RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 SULT4A1Q9BR01 284 aa10.4□□□□□ -0.74
TMEM53-206ENST00000420706 FAAP24Q9BTP7 215 aa10.4□□□□□ -0.74
TMEM53-206ENST00000420706 DPCDQ9BVM2 203 aaPredicted RBP10.4□□□□□ -0.74
TMEM53-206ENST00000420706 PATZ1Q9HBE1 687 aaKnown RBP10.4□□□□□ -0.74
TMEM53-206ENST00000420706 CTSZQ9UBR2 303 aa10.4□□□□□ -0.74
TMEM53-206ENST00000420706 MIOXQ9UGB7 285 aa10.4□□□□□ -0.74
TMEM53-206ENST00000420706 ITGB1BP2Q9UKP3 347 aa10.4□□□□□ -0.74
TMEM53-206ENST00000420706 KCNK7Q9Y2U2 307 aa10.4□□□□□ -0.74
TMEM53-206ENST00000420706 SPG11Q96JI7 2443 aa10.4□□□□□ -0.74
TMEM53-206ENST00000420706 DCHS2Q6V1P9 2916 aa10.4□□□□□ -0.75
TMEM53-206ENST00000420706 FBN2P35556 2912 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 LRBAP50851 2863 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 UBE2QL1A1L167 161 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 FABP12A6NFH5 140 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 NKX6-3A6NJ46 265 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 MCRIP1C9JLW8 97 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 K7N7A8 449 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 MFNGO00587 321 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 TMPRSS2O15393 492 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 FCN3O75636 299 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 TK1P04183 234 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 SELLP14151 372 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 HIST1H1DP16402 221 aaKnown RBP10.39□□□□□ -0.75
TMEM53-206ENST00000420706 GNB3P16520 340 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 TALDO1P37837 337 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 ETV6P41212 452 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 MNDAP41218 407 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 TAS2R20P59543 309 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 IL13RA1P78552 427 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 MADCAM1Q13477 382 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 RBM39Q14498 530 aaKnown RBP10.39□□□□□ -0.75
TMEM53-206ENST00000420706 ARL6IP1Q15041 203 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 PAN3Q58A45 887 aaKnown RBP10.39□□□□□ -0.75
TMEM53-206ENST00000420706 Q5PR19 223 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 TMEM69Q5SWH9 247 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 SHEQ5VZ18 495 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 OLFML2AQ68BL7 652 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 ZNF841Q6ZN19 808 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 KRTAP1-3Q8IUG1 177 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 ASCC1Q8N9N2 400 aaKnown RBP10.39□□□□□ -0.75
TMEM53-206ENST00000420706 PPP1R35Q8TAP8 253 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 ST8SIA4Q92187 359 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 FOXC2Q99958 501 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 CHST6Q9GZX3 395 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 FAM234AQ9H0X4 552 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 NARFLQ9H6Q4 476 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 AUNIPQ9H7T9 357 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 ZMAT3Q9HA38 289 aaKnown RBP10.39□□□□□ -0.75
TMEM53-206ENST00000420706 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.39□□□□□ -0.75
TMEM53-206ENST00000420706 PCDHB10Q9UN67 800 aa10.39□□□□□ -0.75
TMEM53-206ENST00000420706 MRPS7Q9Y2R9 242 aaKnown RBP10.39□□□□□ -0.75
TMEM53-206ENST00000420706 NOTCH2Q04721 2471 aa10.38□□□□□ -0.75
TMEM53-206ENST00000420706 F5H0A9 414 aaPredicted RBP10.38□□□□□ -0.75
TMEM53-206ENST00000420706 HSPB6O14558 160 aa10.38□□□□□ -0.75
TMEM53-206ENST00000420706 NDUFB3O43676 98 aa10.38□□□□□ -0.75
TMEM53-206ENST00000420706 TPPPO94811 219 aa10.38□□□□□ -0.75
TMEM53-206ENST00000420706 MELTFP08582 738 aa10.38□□□□□ -0.75
TMEM53-206ENST00000420706 GSTP1P09211 210 aaKnown RBP10.38□□□□□ -0.75
TMEM53-206ENST00000420706 PTHLHP12272 177 aa10.38□□□□□ -0.75
TMEM53-206ENST00000420706 RPS2P15880 293 aaKnown RBP10.38□□□□□ -0.75
TMEM53-206ENST00000420706 SLC25A16P16260 332 aa10.38□□□□□ -0.75
TMEM53-206ENST00000420706 OR3A1P47881 315 aa10.38□□□□□ -0.75
TMEM53-206ENST00000420706 LMO4P61968 165 aa10.38□□□□□ -0.75
TMEM53-206ENST00000420706 FGFRL1Q8N441 504 aa10.38□□□□□ -0.75
TMEM53-206ENST00000420706 TMEM185AQ8NFB2 350 aa10.38□□□□□ -0.75
TMEM53-206ENST00000420706 OR5D13Q8NGL4 314 aa10.38□□□□□ -0.75
TMEM53-206ENST00000420706 CLDND2Q8NHS1 167 aa10.38□□□□□ -0.75
TMEM53-206ENST00000420706 PLPPR1Q8TBJ4 325 aa10.38□□□□□ -0.75
TMEM53-206ENST00000420706 NEIL1Q96FI4 390 aaPredicted RBP10.38□□□□□ -0.75
TMEM53-206ENST00000420706 ABHD1Q96SE0 405 aa10.38□□□□□ -0.75
TMEM53-206ENST00000420706 PPA2Q9H2U2 334 aa10.38□□□□□ -0.75
TMEM53-206ENST00000420706 RABL2AQ9UBK7 228 aaPredicted RBP10.38□□□□□ -0.75
TMEM53-206ENST00000420706 ELF5Q9UKW6 265 aaPredicted RBP10.38□□□□□ -0.75
TMEM53-206ENST00000420706 RABL2BQ9UNT1 228 aa10.38□□□□□ -0.75
TMEM53-206ENST00000420706 IGHV4-61A0A0C4DH41 118 aa10.37□□□□□ -0.75
TMEM53-206ENST00000420706 TMEM235A6NFC5 223 aa10.37□□□□□ -0.75
TMEM53-206ENST00000420706 DVL1O14640 695 aa10.37□□□□□ -0.75
TMEM53-206ENST00000420706 MGST3O14880 152 aa10.37□□□□□ -0.75
TMEM53-206ENST00000420706 CA11O75493 328 aa10.37□□□□□ -0.75
TMEM53-206ENST00000420706 IGHV2-5P01817 119 aa10.37□□□□□ -0.75
TMEM53-206ENST00000420706 CSN2P05814 226 aa10.37□□□□□ -0.75
TMEM53-206ENST00000420706 KCNJ3P48549 501 aa10.37□□□□□ -0.75
TMEM53-206ENST00000420706 LSAMPQ13449 338 aa10.37□□□□□ -0.75
TMEM53-206ENST00000420706 IL18Q14116 193 aa10.37□□□□□ -0.75
TMEM53-206ENST00000420706 GRK1Q15835 563 aa10.37□□□□□ -0.75
TMEM53-206ENST00000420706 PNLIPRP3Q17RR3 467 aa10.37□□□□□ -0.75
TMEM53-206ENST00000420706 LRRC10Q5BKY1 277 aa10.37□□□□□ -0.75
TMEM53-206ENST00000420706 PYHIN1Q6K0P9 492 aa10.37□□□□□ -0.75
TMEM53-206ENST00000420706 FAM131AQ6UXB0 335 aa10.37□□□□□ -0.75
TMEM53-206ENST00000420706 BAIAP2L2Q6UXY1 529 aa10.37□□□□□ -0.75
TMEM53-206ENST00000420706 OR8H2Q8N162 312 aa10.37□□□□□ -0.75
TMEM53-206ENST00000420706 OR8B3Q8NGG8 313 aa10.37□□□□□ -0.75
TMEM53-206ENST00000420706 NEK7Q8TDX7 302 aa10.37□□□□□ -0.75
TMEM53-206ENST00000420706 DYRK2Q92630 601 aa10.37□□□□□ -0.75
TMEM53-206ENST00000420706 OR8B2Q96RD0 313 aa10.37□□□□□ -0.75
TMEM53-206ENST00000420706 ETAA1Q9NY74 926 aa10.37□□□□□ -0.75
TMEM53-206ENST00000420706 SLC25A10Q9UBX3 287 aaPredicted RBP10.37□□□□□ -0.75
TMEM53-206ENST00000420706 AK3Q9UIJ7 227 aa10.37□□□□□ -0.75
TMEM53-206ENST00000420706 V9GYH0 126 aa10.37□□□□□ -0.75
TMEM53-206ENST00000420706 CELSR2Q9HCU4 2923 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms