RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 MT-ATP6P00846 226 aa13.98□□□□□ -0.17
PKP4-205ENST00000426248 GZMBP10144 247 aa13.98□□□□□ -0.17
PKP4-205ENST00000426248 DAP3P51398 398 aaKnown RBP13.98□□□□□ -0.17
PKP4-205ENST00000426248 MLF1P58340 268 aa13.98□□□□□ -0.17
PKP4-205ENST00000426248 TLE4Q04727 773 aa13.98□□□□□ -0.17
PKP4-205ENST00000426248 OR1C1Q15619 314 aa13.98□□□□□ -0.17
PKP4-205ENST00000426248 ADIRFQ15847 76 aa13.98□□□□□ -0.17
PKP4-205ENST00000426248 THEM4Q5T1C6 240 aa13.98□□□□□ -0.17
PKP4-205ENST00000426248 ANGPTL5Q86XS5 388 aa13.98□□□□□ -0.17
PKP4-205ENST00000426248 EXD3Q8N9H8 876 aa13.98□□□□□ -0.17
PKP4-205ENST00000426248 MRGPRX4Q96LA9 322 aa13.98□□□□□ -0.17
PKP4-205ENST00000426248 MFRPQ9BY79 579 aa13.98□□□□□ -0.17
PKP4-205ENST00000426248 C20orf202A1L168 122 aa13.98□□□□□ -0.17
PKP4-205ENST00000426248 OR4C45A6NMZ5 311 aa13.98□□□□□ -0.17
PKP4-205ENST00000426248 C21orf140B9A014 251 aa13.98□□□□□ -0.17
PKP4-205ENST00000426248 HKR1P10072 659 aa13.98□□□□□ -0.17
PKP4-205ENST00000426248 HSD11B1P28845 292 aa13.98□□□□□ -0.17
PKP4-205ENST00000426248 C1QL4Q86Z23 238 aa13.98□□□□□ -0.17
PKP4-205ENST00000426248 TMEM217Q8N7C4 229 aa13.98□□□□□ -0.17
PKP4-205ENST00000426248 OR4D6Q8NGJ1 314 aa13.98□□□□□ -0.17
PKP4-205ENST00000426248 FAAP24Q9BTP7 215 aa13.98□□□□□ -0.17
PKP4-205ENST00000426248 SLC26A1Q9H2B4 701 aa13.98□□□□□ -0.17
PKP4-205ENST00000426248 RAB18Q9NP72 206 aa13.98□□□□□ -0.17
PKP4-205ENST00000426248 GNG13Q9P2W3 67 aa13.98□□□□□ -0.17
PKP4-205ENST00000426248 HEATR5AQ86XA9 2040 aa13.98□□□□□ -0.17
PKP4-205ENST00000426248 FAM230AA0A1W2PPH8 454 aa13.97□□□□□ -0.17
PKP4-205ENST00000426248 SFT2D2O95562 160 aa13.97□□□□□ -0.17
PKP4-205ENST00000426248 BANF2Q9H503 90 aa13.97□□□□□ -0.17
PKP4-205ENST00000426248 CDKN2AP42771 156 aaKnown RBP13.97□□□□□ -0.17
PKP4-205ENST00000426248 JOSD1Q15040 202 aaPredicted RBP13.97□□□□□ -0.17
PKP4-205ENST00000426248 WDR25Q64LD2 544 aaPredicted RBP13.97□□□□□ -0.17
PKP4-205ENST00000426248 TOMM20LQ6UXN7 152 aa13.97□□□□□ -0.17
PKP4-205ENST00000426248 PAQR4Q8N4S7 273 aaPredicted RBP13.97□□□□□ -0.17
PKP4-205ENST00000426248 LFNGQ8NES3 379 aa13.97□□□□□ -0.17
PKP4-205ENST00000426248 FAM71F1Q96KD3 344 aaPredicted RBP13.97□□□□□ -0.17
PKP4-205ENST00000426248 RNF24Q9Y225 148 aa13.97□□□□□ -0.17
PKP4-205ENST00000426248 TMED3Q9Y3Q3 217 aa13.97□□□□□ -0.17
PKP4-205ENST00000426248 A0A1W2PPQ1 181 aa13.97□□□□□ -0.17
PKP4-205ENST00000426248 A0A1W2PQD3 144 aa13.97□□□□□ -0.17
PKP4-205ENST00000426248 GJE1A6NN92 205 aa13.97□□□□□ -0.17
PKP4-205ENST00000426248 FTCDNL1E5RQL4 147 aa13.97□□□□□ -0.17
PKP4-205ENST00000426248 CBR3O75828 277 aa13.97□□□□□ -0.17
PKP4-205ENST00000426248 IGHV3-9P01782 118 aa13.97□□□□□ -0.17
PKP4-205ENST00000426248 IFI6P09912 130 aa13.97□□□□□ -0.17
PKP4-205ENST00000426248 OR4A8P0C604 315 aa13.97□□□□□ -0.17
PKP4-205ENST00000426248 CARD18P57730 90 aa13.97□□□□□ -0.17
PKP4-205ENST00000426248 FXYD4P59646 89 aa13.97□□□□□ -0.17
PKP4-205ENST00000426248 ERGIC1Q969X5 290 aa13.97□□□□□ -0.17
PKP4-205ENST00000426248 DNAJC4Q9NNZ3 241 aa13.97□□□□□ -0.17
PKP4-205ENST00000426248 EMC9Q9Y3B6 208 aa13.97□□□□□ -0.17
PKP4-205ENST00000426248 WDFY4Q6ZS81 3184 aa13.97□□□□□ -0.17
PKP4-205ENST00000426248 PPP5D1E7EU14 171 aa13.96□□□□□ -0.17
PKP4-205ENST00000426248 ANKRD55Q3KP44 614 aa13.96□□□□□ -0.17
PKP4-205ENST00000426248 LINC00346Q8IVM7 164 aa13.96□□□□□ -0.17
PKP4-205ENST00000426248 NPEPL1Q8NDH3 523 aa13.96□□□□□ -0.17
PKP4-205ENST00000426248 OR5R1Q8NH85 324 aa13.96□□□□□ -0.17
PKP4-205ENST00000426248 IL22RA2Q969J5 263 aa13.96□□□□□ -0.17
PKP4-205ENST00000426248 TMEM131Q92545 1883 aa13.96□□□□□ -0.17
PKP4-205ENST00000426248 ZNF735P0CB33 412 aa13.96□□□□□ -0.17
PKP4-205ENST00000426248 TMEM11P17152 192 aa13.96□□□□□ -0.17
PKP4-205ENST00000426248 MMP16P51512 607 aa13.96□□□□□ -0.17
PKP4-205ENST00000426248 RPL27P61353 136 aaKnown RBP13.96□□□□□ -0.17
PKP4-205ENST00000426248 ERVS71-1P61550 626 aa13.96□□□□□ -0.17
PKP4-205ENST00000426248 HSF1Q00613 529 aa13.96□□□□□ -0.17
PKP4-205ENST00000426248 GNMTQ14749 295 aa13.96□□□□□ -0.17
PKP4-205ENST00000426248 SP6Q3SY56 376 aa13.96□□□□□ -0.17
PKP4-205ENST00000426248 SAPCD1Q5SSQ6 148 aa13.96□□□□□ -0.17
PKP4-205ENST00000426248 ZNF468Q5VIY5 522 aaPredicted RBP13.96□□□□□ -0.17
PKP4-205ENST00000426248 C22orf15Q8WYQ4 148 aa13.96□□□□□ -0.17
PKP4-205ENST00000426248 WNT5BQ9H1J7 359 aa13.96□□□□□ -0.17
PKP4-205ENST00000426248 CEP295Q9C0D2 2601 aa13.96□□□□□ -0.17
PKP4-205ENST00000426248 CXCL13O43927 109 aa13.96□□□□□ -0.17
PKP4-205ENST00000426248 ZNF16P17020 682 aaPredicted RBP13.96□□□□□ -0.17
PKP4-205ENST00000426248 CHST11Q9NPF2 352 aa13.96□□□□□ -0.17
PKP4-205ENST00000426248 C1orf123Q9NWV4 160 aa13.96□□□□□ -0.17
PKP4-205ENST00000426248 COA3Q9Y2R0 106 aaPredicted RBP13.96□□□□□ -0.17
PKP4-205ENST00000426248 TMEM269A0A1B0GVZ9 245 aa13.96□□□□□ -0.18
PKP4-205ENST00000426248 CLDN34H7C241 214 aa13.96□□□□□ -0.18
PKP4-205ENST00000426248 CLPSP04118 112 aa13.96□□□□□ -0.18
PKP4-205ENST00000426248 H2BFMP0C1H6 154 aa13.96□□□□□ -0.18
PKP4-205ENST00000426248 OR5H8P0DN80 308 aa13.96□□□□□ -0.18
PKP4-205ENST00000426248 ZNF20P17024 532 aa13.96□□□□□ -0.18
PKP4-205ENST00000426248 SULF2Q8IWU5 870 aa13.96□□□□□ -0.18
PKP4-205ENST00000426248 CPEB3Q8NE35 698 aaKnown RBP13.96□□□□□ -0.18
PKP4-205ENST00000426248 PAM16Q9Y3D7 125 aa13.96□□□□□ -0.18
PKP4-205ENST00000426248 TNFSF11O14788 317 aa13.95□□□□□ -0.18
PKP4-205ENST00000426248 GPR137BO60478 399 aa13.95□□□□□ -0.18
PKP4-205ENST00000426248 NXPH3O95157 252 aa13.95□□□□□ -0.18
PKP4-205ENST00000426248 CD82P27701 267 aa13.95□□□□□ -0.18
PKP4-205ENST00000426248 KCTD18Q6PI47 426 aaPredicted RBP13.95□□□□□ -0.18
PKP4-205ENST00000426248 ZNF611Q8N823 705 aa13.95□□□□□ -0.18
PKP4-205ENST00000426248 THRSPQ92748 146 aa13.95□□□□□ -0.18
PKP4-205ENST00000426248 HHLA2Q9UM44 414 aa13.95□□□□□ -0.18
PKP4-205ENST00000426248 FAM221AA4D161 298 aa13.95□□□□□ -0.18
PKP4-205ENST00000426248 KLRC4-KLRK1H3BQV0 150 aa13.95□□□□□ -0.18
PKP4-205ENST00000426248 TAF9Q16594 264 aa13.95□□□□□ -0.18
PKP4-205ENST00000426248 MEX3BQ6ZN04 569 aaKnown RBP13.95□□□□□ -0.18
PKP4-205ENST00000426248 REEP6Q96HR9 211 aa13.95□□□□□ -0.18
PKP4-205ENST00000426248 C4orf45Q96LM5 186 aa13.95□□□□□ -0.18
PKP4-205ENST00000426248 B9D1Q9UPM9 204 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms