RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 GTF3AQ92664 365 aaKnown RBP16.3■□□□□ 0.2
RAB3IP-205ENST00000417413 TLNRD1Q9H1K6 362 aa16.3■□□□□ 0.2
RAB3IP-205ENST00000417413 SLA2Q9H6Q3 261 aa16.3■□□□□ 0.2
RAB3IP-205ENST00000417413 Q9N2K0 584 aa16.3■□□□□ 0.2
RAB3IP-205ENST00000417413 SPTA1P02549 2419 aa16.3■□□□□ 0.2
RAB3IP-205ENST00000417413 NOS1APO75052 506 aaPredicted RBP16.3■□□□□ 0.2
RAB3IP-205ENST00000417413 CRYAAP02489 173 aa16.3■□□□□ 0.2
RAB3IP-205ENST00000417413 ZNF250P15622 560 aa16.3■□□□□ 0.2
RAB3IP-205ENST00000417413 VAMP1P23763 118 aa16.3■□□□□ 0.2
RAB3IP-205ENST00000417413 SRSF4Q08170 494 aaKnown RBP16.3■□□□□ 0.2
RAB3IP-205ENST00000417413 ASCC1Q8N9N2 400 aaKnown RBP16.3■□□□□ 0.2
RAB3IP-205ENST00000417413 WDR13Q9H1Z4 485 aa16.3■□□□□ 0.2
RAB3IP-205ENST00000417413 MSL2Q9HCI7 577 aa16.3■□□□□ 0.2
RAB3IP-205ENST00000417413 CHMP1AQ9HD42 196 aaPredicted RBP16.3■□□□□ 0.2
RAB3IP-205ENST00000417413 IGHV3-64DA0A0J9YX35 117 aa16.29■□□□□ 0.2
RAB3IP-205ENST00000417413 HSPB6O14558 160 aa16.29■□□□□ 0.2
RAB3IP-205ENST00000417413 SFT2D2O95562 160 aa16.29■□□□□ 0.2
RAB3IP-205ENST00000417413 GLRXP35754 106 aa16.29■□□□□ 0.2
RAB3IP-205ENST00000417413 SUPT4H1P63272 117 aaKnown RBP16.29■□□□□ 0.2
RAB3IP-205ENST00000417413 LGALSLQ3ZCW2 172 aaPredicted RBP16.29■□□□□ 0.2
RAB3IP-205ENST00000417413 C11orf88Q6PI97 169 aa16.29■□□□□ 0.2
RAB3IP-205ENST00000417413 SPERTQ8NA61 448 aa16.29■□□□□ 0.2
RAB3IP-205ENST00000417413 POC1AQ8NBT0 407 aa16.29■□□□□ 0.2
RAB3IP-205ENST00000417413 OR5M8Q8NGP6 311 aa16.29■□□□□ 0.2
RAB3IP-205ENST00000417413 CASTOR1Q8WTX7 329 aa16.29■□□□□ 0.2
RAB3IP-205ENST00000417413 PHB2Q99623 299 aa16.29■□□□□ 0.2
RAB3IP-205ENST00000417413 DHRS9Q9BPW9 319 aa16.29■□□□□ 0.2
RAB3IP-205ENST00000417413 DPCDQ9BVM2 203 aaPredicted RBP16.29■□□□□ 0.2
RAB3IP-205ENST00000417413 GON7Q9BXV9 100 aa16.29■□□□□ 0.2
RAB3IP-205ENST00000417413 HES4Q9HCC6 221 aa16.29■□□□□ 0.2
RAB3IP-205ENST00000417413 SLC23A1Q9UHI7 598 aa16.29■□□□□ 0.2
RAB3IP-205ENST00000417413 SPEF1Q9Y4P9 236 aa16.29■□□□□ 0.2
RAB3IP-205ENST00000417413 PIEZO2Q9H5I5 2752 aa16.29■□□□□ 0.2
RAB3IP-205ENST00000417413 TLN1Q9Y490 2541 aaKnown RBP16.28■□□□□ 0.2
RAB3IP-205ENST00000417413 TRBV6-6A0A0A6YYG2 114 aa16.28■□□□□ 0.2
RAB3IP-205ENST00000417413 DBX1A6NMT0 343 aa16.28■□□□□ 0.2
RAB3IP-205ENST00000417413 DEGS1O15121 323 aa16.28■□□□□ 0.2
RAB3IP-205ENST00000417413 RGS11O94810 467 aa16.28■□□□□ 0.2
RAB3IP-205ENST00000417413 PGAM2P15259 253 aa16.28■□□□□ 0.2
RAB3IP-205ENST00000417413 RPS2P15880 293 aaKnown RBP16.28■□□□□ 0.2
RAB3IP-205ENST00000417413 ZNF146Q15072 292 aa16.28■□□□□ 0.2
RAB3IP-205ENST00000417413 LIN54Q6MZP7 749 aa16.28■□□□□ 0.2
RAB3IP-205ENST00000417413 LRP11Q86VZ4 500 aa16.28■□□□□ 0.2
RAB3IP-205ENST00000417413 RDH5Q92781 318 aa16.28■□□□□ 0.2
RAB3IP-205ENST00000417413 DMRTA2Q96SC8 542 aa16.28■□□□□ 0.2
RAB3IP-205ENST00000417413 USB1Q9BQ65 265 aaKnown RBP16.28■□□□□ 0.2
RAB3IP-205ENST00000417413 VKORC1Q9BQB6 163 aa16.28■□□□□ 0.2
RAB3IP-205ENST00000417413 TMPRSS13Q9BYE2 586 aa16.28■□□□□ 0.2
RAB3IP-205ENST00000417413 FXYD6Q9H0Q3 95 aa16.28■□□□□ 0.2
RAB3IP-205ENST00000417413 PLSCR5A0PG75 271 aa16.27■□□□□ 0.2
RAB3IP-205ENST00000417413 C16orf97H3BN30 126 aa16.27■□□□□ 0.2
RAB3IP-205ENST00000417413 HS3ST1O14792 307 aa16.27■□□□□ 0.2
RAB3IP-205ENST00000417413 ZNF205O95201 554 aa16.27■□□□□ 0.2
RAB3IP-205ENST00000417413 IGHV3-13P01766 116 aa16.27■□□□□ 0.2
RAB3IP-205ENST00000417413 CTSDP07339 412 aaPredicted RBP16.27■□□□□ 0.2
RAB3IP-205ENST00000417413 LPCAT3Q6P1A2 487 aa16.27■□□□□ 0.2
RAB3IP-205ENST00000417413 CLEC18BQ6UXF7 455 aa16.27■□□□□ 0.2
RAB3IP-205ENST00000417413 MRPL30Q8TCC3 161 aaKnown RBP16.27■□□□□ 0.2
RAB3IP-205ENST00000417413 NEK7Q8TDX7 302 aa16.27■□□□□ 0.2
RAB3IP-205ENST00000417413 RIMS4Q9H426 269 aaPredicted RBP16.27■□□□□ 0.2
RAB3IP-205ENST00000417413 ATMQ13315 3056 aa16.27■□□□□ 0.2
RAB3IP-205ENST00000417413 A0A0B4J2A0 478 aa16.27■□□□□ 0.19
RAB3IP-205ENST00000417413 ATP6V1G2-DDX39BF2Z307 99 aa16.27■□□□□ 0.19
RAB3IP-205ENST00000417413 NXPH2O95156 264 aa16.27■□□□□ 0.19
RAB3IP-205ENST00000417413 RBM39Q14498 530 aaKnown RBP16.27■□□□□ 0.19
RAB3IP-205ENST00000417413 PRAMEF6Q5VXH4 476 aa16.27■□□□□ 0.19
RAB3IP-205ENST00000417413 ZNF880Q6PDB4 577 aa16.27■□□□□ 0.19
RAB3IP-205ENST00000417413 ZNF826PQ6ZT77 177 aa16.27■□□□□ 0.19
RAB3IP-205ENST00000417413 TMEM171Q8WVE6 324 aa16.27■□□□□ 0.19
RAB3IP-205ENST00000417413 SHPKQ9UHJ6 478 aa16.27■□□□□ 0.19
RAB3IP-205ENST00000417413 C14orf166Q9Y224 244 aaKnown RBP16.27■□□□□ 0.19
RAB3IP-205ENST00000417413 ACACBO00763 2458 aa16.26■□□□□ 0.19
RAB3IP-205ENST00000417413 BSNQ9UPA5 3926 aa16.26■□□□□ 0.19
RAB3IP-205ENST00000417413 TRGV8A0A0C4DH27 118 aa16.26■□□□□ 0.19
RAB3IP-205ENST00000417413 CCSO14618 274 aa16.26■□□□□ 0.19
RAB3IP-205ENST00000417413 OR2H2O95918 312 aa16.26■□□□□ 0.19
RAB3IP-205ENST00000417413 ZNF44P15621 663 aa16.26■□□□□ 0.19
RAB3IP-205ENST00000417413 CD40P25942 277 aa16.26■□□□□ 0.19
RAB3IP-205ENST00000417413 FCGR2CP31995 323 aa16.26■□□□□ 0.19
RAB3IP-205ENST00000417413 IGSF11Q5DX21 431 aa16.26■□□□□ 0.19
RAB3IP-205ENST00000417413 WDR82Q6UXN9 313 aa16.26■□□□□ 0.19
RAB3IP-205ENST00000417413 C20orf204Q6ZNR8 217 aa16.26■□□□□ 0.19
RAB3IP-205ENST00000417413 C5orf24Q7Z6I8 188 aa16.26■□□□□ 0.19
RAB3IP-205ENST00000417413 RND1Q92730 232 aa16.26■□□□□ 0.19
RAB3IP-205ENST00000417413 CHD3Q12873 2000 aaKnown RBP16.25■□□□□ 0.19
RAB3IP-205ENST00000417413 IGLV3-9A0A075B6K5 115 aa16.25■□□□□ 0.19
RAB3IP-205ENST00000417413 SLC33A1O00400 549 aaPredicted RBP16.25■□□□□ 0.19
RAB3IP-205ENST00000417413 CD8AP01732 235 aa16.25■□□□□ 0.19
RAB3IP-205ENST00000417413 SLC9A3R2Q15599 337 aa16.25■□□□□ 0.19
RAB3IP-205ENST00000417413 SPIN3Q5JUX0 258 aa16.25■□□□□ 0.19
RAB3IP-205ENST00000417413 SHEQ5VZ18 495 aa16.25■□□□□ 0.19
RAB3IP-205ENST00000417413 KCTD9Q7L273 389 aa16.25■□□□□ 0.19
RAB3IP-205ENST00000417413 MOB3AQ96BX8 217 aa16.25■□□□□ 0.19
RAB3IP-205ENST00000417413 CLEC4MQ9H2X3 399 aaPredicted RBP16.25■□□□□ 0.19
RAB3IP-205ENST00000417413 DUSP13Q9UII6 198 aa16.25■□□□□ 0.19
RAB3IP-205ENST00000417413 ATP23Q9Y6H3 246 aa16.25■□□□□ 0.19
RAB3IP-205ENST00000417413 TPRP12270 2363 aaKnown RBP16.25■□□□□ 0.19
RAB3IP-205ENST00000417413 TRDCB7Z8K6 153 aa16.24■□□□□ 0.19
RAB3IP-205ENST00000417413 SIRPB1O00241 398 aa16.24■□□□□ 0.19
RAB3IP-205ENST00000417413 SH2D1BO14796 132 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms