RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 CA11O75493 328 aa9.21□□□□□ -0.93
CUX1-205ENST00000425244 MED6O75586 246 aa9.21□□□□□ -0.93
CUX1-205ENST00000425244 F12P00748 615 aaPredicted RBP9.21□□□□□ -0.93
CUX1-205ENST00000425244 ADCYAP1P18509 176 aa9.21□□□□□ -0.93
CUX1-205ENST00000425244 CHATP28329 748 aa9.21□□□□□ -0.93
CUX1-205ENST00000425244 FCGR2CP31995 323 aa9.21□□□□□ -0.93
CUX1-205ENST00000425244 FAM3AP98173 230 aa9.21□□□□□ -0.93
CUX1-205ENST00000425244 C3AR1Q16581 482 aa9.21□□□□□ -0.93
CUX1-205ENST00000425244 TMEM251Q8N6I4 163 aa9.21□□□□□ -0.93
CUX1-205ENST00000425244 OR5L1Q8NGL2 311 aa9.21□□□□□ -0.93
CUX1-205ENST00000425244 NTNG2Q96CW9 530 aa9.21□□□□□ -0.93
CUX1-205ENST00000425244 CNTNAP3BQ96NU0 1288 aa9.21□□□□□ -0.93
CUX1-205ENST00000425244 CNTNAP3Q9BZ76 1288 aa9.21□□□□□ -0.93
CUX1-205ENST00000425244 ZNF442Q9H7R0 627 aa9.21□□□□□ -0.93
CUX1-205ENST00000425244 ZNF703Q9H7S9 590 aaPredicted RBP9.21□□□□□ -0.93
CUX1-205ENST00000425244 TAF9BQ9HBM6 251 aa9.21□□□□□ -0.93
CUX1-205ENST00000425244 LUZP4Q9P127 313 aa9.21□□□□□ -0.93
CUX1-205ENST00000425244 LPAR3Q9UBY5 353 aa9.21□□□□□ -0.93
CUX1-205ENST00000425244 FREM1Q5H8C1 2179 aa9.21□□□□□ -0.93
CUX1-205ENST00000425244 CRYM-AS1A6NIL9 109 aa9.21□□□□□ -0.94
CUX1-205ENST00000425244 ZNF587BE7ETH6 402 aa9.21□□□□□ -0.94
CUX1-205ENST00000425244 RRP8O43159 456 aaKnown RBP9.21□□□□□ -0.94
CUX1-205ENST00000425244 OR7C1O76099 320 aaPredicted RBP9.21□□□□□ -0.94
CUX1-205ENST00000425244 FARS2O95363 451 aaKnown RBP9.21□□□□□ -0.94
CUX1-205ENST00000425244 OR5AC1P0C628 307 aa9.21□□□□□ -0.94
CUX1-205ENST00000425244 FAM157CP0CG43 387 aa9.21□□□□□ -0.94
CUX1-205ENST00000425244 HKR1P10072 659 aa9.21□□□□□ -0.94
CUX1-205ENST00000425244 CD79AP11912 226 aa9.21□□□□□ -0.94
CUX1-205ENST00000425244 LYL1P12980 280 aa9.21□□□□□ -0.94
CUX1-205ENST00000425244 CCL2P13500 99 aa9.21□□□□□ -0.94
CUX1-205ENST00000425244 RPL12P30050 165 aaKnown RBP9.21□□□□□ -0.94
CUX1-205ENST00000425244 PCBD1P61457 104 aa9.21□□□□□ -0.94
CUX1-205ENST00000425244 ABLIM2Q6H8Q1 611 aa9.21□□□□□ -0.94
CUX1-205ENST00000425244 PUSL1Q8N0Z8 303 aaKnown RBP9.21□□□□□ -0.94
CUX1-205ENST00000425244 MDS2Q8NDY4 140 aa9.21□□□□□ -0.94
CUX1-205ENST00000425244 RTN4IP1Q8WWV3 396 aaPredicted RBP9.21□□□□□ -0.94
CUX1-205ENST00000425244 ADGRG7Q96K78 797 aa9.21□□□□□ -0.94
CUX1-205ENST00000425244 TMEM68Q96MH6 324 aa9.21□□□□□ -0.94
CUX1-205ENST00000425244 TMEM100Q9NV29 134 aa9.21□□□□□ -0.94
CUX1-205ENST00000425244 KLF13Q9Y2Y9 288 aaPredicted RBP9.21□□□□□ -0.94
CUX1-205ENST00000425244 hCG_38984A0A1B0GV85 526 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 NME2P1O60361 137 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 DIRAS3O95661 229 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 RNF224P0DH78 156 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 ECI1P42126 302 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 TNFSF10P50591 281 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 PDZK1IP1Q13113 114 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 IL15RAQ13261 267 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 SLC25A26Q70HW3 274 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 OR4A4PQ8NGN8 299 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 PARP12Q9H0J9 701 aaKnown RBP9.2□□□□□ -0.94
CUX1-205ENST00000425244 BCO1Q9HAY6 547 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 DNAJB11Q9UBS4 358 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 ZNF629Q9UEG4 869 aaPredicted RBP9.2□□□□□ -0.94
CUX1-205ENST00000425244 FBXL17Q9UF56 701 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 KCNIP3Q9Y2W7 256 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 KIAA1549Q9HCM3 1950 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 MRPL33O75394 65 aaKnown RBP9.2□□□□□ -0.94
CUX1-205ENST00000425244 EDN3P14138 238 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 MALLQ13021 153 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 RNFT1Q5M7Z0 435 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 CALHM1Q8IU99 346 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 SVBPQ8N300 66 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 CPEB3Q8NE35 698 aaKnown RBP9.2□□□□□ -0.94
CUX1-205ENST00000425244 OR11L1Q8NGX0 322 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 ZNF251Q9BRH9 671 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 PAPOLGQ9BWT3 736 aaKnown RBP9.2□□□□□ -0.94
CUX1-205ENST00000425244 CALHM2Q9HA72 323 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 HSF4Q9ULV5 492 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 DOCK7Q96N67 2140 aa9.2□□□□□ -0.94
CUX1-205ENST00000425244 ZNF816-ZNF321PA0A0X1KG74 233 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 XRCC2O43543 280 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 DTYMKP23919 212 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 LPAR6P43657 344 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 NPBWR2P48146 333 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 FUT6P51993 359 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 CPNE4Q96A23 557 aaPredicted RBP9.19□□□□□ -0.94
CUX1-205ENST00000425244 NAA60Q9H7X0 242 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 MMP26Q9NRE1 261 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 LIPGQ9Y5X9 500 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 TRBV23-1A0A0A0MS06 115 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 HLA-HP01893 362 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 ID4P47928 161 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 SOX8P57073 446 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 TMEM33P57088 247 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 EIF5AP63241 154 aaKnown RBP9.19□□□□□ -0.94
CUX1-205ENST00000425244 ARF1P84077 181 aaKnown RBP9.19□□□□□ -0.94
CUX1-205ENST00000425244 MST1LQ2TV78 715 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 NSUN5P2Q63ZY6 315 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 TMEM42Q69YG0 159 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 MEX3BQ6ZN04 569 aaKnown RBP9.19□□□□□ -0.94
CUX1-205ENST00000425244 LYZL2Q7Z4W2 148 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 CBLN2Q8IUK8 224 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 ZNF611Q8N823 705 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 TMEM178AQ8NBL3 297 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 TLNRD1Q9H1K6 362 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 RGCCQ9H4X1 137 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 ZNF286AQ9HBT8 521 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 SLC2A9Q9NRM0 540 aa9.19□□□□□ -0.94
CUX1-205ENST00000425244 PARPBPQ9NWS1 579 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms