RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 ADI1Q9BV57 179 aa12.14□□□□□ -0.47
DDX56-202ENST00000415758 COMMD4Q9H0A8 199 aa12.14□□□□□ -0.47
DDX56-202ENST00000415758 EXOSC4Q9NPD3 245 aaKnown RBP12.14□□□□□ -0.47
DDX56-202ENST00000415758 METTL15A6NJ78 407 aa12.13□□□□□ -0.47
DDX56-202ENST00000415758 ZNF729A6NN14 1252 aaPredicted RBP12.13□□□□□ -0.47
DDX56-202ENST00000415758 SERPINE3A8MV23 424 aa12.13□□□□□ -0.47
DDX56-202ENST00000415758 H3BSH0 61 aa12.13□□□□□ -0.47
DDX56-202ENST00000415758 CCL24O00175 119 aa12.13□□□□□ -0.47
DDX56-202ENST00000415758 SNRNP70P08621 437 aaKnown RBP12.13□□□□□ -0.47
DDX56-202ENST00000415758 CGB3P0DN86 165 aa12.13□□□□□ -0.47
DDX56-202ENST00000415758 CGB7P0DN87 165 aa12.13□□□□□ -0.47
DDX56-202ENST00000415758 CALCBP10092 127 aa12.13□□□□□ -0.47
DDX56-202ENST00000415758 PRKACBP22694 351 aa12.13□□□□□ -0.47
DDX56-202ENST00000415758 MTCP1P56278 107 aa12.13□□□□□ -0.47
DDX56-202ENST00000415758 SLC35B1P78383 322 aa12.13□□□□□ -0.47
DDX56-202ENST00000415758 UTS2BQ765I0 119 aa12.13□□□□□ -0.47
DDX56-202ENST00000415758 PRSS35Q8N3Z0 413 aa12.13□□□□□ -0.47
DDX56-202ENST00000415758 TCEANCQ8N8B7 351 aa12.13□□□□□ -0.47
DDX56-202ENST00000415758 CHST4Q8NCG5 386 aa12.13□□□□□ -0.47
DDX56-202ENST00000415758 TMEM163Q8TC26 289 aa12.13□□□□□ -0.47
DDX56-202ENST00000415758 RPEQ96AT9 228 aa12.13□□□□□ -0.47
DDX56-202ENST00000415758 CCDC124Q96CT7 223 aaKnown RBP12.13□□□□□ -0.47
DDX56-202ENST00000415758 COQ2Q96H96 371 aa12.13□□□□□ -0.47
DDX56-202ENST00000415758 RAX2Q96IS3 184 aa12.13□□□□□ -0.47
DDX56-202ENST00000415758 RHOFQ9HBH0 211 aa12.13□□□□□ -0.47
DDX56-202ENST00000415758 GSTK1Q9Y2Q3 226 aa12.13□□□□□ -0.47
DDX56-202ENST00000415758 IGKV1-12A0A0C4DH73 117 aa12.12□□□□□ -0.47
DDX56-202ENST00000415758 KBTBD11-OT1A0A1B0GTJ5 212 aa12.12□□□□□ -0.47
DDX56-202ENST00000415758 A0A1W2PQL4 384 aaPredicted RBP12.12□□□□□ -0.47
DDX56-202ENST00000415758 KDM4BO94953 1096 aa12.12□□□□□ -0.47
DDX56-202ENST00000415758 IGKV1D-12P01611 117 aa12.12□□□□□ -0.47
DDX56-202ENST00000415758 OR2T7P0C7T2 308 aa12.12□□□□□ -0.47
DDX56-202ENST00000415758 UBCP0CG48 685 aaKnown RBP12.12□□□□□ -0.47
DDX56-202ENST00000415758 ATF1P18846 271 aa12.12□□□□□ -0.47
DDX56-202ENST00000415758 CALB2P22676 271 aa12.12□□□□□ -0.47
DDX56-202ENST00000415758 POU3F4P49335 361 aa12.12□□□□□ -0.47
DDX56-202ENST00000415758 DAPP51397 102 aa12.12□□□□□ -0.47
DDX56-202ENST00000415758 SNU13P55769 128 aaKnown RBP12.12□□□□□ -0.47
DDX56-202ENST00000415758 RBM39Q14498 530 aaKnown RBP12.12□□□□□ -0.47
DDX56-202ENST00000415758 KLHL22Q53GT1 634 aa12.12□□□□□ -0.47
DDX56-202ENST00000415758 KRBOX4Q5JUW0 171 aa12.12□□□□□ -0.47
DDX56-202ENST00000415758 LHFPL2Q6ZUX7 228 aa12.12□□□□□ -0.47
DDX56-202ENST00000415758 GID4Q8IVV7 300 aa12.12□□□□□ -0.47
DDX56-202ENST00000415758 STPG2Q8N412 459 aa12.12□□□□□ -0.47
DDX56-202ENST00000415758 OR56B4Q8NH76 319 aa12.12□□□□□ -0.47
DDX56-202ENST00000415758 TOMM40LQ969M1 308 aa12.12□□□□□ -0.47
DDX56-202ENST00000415758 ADAT3Q96EY9 351 aaPredicted RBP12.12□□□□□ -0.47
DDX56-202ENST00000415758 KIRREL1Q96J84 757 aa12.12□□□□□ -0.47
DDX56-202ENST00000415758 LINC00574Q9H8X3 128 aa12.12□□□□□ -0.47
DDX56-202ENST00000415758 OR6C3Q9NZP0 311 aa12.12□□□□□ -0.47
DDX56-202ENST00000415758 AMMECR1Q9Y4X0 333 aaPredicted RBP12.12□□□□□ -0.47
DDX56-202ENST00000415758 LOC107986453A0A1B0GWG9 222 aa12.11□□□□□ -0.47
DDX56-202ENST00000415758 A0A1W2PPI3 338 aa12.11□□□□□ -0.47
DDX56-202ENST00000415758 J3QR06 171 aa12.11□□□□□ -0.47
DDX56-202ENST00000415758 M0R129 80 aa12.11□□□□□ -0.47
DDX56-202ENST00000415758 T-ENOLP0DO92 83 aa12.11□□□□□ -0.47
DDX56-202ENST00000415758 ISL1P61371 349 aa12.11□□□□□ -0.47
DDX56-202ENST00000415758 C9orf66Q5T8R8 295 aa12.11□□□□□ -0.47
DDX56-202ENST00000415758 C12orf73Q69YU5 71 aa12.11□□□□□ -0.47
DDX56-202ENST00000415758 Q6P435 159 aa12.11□□□□□ -0.47
DDX56-202ENST00000415758 TEX38Q6PEX7 206 aa12.11□□□□□ -0.47
DDX56-202ENST00000415758 SLC35E3Q7Z769 313 aa12.11□□□□□ -0.47
DDX56-202ENST00000415758 FOXRED2Q8IWF2 684 aa12.11□□□□□ -0.47
DDX56-202ENST00000415758 OR8H3Q8N146 312 aa12.11□□□□□ -0.47
DDX56-202ENST00000415758 DRAM1Q8N682 238 aa12.11□□□□□ -0.47
DDX56-202ENST00000415758 RNF166Q96A37 237 aaPredicted RBP12.11□□□□□ -0.47
DDX56-202ENST00000415758 SPSB1Q96BD6 273 aa12.11□□□□□ -0.47
DDX56-202ENST00000415758 DUX3Q96PT4 197 aa12.11□□□□□ -0.47
DDX56-202ENST00000415758 TBX5Q99593 518 aa12.11□□□□□ -0.47
DDX56-202ENST00000415758 NCOR1P1Q9H4R4 102 aa12.11□□□□□ -0.47
DDX56-202ENST00000415758 DCLRE1BQ9H816 532 aa12.11□□□□□ -0.47
DDX56-202ENST00000415758 WARS2Q9UGM6 360 aaKnown RBP12.11□□□□□ -0.47
DDX56-202ENST00000415758 LINC00527Q9UJ94 153 aa12.11□□□□□ -0.47
DDX56-202ENST00000415758 TENM2Q9NT68 2774 aa12.1□□□□□ -0.47
DDX56-202ENST00000415758 ZAR1LA6NP61 321 aa12.1□□□□□ -0.47
DDX56-202ENST00000415758 SLC33A1O00400 549 aaPredicted RBP12.1□□□□□ -0.47
DDX56-202ENST00000415758 FKBP6O75344 327 aa12.1□□□□□ -0.47
DDX56-202ENST00000415758 FAM107AO95990 144 aa12.1□□□□□ -0.47
DDX56-202ENST00000415758 MT-ND2P03891 347 aa12.1□□□□□ -0.47
DDX56-202ENST00000415758 TMEM11P17152 192 aa12.1□□□□□ -0.47
DDX56-202ENST00000415758 NFYBP25208 207 aa12.1□□□□□ -0.47
DDX56-202ENST00000415758 CHATP28329 748 aa12.1□□□□□ -0.47
DDX56-202ENST00000415758 RAB7AP51149 207 aa12.1□□□□□ -0.47
DDX56-202ENST00000415758 EBI3Q14213 229 aa12.1□□□□□ -0.47
DDX56-202ENST00000415758 KIR2DS1Q14954 304 aa12.1□□□□□ -0.47
DDX56-202ENST00000415758 SAXO1Q8IYX7 474 aa12.1□□□□□ -0.47
DDX56-202ENST00000415758 RDH10Q8IZV5 341 aa12.1□□□□□ -0.47
DDX56-202ENST00000415758 RNF152Q8N8N0 203 aa12.1□□□□□ -0.47
DDX56-202ENST00000415758 ZNF565Q8N9K5 539 aa12.1□□□□□ -0.47
DDX56-202ENST00000415758 OR5M8Q8NGP6 311 aa12.1□□□□□ -0.47
DDX56-202ENST00000415758 OR8U1Q8NH10 309 aa12.1□□□□□ -0.47
DDX56-202ENST00000415758 HRASLS5Q96KN8 279 aa12.1□□□□□ -0.47
DDX56-202ENST00000415758 OPALINQ96PE5 141 aa12.1□□□□□ -0.47
DDX56-202ENST00000415758 PRR25Q96S07 402 aa12.1□□□□□ -0.47
DDX56-202ENST00000415758 SCOCQ9UIL1 159 aa12.1□□□□□ -0.47
DDX56-202ENST00000415758 RYR2Q92736 4967 aa12.1□□□□□ -0.47
DDX56-202ENST00000415758 ISG15P05161 165 aa12.09□□□□□ -0.47
DDX56-202ENST00000415758 ZNF44P15621 663 aa12.09□□□□□ -0.47
DDX56-202ENST00000415758 EPHA2P29317 976 aa12.09□□□□□ -0.47
DDX56-202ENST00000415758 KIR3DL2P43630 455 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms