RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 ZNF20P17024 532 aa8□□□□□ -1.13
GACAT3-201ENST00000426539 IL18R1Q13478 541 aa8□□□□□ -1.13
GACAT3-201ENST00000426539 CDK5R1Q15078 307 aa8□□□□□ -1.13
GACAT3-201ENST00000426539 C17orf58Q2M2W7 97 aa8□□□□□ -1.13
GACAT3-201ENST00000426539 HLA-DRB5Q30154 266 aa8□□□□□ -1.13
GACAT3-201ENST00000426539 ABCA11PQ4W5N1 156 aa8□□□□□ -1.13
GACAT3-201ENST00000426539 SLC25A30Q5SVS4 291 aa8□□□□□ -1.13
GACAT3-201ENST00000426539 TPTE2P1Q5T6R2 138 aa8□□□□□ -1.13
GACAT3-201ENST00000426539 C1orf146Q5VVC0 180 aa8□□□□□ -1.13
GACAT3-201ENST00000426539 CCDC121Q6ZUS5 278 aa8□□□□□ -1.13
GACAT3-201ENST00000426539 C16orf82Q7Z2V1 217 aa8□□□□□ -1.13
GACAT3-201ENST00000426539 OR13C9Q8NGT0 318 aa8□□□□□ -1.13
GACAT3-201ENST00000426539 ZNF596Q8TC21 504 aa8□□□□□ -1.13
GACAT3-201ENST00000426539 RFKQ969G6 155 aa8□□□□□ -1.13
GACAT3-201ENST00000426539 MYDGFQ969H8 173 aa8□□□□□ -1.13
GACAT3-201ENST00000426539 RNFT2Q96EX2 444 aa8□□□□□ -1.13
GACAT3-201ENST00000426539 PELI1Q96FA3 418 aa8□□□□□ -1.13
GACAT3-201ENST00000426539 CENPNQ96H22 339 aaPredicted RBP8□□□□□ -1.13
GACAT3-201ENST00000426539 RBM14Q96PK6 669 aaKnown RBP8□□□□□ -1.13
GACAT3-201ENST00000426539 SLC25A33Q9BSK2 321 aa8□□□□□ -1.13
GACAT3-201ENST00000426539 PPIL3Q9H2H8 161 aaKnown RBP8□□□□□ -1.13
GACAT3-201ENST00000426539 GAL3ST2Q9H3Q3 398 aa8□□□□□ -1.13
GACAT3-201ENST00000426539 AASSQ9UDR5 926 aa8□□□□□ -1.13
GACAT3-201ENST00000426539 GLS2Q9UI32 602 aa8□□□□□ -1.13
GACAT3-201ENST00000426539 TCRBV4S1A1TA0A5B7 111 aa7.99□□□□□ -1.13
GACAT3-201ENST00000426539 DAPL1A0PJW8 107 aa7.99□□□□□ -1.13
GACAT3-201ENST00000426539 ODAMA1E959 279 aa7.99□□□□□ -1.13
GACAT3-201ENST00000426539 LEUTXA8MZ59 168 aa7.99□□□□□ -1.13
GACAT3-201ENST00000426539 BUB1B-PAK6H3BSN5 160 aa7.99□□□□□ -1.13
GACAT3-201ENST00000426539 K7EIL1 84 aa7.99□□□□□ -1.13
GACAT3-201ENST00000426539 OR2F2O95006 317 aa7.99□□□□□ -1.13
GACAT3-201ENST00000426539 CSN2P05814 226 aa7.99□□□□□ -1.13
GACAT3-201ENST00000426539 CGB3P0DN86 165 aa7.99□□□□□ -1.13
GACAT3-201ENST00000426539 CGB7P0DN87 165 aa7.99□□□□□ -1.13
GACAT3-201ENST00000426539 CD33P20138 364 aa7.99□□□□□ -1.13
GACAT3-201ENST00000426539 BRS3P32247 399 aa7.99□□□□□ -1.13
GACAT3-201ENST00000426539 CCR9P51686 369 aa7.99□□□□□ -1.13
GACAT3-201ENST00000426539 ZP1P60852 638 aa7.99□□□□□ -1.13
GACAT3-201ENST00000426539 OR52W1Q6IF63 320 aa7.99□□□□□ -1.13
GACAT3-201ENST00000426539 KCTD20Q7Z5Y7 419 aa7.99□□□□□ -1.13
GACAT3-201ENST00000426539 CENPVQ7Z7K6 275 aaPredicted RBP7.99□□□□□ -1.13
GACAT3-201ENST00000426539 SAXO1Q8IYX7 474 aa7.99□□□□□ -1.13
GACAT3-201ENST00000426539 DNAH3Q8TD57 4116 aa7.99□□□□□ -1.13
GACAT3-201ENST00000426539 TRUB1Q8WWH5 349 aaKnown RBP7.99□□□□□ -1.13
GACAT3-201ENST00000426539 C4orf36Q96KX1 117 aa7.99□□□□□ -1.13
GACAT3-201ENST00000426539 ZNF649Q9BS31 505 aa7.99□□□□□ -1.13
GACAT3-201ENST00000426539 INPP5EQ9NRR6 644 aa7.99□□□□□ -1.13
GACAT3-201ENST00000426539 ING3Q9NXR8 418 aa7.99□□□□□ -1.13
GACAT3-201ENST00000426539 EXOGQ9Y2C4 368 aaKnown RBP7.99□□□□□ -1.13
GACAT3-201ENST00000426539 FAM90A18PA6NE21 464 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 FAM90A16PA6NEW6 464 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 FAM90A20PA6NIJ5 464 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 FAM90A9PA6NNJ1 464 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 FAM90A12PA8MX19 464 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 FAM90A5PA8MXJ8 464 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 E9PI62 339 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 J3QLW9 94 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 MPIG6BO95866 241 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 ALPLP05186 524 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 HTR1AP08908 422 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 FAM90A15PP0C7V4 464 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 FAM90A13PP0C7W8 464 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 FAM90A14PP0C7W9 464 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 FAM90A24PP0C7X0 464 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 PF4V1P10720 104 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 ZNF44P15621 663 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 ZNF19P17023 458 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 GABRB1P18505 474 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 PTGFRP43088 359 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 KRTAP10-11P60412 298 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 SNRPGP62308 76 aaKnown RBP7.98□□□□□ -1.13
GACAT3-201ENST00000426539 SCN1BQ07699 218 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 ALKBH1Q13686 389 aaKnown RBP7.98□□□□□ -1.13
GACAT3-201ENST00000426539 KPNB1Q14974 876 aaKnown RBP7.98□□□□□ -1.13
GACAT3-201ENST00000426539 ATXN7L3Q14CW9 347 aaPredicted RBP7.98□□□□□ -1.13
GACAT3-201ENST00000426539 KRBOX4Q5JUW0 171 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 OR13C3Q8NGS6 347 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 STMN2Q93045 179 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 LGALS12Q96DT0 336 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 KIRREL1Q96J84 757 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 HRASLS5Q96KN8 279 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 ZCCHC4Q9H5U6 513 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 ISG20L2Q9H9L3 353 aaKnown RBP7.98□□□□□ -1.13
GACAT3-201ENST00000426539 MYRFQ9Y2G1 1151 aa7.98□□□□□ -1.13
GACAT3-201ENST00000426539 TSSC4Q9Y5U2 329 aaPredicted RBP7.98□□□□□ -1.13
GACAT3-201ENST00000426539 TRAV24A0A0B4J272 114 aa7.97□□□□□ -1.13
GACAT3-201ENST00000426539 KBTBD11-OT1A0A1B0GTJ5 212 aa7.97□□□□□ -1.13
GACAT3-201ENST00000426539 WI2-2373I1.2A0A1W2PRP0 233 aa7.97□□□□□ -1.13
GACAT3-201ENST00000426539 FUOMA2VDF0 154 aa7.97□□□□□ -1.13
GACAT3-201ENST00000426539 ZNF729A6NN14 1252 aaPredicted RBP7.97□□□□□ -1.13
GACAT3-201ENST00000426539 H3BNX3 289 aa7.97□□□□□ -1.13
GACAT3-201ENST00000426539 TOR1AO14656 332 aa7.97□□□□□ -1.13
GACAT3-201ENST00000426539 EI24O14681 340 aa7.97□□□□□ -1.13
GACAT3-201ENST00000426539 DEGS1O15121 323 aa7.97□□□□□ -1.13
GACAT3-201ENST00000426539 ZFPL1O95159 310 aa7.97□□□□□ -1.13
GACAT3-201ENST00000426539 OR3A4PP47883 348 aa7.97□□□□□ -1.13
GACAT3-201ENST00000426539 DIAPH2-AS1Q14236 149 aa7.97□□□□□ -1.13
GACAT3-201ENST00000426539 KISS1Q15726 138 aa7.97□□□□□ -1.13
GACAT3-201ENST00000426539 ZIK1Q3SY52 487 aaPredicted RBP7.97□□□□□ -1.13
GACAT3-201ENST00000426539 ETV3LQ6ZN32 361 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms