU-204ENST00000428026 G6PCP35575 357 aa12.81□□□□□ -0.36
PTPRU-204ENST00000428026 PKIAP61925 76 aa12.81□□□□□ -0.36
PTPRU-204ENST00000428026 TTC9Q92623 222 aa12.81□□□□□ -0.36
PTPRU-204ENST00000428026 CACFD1Q9UGQ2 172 aa12.81□□□□□ -0.36
PTPRU-204ENST00000428026 IGLV3-16A0A075B6K0 115 aa12.81□□□□□ -0.36
PTPRU-204ENST00000428026 LRRC3CA6NJW4 275 aa12.81□□□□□ -0.36
PTPRU-204ENST00000428026 SLC22A20A6NK97 555 aa12.81□□□□□ -0.36
PTPRU-204ENST00000428026 C11orf94C9JXX5 98 aa12.81□□□□□ -0.36
PTPRU-204ENST00000428026 OGG1O15527 345 aa12.81□□□□□ -0.36
PTPRU-204ENST00000428026 ZNF32P17041 273 aa12.81□□□□□ -0.36
PTPRU-204ENST00000428026 RCC1P18754 421 aaPredicted RBP12.81□□□□□ -0.36
PTPRU-204ENST00000428026 ELOBQ15370 118 aa12.81□□□□□ -0.36
PTPRU-204ENST00000428026 FAM209BQ5JX69 171 aa12.81□□□□□ -0.36
PTPRU-204ENST00000428026 MRPL54Q6P161 138 aaKnown RBP12.81□□□□□ -0.36
PTPRU-204ENST00000428026 TRAT1Q6PIZ9 186 aa12.81□□□□□ -0.36
PTPRU-204ENST00000428026 VN1R17PQ8TDU5 208 aa12.81□□□□□ -0.36
PTPRU-204ENST00000428026 TBX19O60806 448 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 RHOBP62745 196 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 IL24Q13007 206 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 FNDC7Q5VTL7 733 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 C8orf82Q6P1X6 216 aaPredicted RBP12.8□□□□□ -0.36
PTPRU-204ENST00000428026 TMEM91Q6ZNR0 172 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 OR2Z1Q8NG97 314 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 OR1L6Q8NGR2 347 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 ZPBPQ9BS86 351 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 ABHD14AQ9BUJ0 271 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 AAMDCQ9H7C9 122 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 ERVH48-1M5A8F1 160 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 CTSDP07339 412 aaPredicted RBP12.8□□□□□ -0.36
PTPRU-204ENST00000428026 CXCL2P19875 107 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 P2RY1P47900 373 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 DSCR4P56555 118 aaPredicted RBP12.8□□□□□ -0.36
PTPRU-204ENST00000428026 OR10G8Q8NGN5 311 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 STARD4Q96DR4 205 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 TRAV8-7A0A075B6U6 113 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 HLA-GP17693 338 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 WDR73Q6P4I2 378 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 PTP4A1Q93096 173 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 PPIL1Q9Y3C6 166 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 HRASP01112 189 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 IRF3Q14653 427 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 HES3Q5TGS1 186 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 RGS7BPQ6MZT1 257 aaPredicted RBP12.8□□□□□ -0.36
PTPRU-204ENST00000428026 FAHD2BQ6P2I3 314 aaPredicted RBP12.8□□□□□ -0.36
PTPRU-204ENST00000428026 SLC25A42Q86VD7 318 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 OR5AU1Q8NGC0 362 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 FAHD2AQ96GK7 314 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 TMEM147Q9BVK8 224 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 CLEC5AQ9NY25 188 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 IGHV1OR21-1A0A087WYE8 117 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 NAT2P11245 290 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 RNF165Q6ZSG1 346 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 OR8B12Q8NGG6 310 aa12.8□□□□□ -0.36
PTPRU-204ENST00000428026 CD160O95971 181 aa12.79□□□□□ -0.36
PTPRU-204ENST00000428026 ACTL6AO96019 429 aa12.79□□□□□ -0.36
PTPRU-204ENST00000428026 EFNB2P52799 333 aa12.79□□□□□ -0.36
PTPRU-204ENST00000428026 C1QL3Q5VWW1 255 aa12.79□□□□□ -0.36
PTPRU-204ENST00000428026 WNT2BQ93097 391 aa12.79□□□□□ -0.36
PTPRU-204ENST00000428026 NEU3Q9UQ49 428 aa12.79□□□□□ -0.36
PTPRU-204ENST00000428026 MESP2Q0VG99 397 aa12.79□□□□□ -0.36
PTPRU-204ENST00000428026 SARAFQ96BY9 339 aa12.79□□□□□ -0.36
PTPRU-204ENST00000428026 GPR27Q9NS67 375 aa12.79□□□□□ -0.36
PTPRU-204ENST00000428026 OCIAD1Q9NX40 245 aa12.79□□□□□ -0.36
PTPRU-204ENST00000428026 ANXA10Q9UJ72 324 aa12.79□□□□□ -0.36
PTPRU-204ENST00000428026 IGHV5-51A0A0C4DH38 117 aa12.79□□□□□ -0.36
PTPRU-204ENST00000428026 SH2D7A6NKC9 451 aaPredicted RBP12.79□□□□□ -0.36
PTPRU-204ENST00000428026 FAM74A7A6NL05 159 aa12.79□□□□□ -0.36
PTPRU-204ENST00000428026 NCBP2LA6PVI3 153 aaKnown RBP12.79□□□□□ -0.36
PTPRU-204ENST00000428026 MFNGO00587 321 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms