RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 R3HDM4Q96D70 268 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 ARHGAP5-AS1Q96IT6 56 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 FAM103A1Q9BTL3 118 aaKnown RBP8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 SFXN3Q9BWM7 321 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 SIGLEC7Q9Y286 467 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 G3V3Q6 166 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 J3QT63 122 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 FOXH1O75593 365 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 PEX11BO96011 259 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 HIST1H1EP10412 219 aaKnown RBP8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 KIR3DL2P43630 455 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 C21orf58P58505 322 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 SLC25A35Q3KQZ1 300 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 RIMKLAQ8IXN7 391 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 ZNF485Q8NCK3 441 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 FBXL17Q9UF56 701 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 TBX19O60806 448 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 CST7O76096 145 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 PTTG1IPP53801 180 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 C6orf201Q7Z4U5 140 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 CADM3Q8N126 398 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 PLEKHB1Q9UF11 243 aaPredicted RBP8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 ARL2-SNX15V9GYD0 113 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 LALBAP00709 142 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 FGF5P12034 268 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 NUBP1P53384 320 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 FFAR4Q5NUL3 377 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 ARRDC1Q8N5I2 433 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 DDB2Q92466 427 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 CABLES2Q9BTV7 478 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 ZNF385DQ9H6B1 395 aa8.75□□□□□ -1.01
CLTCL1-202ENST00000427926 RGPD3A6NKT7 1758 aaPredicted RBP8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 RGPD4Q7Z3J3 1758 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 PPP1CCP36873 323 aaKnown RBP8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 SLC38A11Q08AI6 406 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 FABP9Q0Z7S8 132 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 ZNF600Q6ZNG1 722 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 TMUB2Q71RG4 321 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 BHLHA9Q7RTU4 235 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 SLC24A4Q8NFF2 622 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 NPAS1Q99742 590 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 OR2J1Q9GZK6 312 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 C20orf141Q9NUB4 165 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 TMEM38BQ9NVV0 291 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 KPTNQ9Y664 436 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 SCN4AP35499 1836 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 SIAH2O43255 324 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 REG1BP48304 166 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 ZNF239Q16600 458 aaKnown RBP8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 FAAP20Q6NZ36 180 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 LYG2Q86SG7 212 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 PDPNQ86YL7 162 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 LINC01560Q8TB33 94 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 RAX2Q96IS3 184 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 A0A1W2PS18 150 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 GAPDHP04406 335 aaKnown RBP8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 OR4E1P0C645 316 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 SMIM6P0DI80 62 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 CTLA4P16410 223 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 CD40P25942 277 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 GALR1P47211 349 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 ZIC1Q15915 447 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 GTF2H5Q6ZYL4 71 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 CCL13Q99616 98 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 MIOXQ9UGB7 285 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 TGOLN2O43493 480 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 HIST1H1DP16402 221 aaKnown RBP8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 CDK5Q00535 292 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 SSBP1Q04837 148 aaKnown RBP8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 HLXQ14774 488 aaPredicted RBP8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 CXorf66Q5JRM2 361 aaPredicted RBP8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 RNF2Q99496 336 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 CACNG5Q9UF02 275 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 CYB5R1Q9UHQ9 305 aa8.74□□□□□ -1.01
CLTCL1-202ENST00000427926 SS18L1O75177 396 aaPredicted RBP8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 NTN1O95631 604 aa8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 BCL3P20749 454 aa8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 PMELP40967 661 aa8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 GPNMBQ14956 572 aa8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 CLRN3Q8NCR9 226 aa8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 STARD4Q96DR4 205 aa8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 WIPI2Q9Y4P8 454 aa8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 MGPP08493 103 aa8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 SP6Q3SY56 376 aa8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 ZNF705AQ6ZN79 300 aaPredicted RBP8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 SLC25A45Q8N413 288 aa8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 SCARB1Q8WTV0 552 aa8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 DERL3Q96Q80 235 aa8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 ZDHHC8Q9ULC8 765 aa8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 ZMIZ1Q9ULJ6 1067 aa8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 KNTC1P50748 2209 aa8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 C3orf85A0A1B0GTC6 90 aa8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 RFPL4AA6NLU0 287 aa8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 RFPL4AL1F8VTS6 287 aa8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 NDUFA2O43678 99 aa8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 MPZL1O95297 269 aa8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 DAOP14920 347 aa8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 ACAA2P42765 397 aaKnown RBP8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 CDC34P49427 236 aaPredicted RBP8.73□□□□□ -1.01
CLTCL1-202ENST00000427926 FAM106AQ4KMX7 169 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms