RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 SLC22A6Q4U2R8 563 aa15.29■□□□□ 0.04
PTCD3-204ENST00000418628 HCP5Q6MZN7 132 aa15.29■□□□□ 0.04
PTCD3-204ENST00000418628 USP43Q70EL4 1123 aa15.29■□□□□ 0.04
PTCD3-204ENST00000418628 GDPD3Q7L5L3 318 aa15.29■□□□□ 0.04
PTCD3-204ENST00000418628 CMTM4Q8IZR5 234 aa15.29■□□□□ 0.04
PTCD3-204ENST00000418628 OR4M1Q8NGD0 313 aa15.29■□□□□ 0.04
PTCD3-204ENST00000418628 PPP1R35Q8TAP8 253 aa15.29■□□□□ 0.04
PTCD3-204ENST00000418628 SLC25A28Q96A46 364 aa15.29■□□□□ 0.04
PTCD3-204ENST00000418628 COQ2Q96H96 371 aa15.29■□□□□ 0.04
PTCD3-204ENST00000418628 Q96M66 194 aa15.29■□□□□ 0.04
PTCD3-204ENST00000418628 PPA2Q9H2U2 334 aa15.29■□□□□ 0.04
PTCD3-204ENST00000418628 RCC2Q9P258 522 aaKnown RBP15.29■□□□□ 0.04
PTCD3-204ENST00000418628 GHRLQ9UBU3 117 aa15.29■□□□□ 0.04
PTCD3-204ENST00000418628 TRAV1-2A0A0B4J238 106 aa15.28■□□□□ 0.04
PTCD3-204ENST00000418628 C17orf98A8MV24 154 aa15.28■□□□□ 0.04
PTCD3-204ENST00000418628 RNASEK-C17orf49H0YIS7 233 aa15.28■□□□□ 0.04
PTCD3-204ENST00000418628 GEMIN2O14893 280 aaKnown RBP15.28■□□□□ 0.04
PTCD3-204ENST00000418628 RBP4P02753 201 aa15.28■□□□□ 0.04
PTCD3-204ENST00000418628 CSTBP04080 98 aaKnown RBP15.28■□□□□ 0.04
PTCD3-204ENST00000418628 UBBP0CG47 229 aa15.28■□□□□ 0.04
PTCD3-204ENST00000418628 GTF2F2P13984 249 aa15.28■□□□□ 0.04
PTCD3-204ENST00000418628 PRTN3P24158 256 aa15.28■□□□□ 0.04
PTCD3-204ENST00000418628 P2RX3P56373 397 aa15.28■□□□□ 0.04
PTCD3-204ENST00000418628 BPIFB3P59826 476 aa15.28■□□□□ 0.04
PTCD3-204ENST00000418628 QRFPP83859 136 aa15.28■□□□□ 0.04
PTCD3-204ENST00000418628 TMEM104Q8NE00 496 aa15.28■□□□□ 0.04
PTCD3-204ENST00000418628 TSPAN14Q8NG11 270 aa15.28■□□□□ 0.04
PTCD3-204ENST00000418628 OR6M1Q8NGM8 313 aa15.28■□□□□ 0.04
PTCD3-204ENST00000418628 S100A13Q99584 98 aa15.28■□□□□ 0.04
PTCD3-204ENST00000418628 SLC6A7Q99884 636 aa15.28■□□□□ 0.04
PTCD3-204ENST00000418628 SLITRK2Q9H156 845 aa15.28■□□□□ 0.04
PTCD3-204ENST00000418628 PRDM13Q9H4Q3 707 aa15.28■□□□□ 0.04
PTCD3-204ENST00000418628 NCOR1P1Q9H4R4 102 aa15.28■□□□□ 0.04
PTCD3-204ENST00000418628 METTL8Q9H825 291 aaKnown RBP15.28■□□□□ 0.04
PTCD3-204ENST00000418628 PCDHB16Q9NRJ7 776 aa15.28■□□□□ 0.04
PTCD3-204ENST00000418628 STUB1Q9UNE7 303 aa15.28■□□□□ 0.04
PTCD3-204ENST00000418628 LINC00312Q9Y6C7 94 aa15.28■□□□□ 0.04
PTCD3-204ENST00000418628 A0A087WXM4 84 aa15.27■□□□□ 0.04
PTCD3-204ENST00000418628 FAM90A10PA6NDY2 464 aa15.27■□□□□ 0.04
PTCD3-204ENST00000418628 FAM90A18PA6NE21 464 aa15.27■□□□□ 0.04
PTCD3-204ENST00000418628 FAM90A16PA6NEW6 464 aa15.27■□□□□ 0.04
PTCD3-204ENST00000418628 FAM90A20PA6NIJ5 464 aa15.27■□□□□ 0.04
PTCD3-204ENST00000418628 FAM90A8PA6NJQ4 464 aa15.27■□□□□ 0.04
PTCD3-204ENST00000418628 FAM90A7PA6NKC0 464 aa15.27■□□□□ 0.04
PTCD3-204ENST00000418628 FAM90A22PA8MWA6 464 aa15.27■□□□□ 0.04
PTCD3-204ENST00000418628 FAM90A12PA8MX19 464 aa15.27■□□□□ 0.04
PTCD3-204ENST00000418628 FAM90A5PA8MXJ8 464 aa15.27■□□□□ 0.04
PTCD3-204ENST00000418628 FAM90A23PA8MXZ1 464 aa15.27■□□□□ 0.04
PTCD3-204ENST00000418628 SLC17A2O00624 439 aa15.27■□□□□ 0.04
PTCD3-204ENST00000418628 DEGS1O15121 323 aa15.27■□□□□ 0.04
PTCD3-204ENST00000418628 FAM90A15PP0C7V4 464 aa15.27■□□□□ 0.04
PTCD3-204ENST00000418628 FAM90A13PP0C7W8 464 aa15.27■□□□□ 0.04
PTCD3-204ENST00000418628 FAM90A14PP0C7W9 464 aa15.27■□□□□ 0.04
PTCD3-204ENST00000418628 FAM90A24PP0C7X0 464 aa15.27■□□□□ 0.04
PTCD3-204ENST00000418628 MGMTP16455 207 aa15.27■□□□□ 0.04
PTCD3-204ENST00000418628 CCL3L1P16619 93 aa15.27■□□□□ 0.04
PTCD3-204ENST00000418628 EDDM3BP56851 147 aa15.27■□□□□ 0.04
PTCD3-204ENST00000418628 NEDD8Q15843 81 aa15.27■□□□□ 0.04
PTCD3-204ENST00000418628 GPR157Q5UAW9 335 aa15.27■□□□□ 0.04
PTCD3-204ENST00000418628 BCL6BQ8N143 479 aaPredicted RBP15.27■□□□□ 0.04
PTCD3-204ENST00000418628 TPRX1Q8N7U7 411 aa15.27■□□□□ 0.04
PTCD3-204ENST00000418628 ZNF48Q96MX3 618 aaPredicted RBP15.27■□□□□ 0.04
PTCD3-204ENST00000418628 NR1H4Q96RI1 486 aaPredicted RBP15.27■□□□□ 0.04
PTCD3-204ENST00000418628 SIRT7Q9NRC8 400 aa15.27■□□□□ 0.04
PTCD3-204ENST00000418628 IGHV3OR16-10A0A075B7F0 116 aa15.26■□□□□ 0.03
PTCD3-204ENST00000418628 A0A0A6YYJ9 748 aa15.26■□□□□ 0.03
PTCD3-204ENST00000418628 IGHV1-69DA0A0B4J2H0 117 aa15.26■□□□□ 0.03
PTCD3-204ENST00000418628 IGHV1-69P01742 117 aa15.26■□□□□ 0.03
PTCD3-204ENST00000418628 VSIG8P0DPA2 414 aa15.26■□□□□ 0.03
PTCD3-204ENST00000418628 JUNBP17275 347 aaPredicted RBP15.26■□□□□ 0.03
PTCD3-204ENST00000418628 HTR2CP28335 458 aa15.26■□□□□ 0.03
PTCD3-204ENST00000418628 KCNJ3P48549 501 aa15.26■□□□□ 0.03
PTCD3-204ENST00000418628 DLX1P56177 255 aa15.26■□□□□ 0.03
PTCD3-204ENST00000418628 HILS1P60008 231 aa15.26■□□□□ 0.03
PTCD3-204ENST00000418628 UNC119Q13432 240 aa15.26■□□□□ 0.03
PTCD3-204ENST00000418628 EDDM3AQ14507 147 aa15.26■□□□□ 0.03
PTCD3-204ENST00000418628 RSBN1Q5VWQ0 802 aaPredicted RBP15.26■□□□□ 0.03
PTCD3-204ENST00000418628 RUSC1-AS1Q66K80 236 aa15.26■□□□□ 0.03
PTCD3-204ENST00000418628 BRD3OSQ6XYD6 125 aa15.26■□□□□ 0.03
PTCD3-204ENST00000418628 CORO2AQ92828 525 aa15.26■□□□□ 0.03
PTCD3-204ENST00000418628 LHX4Q969G2 390 aa15.26■□□□□ 0.03
PTCD3-204ENST00000418628 TXNL4BQ9NX01 149 aaKnown RBP15.26■□□□□ 0.03
PTCD3-204ENST00000418628 AK6Q9Y3D8 172 aaKnown RBP15.26■□□□□ 0.03
PTCD3-204ENST00000418628 A0A1W2PPH5 198 aa15.25■□□□□ 0.03
PTCD3-204ENST00000418628 hADV38S2A0JD32 116 aa15.25■□□□□ 0.03
PTCD3-204ENST00000418628 TMEM14DPA8MWL7 114 aa15.25■□□□□ 0.03
PTCD3-204ENST00000418628 BPNT1O95861 308 aa15.25■□□□□ 0.03
PTCD3-204ENST00000418628 ZNF728P0DKX0 622 aa15.25■□□□□ 0.03
PTCD3-204ENST00000418628 SMIM18P0DKX4 95 aa15.25■□□□□ 0.03
PTCD3-204ENST00000418628 AESQ08117 197 aa15.25■□□□□ 0.03
PTCD3-204ENST00000418628 KLRD1Q13241 179 aa15.25■□□□□ 0.03
PTCD3-204ENST00000418628 ATXN7L3Q14CW9 347 aaPredicted RBP15.25■□□□□ 0.03
PTCD3-204ENST00000418628 PAN3Q58A45 887 aaKnown RBP15.25■□□□□ 0.03
PTCD3-204ENST00000418628 NCR3LG1Q68D85 454 aa15.25■□□□□ 0.03
PTCD3-204ENST00000418628 SIGIRRQ6IA17 410 aa15.25■□□□□ 0.03
PTCD3-204ENST00000418628 C22orf42Q6IC83 251 aa15.25■□□□□ 0.03
PTCD3-204ENST00000418628 NR2C2APQ86WQ0 139 aa15.25■□□□□ 0.03
PTCD3-204ENST00000418628 SUMF2Q8NBJ7 301 aa15.25■□□□□ 0.03
PTCD3-204ENST00000418628 PLPPR1Q8TBJ4 325 aa15.25■□□□□ 0.03
PTCD3-204ENST00000418628 C22orf15Q8WYQ4 148 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms