RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 C1QL2Q7Z5L3 287 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 GVQW1Q8N7I0 195 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 EDARADDQ8WWZ3 215 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 AKR1E2Q96JD6 320 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 LPAR3Q9UBY5 353 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 ERRFI1Q9UJM3 462 aaPredicted RBP7.17□□□□□ -1.26
USP54-203ENST00000418501 FAM186AA6NE01 2351 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 TRBV6-6A0A0A6YYG2 114 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 DUXBA0A1W2PPF3 345 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 A0A1W2PPH5 198 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 C9orf170A2RU37 121 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 CRYZL1O95825 349 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 PGA5P0DJD9 388 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 AP2S1P53680 142 aaPredicted RBP7.17□□□□□ -1.26
USP54-203ENST00000418501 HLA-DRB3P79483 266 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 PLA2G7Q13093 441 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 DHRS2Q13268 280 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 GNMTQ14749 295 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 ZNF695Q8IW36 515 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 LRRC29Q8WV35 223 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 MITD1Q8WV92 249 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 RDH5Q92781 318 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 TMEM246Q9BRR3 403 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 SEBOXQ9HB31 216 aaPredicted RBP7.17□□□□□ -1.26
USP54-203ENST00000418501 GPR132Q9UNW8 380 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 MAB21L2Q9Y586 359 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 SESN1Q9Y6P5 492 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 ALPK2Q86TB3 2170 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 OOEPA6NGQ2 149 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 SIRPB1O00241 398 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 CDIPTO14735 213 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 CA7P43166 264 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 NKX2-5P52952 324 aaPredicted RBP7.17□□□□□ -1.26
USP54-203ENST00000418501 OR13C8Q8NGS7 320 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 HPSE2Q8WWQ2 592 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 GALMQ96C23 342 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 TMPRSS13Q9BYE2 586 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 A0A1W2PP11 408 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 SSX5O60225 188 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 PDGFAP04085 211 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 SFTPBP07988 381 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 GZMHP20718 246 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 NFYAP23511 347 aaPredicted RBP7.17□□□□□ -1.26
USP54-203ENST00000418501 TDGF1P3P51864 188 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 SNRPD2P62316 118 aaKnown RBP7.17□□□□□ -1.26
USP54-203ENST00000418501 ZNF474Q6S9Z5 364 aaPredicted RBP7.17□□□□□ -1.26
USP54-203ENST00000418501 OR8H1Q8NGG4 311 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 SULT4A1Q9BR01 284 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 OR6C3Q9NZP0 311 aa7.17□□□□□ -1.26
USP54-203ENST00000418501 HMSDA8MTL9 139 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 BET1O15155 118 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 SERPINE2P07093 398 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 ZNF250P15622 560 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 SORDQ00796 357 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 TSC22D1Q15714 1073 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 PLEKHF2Q9H8W4 249 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 RCC2Q9P258 522 aaKnown RBP7.16□□□□□ -1.26
USP54-203ENST00000418501 OPN4Q9UHM6 478 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 LAMP3Q9UQV4 416 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 OSGIN2Q9Y236 505 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 TNRC18O15417 2968 aaPredicted RBP7.16□□□□□ -1.26
USP54-203ENST00000418501 ERVH48-1M5A8F1 160 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 SCAF4O95104 1147 aaKnown RBP7.16□□□□□ -1.26
USP54-203ENST00000418501 ZBTB25P24278 435 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 GNRHRP30968 328 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 GABRA2P47869 451 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 VAMP2P63027 116 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 CALHM1Q8IU99 346 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 MUC20Q8N307 709 aaPredicted RBP7.16□□□□□ -1.26
USP54-203ENST00000418501 OR5M8Q8NGP6 311 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 PRR7Q8TB68 274 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 MRPL24Q96A35 216 aaKnown RBP7.16□□□□□ -1.26
USP54-203ENST00000418501 Q9N2K0 584 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 KCNS2Q9ULS6 477 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 CNOT1A5YKK6 2376 aaKnown RBP7.16□□□□□ -1.26
USP54-203ENST00000418501 A0A0A6YYD4 124 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 TRAV38-1A0A0B4J264 116 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 A0A0G2JNJ9 132 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 C5orf63A6NC05 138 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 SYNGR1O43759 233 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 OR2F2O95006 317 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 CELA3BP08861 270 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 M6PRP20645 277 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 OR2F1Q13607 317 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 SLC35E4Q6ICL7 350 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 DHRS11Q6UWP2 260 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 NLRC3Q7RTR2 1065 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 SLC36A1Q7Z2H8 476 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 TCTEX1D1Q8N7M0 179 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 BOLLQ8N9W6 283 aaKnown RBP7.16□□□□□ -1.26
USP54-203ENST00000418501 C2orf50Q96LR7 162 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 NRIP2Q9BQI9 281 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 DLL4Q9NR61 685 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 UFSP2Q9NUQ7 469 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 MTCH1Q9NZJ7 389 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 Q9UFV3 132 aa7.16□□□□□ -1.26
USP54-203ENST00000418501 IGKV1-27A0A075B6S5 117 aa7.15□□□□□ -1.26
USP54-203ENST00000418501 SDCBPO00560 298 aaPredicted RBP7.15□□□□□ -1.26
USP54-203ENST00000418501 LY86O95711 162 aa7.15□□□□□ -1.26
USP54-203ENST00000418501 ADH4P08319 380 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms