RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 KRT84Q9NSB2 600 aa13.36□□□□□ -0.27
UPF3AP3-201ENST00000420996 ZFP57Q9NU63 452 aa13.36□□□□□ -0.27
UPF3AP3-201ENST00000420996 FAM90A18PA6NE21 464 aa13.35□□□□□ -0.27
UPF3AP3-201ENST00000420996 FAM90A16PA6NEW6 464 aa13.35□□□□□ -0.27
UPF3AP3-201ENST00000420996 FAM90A20PA6NIJ5 464 aa13.35□□□□□ -0.27
UPF3AP3-201ENST00000420996 FAM90A9PA6NNJ1 464 aa13.35□□□□□ -0.27
UPF3AP3-201ENST00000420996 FAM90A12PA8MX19 464 aa13.35□□□□□ -0.27
UPF3AP3-201ENST00000420996 FAM90A5PA8MXJ8 464 aa13.35□□□□□ -0.27
UPF3AP3-201ENST00000420996 CCDC159P0C7I6 412 aa13.35□□□□□ -0.27
UPF3AP3-201ENST00000420996 FAM90A15PP0C7V4 464 aa13.35□□□□□ -0.27
UPF3AP3-201ENST00000420996 FAM90A13PP0C7W8 464 aa13.35□□□□□ -0.27
UPF3AP3-201ENST00000420996 FAM90A14PP0C7W9 464 aa13.35□□□□□ -0.27
UPF3AP3-201ENST00000420996 FAM90A24PP0C7X0 464 aa13.35□□□□□ -0.27
UPF3AP3-201ENST00000420996 MYCNOSP40205 109 aa13.35□□□□□ -0.27
UPF3AP3-201ENST00000420996 KIR3DL2P43630 455 aa13.35□□□□□ -0.27
UPF3AP3-201ENST00000420996 OR3A4PP47883 348 aa13.35□□□□□ -0.27
UPF3AP3-201ENST00000420996 RBM39Q14498 530 aaKnown RBP13.35□□□□□ -0.27
UPF3AP3-201ENST00000420996 TMEM244Q5VVB8 128 aa13.35□□□□□ -0.27
UPF3AP3-201ENST00000420996 OR2W3Q7Z3T1 314 aa13.35□□□□□ -0.27
UPF3AP3-201ENST00000420996 CHPT1Q8WUD6 406 aa13.35□□□□□ -0.27
UPF3AP3-201ENST00000420996 UTP4Q969X6 686 aaKnown RBP13.35□□□□□ -0.27
UPF3AP3-201ENST00000420996 PCDHB16Q9NRJ7 776 aa13.35□□□□□ -0.27
UPF3AP3-201ENST00000420996 IGKV1-12A0A0C4DH73 117 aa13.34□□□□□ -0.27
UPF3AP3-201ENST00000420996 ZNF729A6NN14 1252 aaPredicted RBP13.34□□□□□ -0.27
UPF3AP3-201ENST00000420996 KDM4BO94953 1096 aa13.34□□□□□ -0.27
UPF3AP3-201ENST00000420996 IGKV1D-12P01611 117 aa13.34□□□□□ -0.27
UPF3AP3-201ENST00000420996 NHLRC4P0CG21 123 aaPredicted RBP13.34□□□□□ -0.27
UPF3AP3-201ENST00000420996 HTR1FP30939 366 aa13.34□□□□□ -0.27
UPF3AP3-201ENST00000420996 ISL1P61371 349 aa13.34□□□□□ -0.27
UPF3AP3-201ENST00000420996 C17orf58Q2M2W7 97 aa13.34□□□□□ -0.27
UPF3AP3-201ENST00000420996 KRBOX4Q5JUW0 171 aa13.34□□□□□ -0.27
UPF3AP3-201ENST00000420996 C8orf86Q6ZUL3 223 aa13.34□□□□□ -0.27
UPF3AP3-201ENST00000420996 RNF144BQ7Z419 303 aa13.34□□□□□ -0.27
UPF3AP3-201ENST00000420996 CHST4Q8NCG5 386 aa13.34□□□□□ -0.27
UPF3AP3-201ENST00000420996 OR10H4Q8NGA5 316 aa13.34□□□□□ -0.27
UPF3AP3-201ENST00000420996 RPEQ96AT9 228 aa13.34□□□□□ -0.27
UPF3AP3-201ENST00000420996 SPSB1Q96BD6 273 aa13.34□□□□□ -0.27
UPF3AP3-201ENST00000420996 FGGYQ96C11 551 aa13.34□□□□□ -0.27
UPF3AP3-201ENST00000420996 COQ2Q96H96 371 aa13.34□□□□□ -0.27
UPF3AP3-201ENST00000420996 OPALINQ96PE5 141 aa13.34□□□□□ -0.27
UPF3AP3-201ENST00000420996 P2RX4Q99571 388 aa13.34□□□□□ -0.27
UPF3AP3-201ENST00000420996 RHOFQ9HBH0 211 aa13.34□□□□□ -0.27
UPF3AP3-201ENST00000420996 NUDT19A8MXV4 375 aa13.33□□□□□ -0.28
UPF3AP3-201ENST00000420996 APOL3O95236 402 aa13.33□□□□□ -0.28
UPF3AP3-201ENST00000420996 SNRNP70P08621 437 aaKnown RBP13.33□□□□□ -0.28
UPF3AP3-201ENST00000420996 ZNF44P15621 663 aa13.33□□□□□ -0.28
UPF3AP3-201ENST00000420996 ZNF20P17024 532 aa13.33□□□□□ -0.28
UPF3AP3-201ENST00000420996 NFYBP25208 207 aa13.33□□□□□ -0.28
UPF3AP3-201ENST00000420996 ATP6V1E1P36543 226 aa13.33□□□□□ -0.28
UPF3AP3-201ENST00000420996 DGCR2P98153 550 aa13.33□□□□□ -0.28
UPF3AP3-201ENST00000420996 SCN1BQ07699 218 aa13.33□□□□□ -0.28
UPF3AP3-201ENST00000420996 UTF1Q5T230 341 aa13.33□□□□□ -0.28
UPF3AP3-201ENST00000420996 KDM4DQ6B0I6 523 aa13.33□□□□□ -0.28
UPF3AP3-201ENST00000420996 C18orf65Q6ZTR6 163 aa13.33□□□□□ -0.28
UPF3AP3-201ENST00000420996 COMMD1Q8N668 190 aa13.33□□□□□ -0.28
UPF3AP3-201ENST00000420996 C5orf56Q8N8D9 126 aa13.33□□□□□ -0.28
UPF3AP3-201ENST00000420996 CCDC197Q8NCU1 140 aa13.33□□□□□ -0.28
UPF3AP3-201ENST00000420996 OR9G1Q8NH87 305 aa13.33□□□□□ -0.28
UPF3AP3-201ENST00000420996 TOMM40LQ969M1 308 aa13.33□□□□□ -0.28
UPF3AP3-201ENST00000420996 RNF166Q96A37 237 aaPredicted RBP13.33□□□□□ -0.28
UPF3AP3-201ENST00000420996 RFT1Q96AA3 541 aa13.33□□□□□ -0.28
UPF3AP3-201ENST00000420996 NOL4LQ96MY1 436 aaPredicted RBP13.33□□□□□ -0.28
UPF3AP3-201ENST00000420996 OR6C3Q9NZP0 311 aa13.33□□□□□ -0.28
UPF3AP3-201ENST00000420996 GNG8Q9UK08 70 aa13.33□□□□□ -0.28
UPF3AP3-201ENST00000420996 POMPQ9Y244 141 aa13.33□□□□□ -0.28
UPF3AP3-201ENST00000420996 AMMECR1Q9Y4X0 333 aaPredicted RBP13.33□□□□□ -0.28
UPF3AP3-201ENST00000420996 KBTBD11-OT1A0A1B0GTJ5 212 aa13.32□□□□□ -0.28
UPF3AP3-201ENST00000420996 G3V2T6 193 aa13.32□□□□□ -0.28
UPF3AP3-201ENST00000420996 H0YHG0 523 aa13.32□□□□□ -0.28
UPF3AP3-201ENST00000420996 SLC33A1O00400 549 aaPredicted RBP13.32□□□□□ -0.28
UPF3AP3-201ENST00000420996 ISG15P05161 165 aa13.32□□□□□ -0.28
UPF3AP3-201ENST00000420996 CGB3P0DN86 165 aa13.32□□□□□ -0.28
UPF3AP3-201ENST00000420996 CGB7P0DN87 165 aa13.32□□□□□ -0.28
UPF3AP3-201ENST00000420996 TMED1Q13445 227 aa13.32□□□□□ -0.28
UPF3AP3-201ENST00000420996 TP53I3Q53FA7 332 aa13.32□□□□□ -0.28
UPF3AP3-201ENST00000420996 Q6P435 159 aa13.32□□□□□ -0.28
UPF3AP3-201ENST00000420996 FAM220AQ7Z4H9 259 aa13.32□□□□□ -0.28
UPF3AP3-201ENST00000420996 SAXO1Q8IYX7 474 aa13.32□□□□□ -0.28
UPF3AP3-201ENST00000420996 KLHL30-AS1Q8NEE0 82 aa13.32□□□□□ -0.28
UPF3AP3-201ENST00000420996 OR2G2Q8NGZ5 317 aa13.32□□□□□ -0.28
UPF3AP3-201ENST00000420996 OR56B4Q8NH76 319 aa13.32□□□□□ -0.28
UPF3AP3-201ENST00000420996 KIRREL1Q96J84 757 aa13.32□□□□□ -0.28
UPF3AP3-201ENST00000420996 MBOAT4Q96T53 435 aa13.32□□□□□ -0.28
UPF3AP3-201ENST00000420996 ING3Q9NXR8 418 aa13.32□□□□□ -0.28
UPF3AP3-201ENST00000420996 ENOPH1Q9UHY7 261 aa13.32□□□□□ -0.28
UPF3AP3-201ENST00000420996 U3KQK5 164 aa13.32□□□□□ -0.28
UPF3AP3-201ENST00000420996 SERPINE3A8MV23 424 aa13.31□□□□□ -0.28
UPF3AP3-201ENST00000420996 J3QR06 171 aa13.31□□□□□ -0.28
UPF3AP3-201ENST00000420996 DEGS1O15121 323 aa13.31□□□□□ -0.28
UPF3AP3-201ENST00000420996 GYG2O15488 501 aa13.31□□□□□ -0.28
UPF3AP3-201ENST00000420996 FGF16O43320 207 aa13.31□□□□□ -0.28
UPF3AP3-201ENST00000420996 RAMP3O60896 148 aa13.31□□□□□ -0.28
UPF3AP3-201ENST00000420996 MT-ND2P03891 347 aa13.31□□□□□ -0.28
UPF3AP3-201ENST00000420996 OCM2P0CE71 109 aa13.31□□□□□ -0.28
UPF3AP3-201ENST00000420996 OCMP0CE72 109 aaPredicted RBP13.31□□□□□ -0.28
UPF3AP3-201ENST00000420996 TMEM11P17152 192 aa13.31□□□□□ -0.28
UPF3AP3-201ENST00000420996 GP2P55259 537 aaKnown RBP13.31□□□□□ -0.28
UPF3AP3-201ENST00000420996 SLC35B1P78383 322 aa13.31□□□□□ -0.28
UPF3AP3-201ENST00000420996 ZNF85Q03923 595 aa13.31□□□□□ -0.28
UPF3AP3-201ENST00000420996 DNAL1Q4LDG9 190 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms