RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 APLNRP35414 380 aa10.22□□□□□ -0.77
PTPRN-204ENST00000423636 FGL1Q08830 312 aa10.22□□□□□ -0.77
PTPRN-204ENST00000423636 MPPED2Q15777 294 aa10.22□□□□□ -0.77
PTPRN-204ENST00000423636 PNLIPRP3Q17RR3 467 aa10.22□□□□□ -0.77
PTPRN-204ENST00000423636 SPSB1Q96BD6 273 aa10.22□□□□□ -0.77
PTPRN-204ENST00000423636 GPR87Q9BY21 358 aa10.22□□□□□ -0.77
PTPRN-204ENST00000423636 TREM1Q9NP99 234 aa10.22□□□□□ -0.77
PTPRN-204ENST00000423636 ABCA1O95477 2261 aa10.21□□□□□ -0.77
PTPRN-204ENST00000423636 FAM74A7A6NL05 159 aa10.21□□□□□ -0.77
PTPRN-204ENST00000423636 B3GALNT1O75752 331 aa10.21□□□□□ -0.77
PTPRN-204ENST00000423636 ACTL6AO96019 429 aa10.21□□□□□ -0.77
PTPRN-204ENST00000423636 AGTR1P30556 359 aa10.21□□□□□ -0.77
PTPRN-204ENST00000423636 CEBPGP53567 150 aa10.21□□□□□ -0.77
PTPRN-204ENST00000423636 HERV-K104P61576 105 aa10.21□□□□□ -0.77
PTPRN-204ENST00000423636 FAM74A3Q4VXF1 159 aa10.21□□□□□ -0.77
PTPRN-204ENST00000423636 TMEM268Q5VZI3 342 aa10.21□□□□□ -0.77
PTPRN-204ENST00000423636 FBXW12Q6X9E4 464 aa10.21□□□□□ -0.77
PTPRN-204ENST00000423636 ETV3LQ6ZN32 361 aa10.21□□□□□ -0.77
PTPRN-204ENST00000423636 PEG10Q86TG7 708 aaKnown RBP10.21□□□□□ -0.77
PTPRN-204ENST00000423636 ZDHHC23Q8IYP9 409 aa10.21□□□□□ -0.77
PTPRN-204ENST00000423636 BVESQ8NE79 360 aa10.21□□□□□ -0.77
PTPRN-204ENST00000423636 WDYHV1Q96HA8 205 aa10.21□□□□□ -0.77
PTPRN-204ENST00000423636 DBX1A6NMT0 343 aa10.21□□□□□ -0.78
PTPRN-204ENST00000423636 TRAPPC2LH3BP13 241 aa10.21□□□□□ -0.78
PTPRN-204ENST00000423636 PDCD6O75340 191 aa10.21□□□□□ -0.78
PTPRN-204ENST00000423636 SMUG1Q53HV7 270 aa10.21□□□□□ -0.78
PTPRN-204ENST00000423636 KIRREL1Q96J84 757 aa10.21□□□□□ -0.78
PTPRN-204ENST00000423636 ZPBPQ9BS86 351 aa10.21□□□□□ -0.78
PTPRN-204ENST00000423636 TM2D1Q9BX74 207 aa10.21□□□□□ -0.78
PTPRN-204ENST00000423636 SH3BGRL3Q9H299 93 aa10.21□□□□□ -0.78
PTPRN-204ENST00000423636 NECAP2Q9NVZ3 263 aa10.21□□□□□ -0.78
PTPRN-204ENST00000423636 OR1A1Q9P1Q5 309 aa10.21□□□□□ -0.78
PTPRN-204ENST00000423636 A0A0D9SG52 128 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 A6NLC8 198 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 ATXN7O15265 892 aaPredicted RBP10.2□□□□□ -0.78
PTPRN-204ENST00000423636 ZNF806P0C7X5 589 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 FUT3P21217 361 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 ZNF133P52736 654 aaPredicted RBP10.2□□□□□ -0.78
PTPRN-204ENST00000423636 GUCA2BQ16661 112 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 GAPTQ8N292 157 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 PIK3IP1Q96FE7 263 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 POM121L2Q96KW2 1035 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 FER1L6-AS2Q96M78 137 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 REPIN1Q9BWE0 567 aaKnown RBP10.2□□□□□ -0.78
PTPRN-204ENST00000423636 C1QTNF5Q9BXJ0 243 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 TERTO14746 1132 aaKnown RBP10.2□□□□□ -0.78
PTPRN-204ENST00000423636 NME2P1O60361 137 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 SCGNO76038 276 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 CST7O76096 145 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 CAV2P51636 162 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 POLR2GP62487 172 aaKnown RBP eCLIP10.2□□□□□ -0.78
PTPRN-204ENST00000423636 HERPUD1Q15011 391 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 SLC35G3Q8N808 338 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 RFESDQ8TAC1 157 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 RASL12Q9NYN1 266 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 PPP1R3CQ9UQK1 317 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 COL27A1Q8IZC6 1860 aaPredicted RBP10.2□□□□□ -0.78
PTPRN-204ENST00000423636 NKX2-6A6NCS4 301 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 C21orf140B9A014 251 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 MBPP02686 304 aaPredicted RBP10.2□□□□□ -0.78
PTPRN-204ENST00000423636 GNRHRP30968 328 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 ZNF818PQ6ZRF7 136 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 GLYATL2Q8WU03 294 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 LRRC46Q96FV0 321 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 OPN3Q9H1Y3 402 aaPredicted RBP10.2□□□□□ -0.78
PTPRN-204ENST00000423636 C12orf4Q9NQ89 552 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 CYTL1Q9NRR1 136 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 PLA2G2EQ9NZK7 142 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 FBLN5Q9UBX5 448 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 FBXL17Q9UF56 701 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 PRELID1Q9Y255 219 aa10.2□□□□□ -0.78
PTPRN-204ENST00000423636 KLF13Q9Y2Y9 288 aaPredicted RBP10.2□□□□□ -0.78
PTPRN-204ENST00000423636 PTPRQQ9UMZ3 2332 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 OR6C65A6NJZ3 312 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 DEFB108AA8MXU0 73 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 OR2F2O95006 317 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 NAT1P18440 290 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 MPV17P39210 176 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 TMEM33P57088 247 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 TAGLNQ01995 201 aaKnown RBP10.19□□□□□ -0.78
PTPRN-204ENST00000423636 OR2F1Q13607 317 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 OR8B8Q15620 311 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 CXorf66Q5JRM2 361 aaPredicted RBP10.19□□□□□ -0.78
PTPRN-204ENST00000423636 PRAMEF6Q5VXH4 476 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 MDS2Q8NDY4 140 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 GTF3AQ92664 365 aaKnown RBP10.19□□□□□ -0.78
PTPRN-204ENST00000423636 NTNG2Q96CW9 530 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 C2orf50Q96LR7 162 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 ZNF286AQ9HBT8 521 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 DUSP13Q9UII6 198 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 UBE2J1Q9Y385 318 aaPredicted RBP10.19□□□□□ -0.78
PTPRN-204ENST00000423636 SESN1Q9Y6P5 492 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 IGHV3-43A0A0B4J1X8 118 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 IGKV1-6A0A0C4DH72 117 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 FAM24AA6NFZ4 105 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 HSPA12AO43301 675 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 MED6O75586 246 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 PPYP01298 95 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 IGHV3-43DP0DP04 118 aa10.19□□□□□ -0.78
PTPRN-204ENST00000423636 IGHV1-2P23083 117 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms