RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 SIGLEC7Q9Y286 467 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 DNAH11Q96DT5 4516 aa4.77□□□□□ -1.65
SDCBP-203ENST00000424270 A0A087WUU8 490 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 IGHV1-3A0A0C4DH29 117 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 C13orf42A0A1B0GVH6 325 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 A0A1W2PPE3 182 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 DHRS12A0PJE2 317 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 J3KTA2 159 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 SIRPB1O00241 398 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 CXCR6O00574 342 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 MAGEB3O15480 346 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 MITFO75030 526 aaPredicted RBP4.76□□□□□ -1.65
SDCBP-203ENST00000424270 TXNDC12O95881 172 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 NRASP01111 189 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 IGLV1-40P01703 118 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 DUSP1P28562 367 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 CD34P28906 385 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 CRYBA2P53672 197 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 APOC4P55056 127 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 RIPPLY1Q0D2K3 151 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 GALEQ14376 348 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 MMDQ15546 238 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 VMACQ2NL98 169 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 CYP4Z1Q86W10 505 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 ANGPTL5Q86XS5 388 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 LAX1Q8IWV1 398 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 OFCC1Q8IZS5 231 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 OR8H1Q8NGG4 311 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 OR52N4Q8NGI2 321 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 OR10A6Q8NH74 314 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 CEP19Q96LK0 163 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 GPX7Q96SL4 187 aaPredicted RBP4.76□□□□□ -1.65
SDCBP-203ENST00000424270 ZCCHC4Q9H5U6 513 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 GPR173Q9NS66 373 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 TAS2R3Q9NYW6 316 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 ZNF319Q9P2F9 582 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 FOXA2Q9Y261 457 aaPredicted RBP4.76□□□□□ -1.65
SDCBP-203ENST00000424270 U3KQV3 271 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 TNCP24821 2201 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 VPS13DQ5THJ4 4388 aa4.76□□□□□ -1.65
SDCBP-203ENST00000424270 HSPG2P98160 4391 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 FAM230AA0A1W2PPH8 454 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 ANGPT2O15123 496 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 BIRC5O15392 142 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 NOS1APO75052 506 aaPredicted RBP4.75□□□□□ -1.65
SDCBP-203ENST00000424270 SCGB1D2O95969 90 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 IL3RAP26951 378 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 PPIFP30405 207 aaKnown RBP4.75□□□□□ -1.65
SDCBP-203ENST00000424270 GLP1RP43220 463 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 GLIPR1P48060 266 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 SCN1BQ07699 218 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 AESQ08117 197 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 AGKQ53H12 422 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 CYBRD1Q53TN4 286 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 LCN1P1Q5VSP4 162 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 UBE2DNLQ8IWF7 75 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 IZUMO1Q8IYV9 350 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 ENTHD1Q8IYW4 607 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 RDH10Q8IZV5 341 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 SYT8Q8NBV8 401 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 OR2K2Q8NGT1 345 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 OR6N2Q8NGY6 317 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 SLAMF9Q96A28 289 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 RCN3Q96D15 328 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 OR52B2Q96RD2 323 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 THAP7Q9BT49 309 aaPredicted RBP4.75□□□□□ -1.65
SDCBP-203ENST00000424270 SLA2Q9H6Q3 261 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 HES4Q9HCC6 221 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 PEMTQ9UBM1 199 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 FBXL7Q9UJT9 491 aa4.75□□□□□ -1.65
SDCBP-203ENST00000424270 IGLV2-18A0A075B6J9 118 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 TRBV5-3A0A0A0MS03 114 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 ODAMA1E959 279 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 ZNF729A6NN14 1252 aaPredicted RBP4.74□□□□□ -1.65
SDCBP-203ENST00000424270 ZNF682O95780 498 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 CYB5AP00167 134 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 TRGV3P03979 118 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 CALCBP10092 127 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 PSKH1P11801 424 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 CTRB1P17538 263 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 ERP29P30040 261 aaKnown RBP4.74□□□□□ -1.65
SDCBP-203ENST00000424270 BLVRBP30043 206 aaPredicted RBP4.74□□□□□ -1.65
SDCBP-203ENST00000424270 F2RL1P55085 397 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 PLGLAQ15195 96 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 MRGPRG-AS1Q2M3A8 158 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 RPEL1Q2QD12 228 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 CD300EQ496F6 205 aaPredicted RBP4.74□□□□□ -1.65
SDCBP-203ENST00000424270 KRBOX4Q5JUW0 171 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 XP32Q5T750 250 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 CTRB2Q6GPI1 263 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 PYHIN1Q6K0P9 492 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 FAHD1Q6P587 224 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 FKBP9P1Q75LS8 142 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 ERI1Q8IV48 349 aaKnown RBP4.74□□□□□ -1.65
SDCBP-203ENST00000424270 STPG3Q8N7X2 389 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 TCEANCQ8N8B7 351 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 YIPF7Q8N8F6 280 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 MNS1Q8NEH6 495 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 OR8B12Q8NGG6 310 aa4.74□□□□□ -1.65
SDCBP-203ENST00000424270 OR52B4Q8NGK2 314 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms