RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 ACBD7Q8N6N7 88 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 YIPF7Q8N8F6 280 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 OR10H4Q8NGA5 316 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 OR8B12Q8NGG6 310 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 OR56B2PQ8NGI1 322 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 OR11L1Q8NGX0 322 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 OR2AE1Q8NHA4 323 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 HAVCR2Q8TDQ0 301 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 ITLN1Q8WWA0 313 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 CCL17Q92583 94 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 REEP6Q96HR9 211 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 BPESC1Q9GZL8 116 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 PBOV1Q9GZY1 135 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 MOB1AQ9H8S9 216 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 RNPEPL1Q9HAU8 725 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 INPP5EQ9NRR6 644 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 TMEM106BQ9NUM4 274 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 FAM206AQ9NX38 181 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 ZNF319Q9P2F9 582 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 NUFIP1Q9UHK0 495 aaKnown RBP2.05□□□□□ -2.08
VPS13A-208ENST00000423463 MRM2Q9UI43 246 aaKnown RBP2.05□□□□□ -2.08
VPS13A-208ENST00000423463 PPP1R3CQ9UQK1 317 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 SNX5Q9Y5X3 404 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 NPTNQ9Y639 398 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 R4GMQ9 66 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 CENPEQ02224 2701 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 CELSR2Q9HCU4 2923 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 ARFGEF3Q5TH69 2177 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 MAST4O15021 2626 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 ANKRD17O75179 2603 aaKnown RBP2.05□□□□□ -2.08
VPS13A-208ENST00000423463 IGHV4-61A0A0C4DH41 118 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 TEX13DA0A0J9YY54 714 aaPredicted RBP2.05□□□□□ -2.08
VPS13A-208ENST00000423463 LRRC30A6NM36 301 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 ANXA2P2A6NMY6 339 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 DHRS7CA6NNS2 312 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 F5H5P2 479 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 H0YHG0 523 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 H0YL77 283 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 J3QRE1 110 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 MLNRO43193 412 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 SRSF10O75494 262 aaKnown RBP2.05□□□□□ -2.08
VPS13A-208ENST00000423463 WBP4O75554 376 aaKnown RBP2.05□□□□□ -2.08
VPS13A-208ENST00000423463 PNPP00491 289 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 IGLV3-1P01715 115 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 TTRP02766 147 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 TFAP2AP05549 437 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 DBTP11182 482 aaKnown RBP2.05□□□□□ -2.08
VPS13A-208ENST00000423463 PCMT1P22061 227 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 CA6P23280 308 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 DCKP27707 260 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 CFHR2P36980 270 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 CAPGP40121 348 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 LMO4P61968 165 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 CSNK2BP67870 215 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 IL5RAQ01344 420 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 ZNF85Q03923 595 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 RIPPLY1Q0D2K3 151 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 MAB21L1Q13394 359 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 ZNF273Q14593 569 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 TMEM155Q4W5P6 130 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 BCL2L15Q5TBC7 163 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 ZNF691Q5VV52 312 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 TMEM244Q5VVB8 128 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 LIPNQ5VXI9 398 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 PRR27Q6MZM9 219 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 FAM220AQ7Z4H9 259 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 LRRC28Q86X40 367 aaPredicted RBP2.05□□□□□ -2.08
VPS13A-208ENST00000423463 CATSPERDQ86XM0 798 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 BHLHE23Q8NDY6 225 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 OR8S1Q8NH09 359 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 CLDND2Q8NHS1 167 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 CYGBQ8WWM9 190 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 RAB39BQ96DA2 213 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 LGALS12Q96DT0 336 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 OR2V2Q96R30 315 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 TBX5Q99593 518 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 MICU1Q9BPX6 476 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 VCX3BQ9H321 246 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 FN3KRPQ9HA64 309 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 FGF20Q9NP95 211 aaPredicted RBP2.05□□□□□ -2.08
VPS13A-208ENST00000423463 YAE1D1Q9NRH1 226 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 PLCXD1Q9NUJ7 323 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 OR52A1Q9UKL2 312 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 SLC22A13Q9Y226 551 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 RHBDD3Q9Y3P4 386 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 WIPI2Q9Y4P8 454 aa2.05□□□□□ -2.08
VPS13A-208ENST00000423463 PPIAL4EA0A075B759 164 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 ZNF816-ZNF321PA0A0X1KG74 233 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 A0A1B0GTI1 187 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 A0A1B0GVI7 797 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 EFCAB10A6NFE3 127 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 TMEM210A6NLX4 147 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 ZNF850A8MQ14 1090 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 B4DSR2 109 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 PPIAL4DF5H284 164 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 MAGEB4O15481 346 aaPredicted RBP2.04□□□□□ -2.08
VPS13A-208ENST00000423463 NDUFA2O43678 99 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 DHRS3O75911 302 aa2.04□□□□□ -2.08
VPS13A-208ENST00000423463 RPP14O95059 124 aaKnown RBP2.04□□□□□ -2.08
VPS13A-208ENST00000423463 TGFAP01135 160 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms