RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 PAGE3Q5JUK9 113 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 ZNF57Q68EA5 555 aaPredicted RBP2.29□□□□□ -2.04
LINC01040-201ENST00000425048 UFSP1Q6NVU6 142 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 FAHD1Q6P587 224 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 HEPN1Q6WQI6 88 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 B3GLCTQ6Y288 498 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 TCF24Q7RTU0 167 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 GRINAQ7Z429 371 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 CMC1Q7Z7K0 106 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 TMEM135Q86UB9 458 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 PARGQ86W56 976 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 CBWD2Q8IUF1 395 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 BPIFB2Q8N4F0 458 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 RNF182Q8N6D2 247 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 ACBD7Q8N6N7 88 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 MDS2Q8NDY4 140 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 FBXL13Q8NEE6 735 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 PROKR2Q8NFJ6 384 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 STXBP6Q8NFX7 210 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 OR4S1Q8NGB4 309 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 OR52M1Q8NGK5 317 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 OR4A15Q8NGL6 344 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 OR8U1Q8NH10 309 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 PIGXQ8TBF5 258 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 M1APQ8TC57 530 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 CD200R1Q8TD46 325 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 ABHD3Q8WU67 409 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 PIH1D2Q8WWB5 315 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 TMEM234Q8WY98 164 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 CDKN2AIPNLQ96HQ2 116 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 TMEM101Q96IK0 257 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 SAMD8Q96LT4 415 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 MRPL45Q9BRJ2 306 aaKnown RBP2.29□□□□□ -2.04
LINC01040-201ENST00000425048 CBWD1Q9BRT8 395 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 UTP23Q9BRU9 249 aaKnown RBP2.29□□□□□ -2.04
LINC01040-201ENST00000425048 TM2D1Q9BX74 207 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 GABARAPL3Q9BY60 117 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 TM6SF2Q9BZW4 377 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 SELENOIQ9C0D9 397 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 COMMD4Q9H0A8 199 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 ARL6Q9H0F7 186 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 SRMSQ9H3Y6 488 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 SRD5A3Q9H8P0 318 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 ACTR8Q9H981 624 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 NMRAL1Q9HBL8 299 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 TMEM138Q9NPI0 162 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 SLC2A9Q9NRM0 540 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 UBQLN4Q9NRR5 601 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 CA10Q9NS85 328 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 SLC35D1Q9NTN3 355 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 CBLN4Q9NTU7 201 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 TMEM100Q9NV29 134 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 UQCC1Q9NVA1 299 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 TXNL4BQ9NX01 149 aaKnown RBP2.29□□□□□ -2.04
LINC01040-201ENST00000425048 NDUFB11Q9NX14 153 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 SOHLH2Q9NX45 425 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 GSKIPQ9P0R6 139 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 COMMD3Q9UBI1 195 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 CACFD1Q9UGQ2 172 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 IL20RAQ9UHF4 553 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 GNG8Q9UK08 70 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 SLC7A11Q9UPY5 501 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 TIMM10BQ9Y5J6 103 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 ORC6Q9Y5N6 252 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 OR51B4Q9Y5P0 310 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 WIF1Q9Y5W5 379 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 SLCO1B1Q9Y6L6 691 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 LCTP09848 1927 aa2.29□□□□□ -2.04
LINC01040-201ENST00000425048 TRAV14DV4A0A0A6YYC5 116 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 LOC285095A0A1B0GVY8 99 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 C7orf77A4D0Y5 90 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 RNF222A6NCQ9 220 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 C5orf51A6NDU8 294 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 GABRR3A8MPY1 467 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 H0YIG0 161 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 UBFD1O14562 309 aaKnown RBP2.28□□□□□ -2.04
LINC01040-201ENST00000425048 CASKO14936 926 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 CYB5BO43169 146 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 TGOLN2O43493 480 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 MED7O43513 233 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 SSNA1O43805 119 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 MFSD11O43934 449 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 GMFGO60234 142 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 CDC40O60508 579 aaKnown RBP eCLIP2.28□□□□□ -2.04
LINC01040-201ENST00000425048 HIST1H2BKO60814 126 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 TBL1XO60907 577 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 APOC2P02655 101 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 RPN2P04844 631 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 ARG1P05089 322 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 IL5P05113 134 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 HIST1H2BJP06899 126 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 PIPP12273 146 aaPredicted RBP2.28□□□□□ -2.04
LINC01040-201ENST00000425048 HLA-DPA1P20036 260 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 SERPINA2P20848 420 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 HIST1H2BOP23527 126 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 HTR2AP28223 471 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 HTR2CP28335 458 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 HIST1H2BBP33778 126 aa2.28□□□□□ -2.04
LINC01040-201ENST00000425048 NAA10P41227 235 aaPredicted RBP2.28□□□□□ -2.04
LINC01040-201ENST00000425048 LGALS7P47929 136 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms