RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 MUC1P15941 1255 aaPredicted RBP11.5□□□□□ -0.57
MCF2L-213ENST00000421756 TBPP20226 339 aa11.5□□□□□ -0.57
MCF2L-213ENST00000421756 CHATP28329 748 aa11.5□□□□□ -0.57
MCF2L-213ENST00000421756 ALKBH6Q3KRA9 238 aa11.5□□□□□ -0.57
MCF2L-213ENST00000421756 POC1AQ8NBT0 407 aa11.5□□□□□ -0.57
MCF2L-213ENST00000421756 ISOC2Q96AB3 205 aa11.5□□□□□ -0.57
MCF2L-213ENST00000421756 PRRX2Q99811 253 aa11.5□□□□□ -0.57
MCF2L-213ENST00000421756 UFSP2Q9NUQ7 469 aa11.5□□□□□ -0.57
MCF2L-213ENST00000421756 RNF150Q9ULK6 438 aa11.5□□□□□ -0.57
MCF2L-213ENST00000421756 TMEM218A2RU14 115 aa11.5□□□□□ -0.57
MCF2L-213ENST00000421756 OR6C6A6NF89 314 aa11.5□□□□□ -0.57
MCF2L-213ENST00000421756 DBX1A6NMT0 343 aa11.5□□□□□ -0.57
MCF2L-213ENST00000421756 SNRNP70P08621 437 aaKnown RBP11.5□□□□□ -0.57
MCF2L-213ENST00000421756 HKR1P10072 659 aa11.5□□□□□ -0.57
MCF2L-213ENST00000421756 CBR1P16152 277 aa11.5□□□□□ -0.57
MCF2L-213ENST00000421756 HES3Q5TGS1 186 aa11.5□□□□□ -0.57
MCF2L-213ENST00000421756 TMEM182Q6ZP80 229 aaPredicted RBP11.5□□□□□ -0.57
MCF2L-213ENST00000421756 Q6ZPA2 131 aa11.5□□□□□ -0.57
MCF2L-213ENST00000421756 SLC35G3Q8N808 338 aa11.5□□□□□ -0.57
MCF2L-213ENST00000421756 CPNE4Q96A23 557 aaPredicted RBP11.5□□□□□ -0.57
MCF2L-213ENST00000421756 NMES1Q9C002 83 aa11.5□□□□□ -0.57
MCF2L-213ENST00000421756 BARX1Q9HBU1 254 aaPredicted RBP11.5□□□□□ -0.57
MCF2L-213ENST00000421756 CCL28Q9NRJ3 127 aa11.5□□□□□ -0.57
MCF2L-213ENST00000421756 AKAP13Q12802 2813 aa11.5□□□□□ -0.57
MCF2L-213ENST00000421756 NKX2-6A6NCS4 301 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 CDRT15L2A8MXV6 281 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 GPR37O15354 613 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 CST2P09228 141 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 OR13C7P0DN81 318 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 CD37P11049 281 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 MEOX1P50221 254 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 PLP2Q04941 152 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 FAM76BQ5HYJ3 339 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 LHFPL1Q86WI0 220 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 CCDC36Q8IYA8 594 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 CNTNAP3Q9BZ76 1288 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 KCNS2Q9ULS6 477 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 hCG_38984A0A1B0GV85 526 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 TRAPPC2LH3BP13 241 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 OTX1P32242 354 aaPredicted RBP11.49□□□□□ -0.57
MCF2L-213ENST00000421756 CXorf66Q5JRM2 361 aaPredicted RBP11.49□□□□□ -0.57
MCF2L-213ENST00000421756 LDLRAD3Q86YD5 345 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 ZNF695Q8IW36 515 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 FAM213BQ8TBF2 198 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 B4GALT7Q9UBV7 327 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 SPTBN1Q01082 2364 aaKnown RBP11.49□□□□□ -0.57
MCF2L-213ENST00000421756 C9JQL5 133 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 AGFG2O95081 481 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 PVALBP20472 110 aaPredicted RBP11.49□□□□□ -0.57
MCF2L-213ENST00000421756 ZNF345Q14585 488 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 GAPTQ8N292 157 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 TPRX1Q8N7U7 411 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 KCNE4Q8WWG9 221 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 SPSB1Q96BD6 273 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 TAAR9Q96RI9 348 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 ABHD14AQ9BUJ0 271 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 PRO3102Q9H379 93 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 PPP1R3CQ9UQK1 317 aa11.49□□□□□ -0.57
MCF2L-213ENST00000421756 PDCD6O75340 191 aa11.48□□□□□ -0.57
MCF2L-213ENST00000421756 FUT3P21217 361 aa11.48□□□□□ -0.57
MCF2L-213ENST00000421756 FKBP2P26885 142 aaKnown RBP11.48□□□□□ -0.57
MCF2L-213ENST00000421756 CAMLGP49069 296 aa11.48□□□□□ -0.57
MCF2L-213ENST00000421756 FUT6P51993 359 aa11.48□□□□□ -0.57
MCF2L-213ENST00000421756 ZNF133P52736 654 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-213ENST00000421756 SLC25A24Q6NUK1 477 aa11.48□□□□□ -0.57
MCF2L-213ENST00000421756 LHFPL2Q6ZUX7 228 aa11.48□□□□□ -0.57
MCF2L-213ENST00000421756 PIGMQ9H3S5 423 aa11.48□□□□□ -0.57
MCF2L-213ENST00000421756 ADAMTS20P59510 1910 aa11.48□□□□□ -0.57
MCF2L-213ENST00000421756 TLN1Q9Y490 2541 aaKnown RBP11.48□□□□□ -0.57
MCF2L-213ENST00000421756 IGKV1D-13A0A0B4J2D9 117 aa11.48□□□□□ -0.57
MCF2L-213ENST00000421756 IGKV1-13P0DP09 117 aa11.48□□□□□ -0.57
MCF2L-213ENST00000421756 PCBD1P61457 104 aa11.48□□□□□ -0.57
MCF2L-213ENST00000421756 TRA2AQ13595 282 aaKnown RBP eCLIP11.48□□□□□ -0.57
MCF2L-213ENST00000421756 FAHD2BQ6P2I3 314 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-213ENST00000421756 ZFP62Q8NB50 900 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-213ENST00000421756 GLYATL2Q8WU03 294 aa11.48□□□□□ -0.57
MCF2L-213ENST00000421756 FAHD2AQ96GK7 314 aa11.48□□□□□ -0.57
MCF2L-213ENST00000421756 MTCH1Q9NZJ7 389 aa11.48□□□□□ -0.57
MCF2L-213ENST00000421756 ZNF107Q9UII5 783 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-213ENST00000421756 DNASE2O00115 360 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-213ENST00000421756 WRBO00258 174 aa11.48□□□□□ -0.57
MCF2L-213ENST00000421756 NKX2-8O15522 239 aa11.48□□□□□ -0.57
MCF2L-213ENST00000421756 TSPAN15O95858 294 aa11.48□□□□□ -0.57
MCF2L-213ENST00000421756 PPYP01298 95 aa11.48□□□□□ -0.57
MCF2L-213ENST00000421756 FAM189A2Q15884 450 aa11.48□□□□□ -0.57
MCF2L-213ENST00000421756 SSC4DQ8WTU2 575 aa11.48□□□□□ -0.57
MCF2L-213ENST00000421756 SUCNR1Q9BXA5 334 aa11.48□□□□□ -0.57
MCF2L-213ENST00000421756 FGF23Q9GZV9 251 aaPredicted RBP11.48□□□□□ -0.57
MCF2L-213ENST00000421756 NAA60Q9H7X0 242 aa11.48□□□□□ -0.57
MCF2L-213ENST00000421756 SH2D2AQ9NP31 389 aa11.48□□□□□ -0.57
MCF2L-213ENST00000421756 A6NLC8 198 aa11.47□□□□□ -0.57
MCF2L-213ENST00000421756 MT-CO3P00414 261 aa11.47□□□□□ -0.57
MCF2L-213ENST00000421756 PET100P0DJ07 73 aa11.47□□□□□ -0.57
MCF2L-213ENST00000421756 RBM11P57052 281 aaKnown RBP11.47□□□□□ -0.57
MCF2L-213ENST00000421756 RUNX1Q01196 453 aa11.47□□□□□ -0.57
MCF2L-213ENST00000421756 MIDNQ504T8 468 aa11.47□□□□□ -0.57
MCF2L-213ENST00000421756 MKXQ8IYA7 352 aa11.47□□□□□ -0.57
MCF2L-213ENST00000421756 SF3B5Q9BWJ5 86 aaKnown RBP11.47□□□□□ -0.57
MCF2L-213ENST00000421756 MYOZ1Q9NP98 299 aaPredicted RBP11.47□□□□□ -0.57
MCF2L-213ENST00000421756 RPS10P5Q9NQ39 176 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms