RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 C3orf85A0A1B0GTC6 90 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 DUXBA0A1W2PPF3 345 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 CDRT15L2A8MXV6 281 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 TRDCB7Z8K6 153 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 AP4M1O00189 453 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 MPPED1O15442 326 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 PHF1O43189 567 aaPredicted RBP8.46□□□□□ -1.06
CD44-206ENST00000415148 IGKV1D-12P01611 117 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 KLK3P07288 261 aaPredicted RBP8.46□□□□□ -1.06
CD44-206ENST00000415148 COX6A1P12074 109 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 EIF2S3P41091 472 aaKnown RBP8.46□□□□□ -1.06
CD44-206ENST00000415148 RBM11P57052 281 aaKnown RBP8.46□□□□□ -1.06
CD44-206ENST00000415148 RND3P61587 244 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 RIPPLY2Q5TAB7 128 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 ZNF774Q6NX45 483 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 BATF2Q8N1L9 274 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 OR5L1Q8NGL2 311 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 NAT6Q93015 286 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 BOD1Q96IK1 185 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 TMEM56Q96MV1 263 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 GPHA2Q96T91 129 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 SPIN2AQ99865 258 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 SPIN2BQ9BPZ2 258 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 GGACTQ9BVM4 153 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 SRXN1Q9BYN0 137 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 AKIRIN1Q9H9L7 192 aaPredicted RBP8.46□□□□□ -1.06
CD44-206ENST00000415148 UNKLQ9H9P5 680 aaKnown RBP8.46□□□□□ -1.06
CD44-206ENST00000415148 OCIAD1Q9NX40 245 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 TMEM56-RWDD3S4R434 201 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 hCG_38984A0A1B0GV85 526 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 K7N7A8 449 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 SLC33A1O00400 549 aaPredicted RBP8.46□□□□□ -1.06
CD44-206ENST00000415148 LY86O95711 162 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 UMODP07911 640 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 MMP9P14780 707 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 ZNF32P17041 273 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 ITGA3P26006 1051 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 RGS19P49795 217 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 MLF1P58340 268 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 EWSR1Q01844 656 aaKnown RBP eCLIP8.46□□□□□ -1.06
CD44-206ENST00000415148 PIGYQ3MUY2 71 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 PYY3Q5JQD4 70 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 OR2B11Q5JQS5 317 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 WDR5BQ86VZ2 330 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 RPS19BP1Q86WX3 136 aaKnown RBP8.46□□□□□ -1.06
CD44-206ENST00000415148 C1QL4Q86Z23 238 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 OR2C3Q8N628 320 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 ZNF565Q8N9K5 539 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 FAM213BQ8TBF2 198 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 SAP25Q8TEE9 199 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 MR1Q95460 341 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 SPSB4Q96A44 273 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 PAPOLGQ9BWT3 736 aaKnown RBP8.46□□□□□ -1.06
CD44-206ENST00000415148 SLC25A31Q9H0C2 315 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 TMEM222Q9H0R3 208 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 PLEKHF2Q9H8W4 249 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 CRLF2Q9HC73 371 aa8.46□□□□□ -1.06
CD44-206ENST00000415148 ZNF816-ZNF321PA0A0X1KG74 233 aa8.45□□□□□ -1.06
CD44-206ENST00000415148 CLEC18AA5D8T8 446 aa8.45□□□□□ -1.06
CD44-206ENST00000415148 RPL36A-HNRNPH2H7BZ11 118 aa8.45□□□□□ -1.06
CD44-206ENST00000415148 PITX3O75364 302 aa8.45□□□□□ -1.06
CD44-206ENST00000415148 PPYP01298 95 aa8.45□□□□□ -1.06
CD44-206ENST00000415148 CELA2AP08217 269 aa8.45□□□□□ -1.06
CD44-206ENST00000415148 CXCL1P09341 107 aa8.45□□□□□ -1.06
CD44-206ENST00000415148 AADACP22760 399 aa8.45□□□□□ -1.06
CD44-206ENST00000415148 SRD5A2P31213 254 aa8.45□□□□□ -1.06
CD44-206ENST00000415148 HTR5AP47898 357 aa8.45□□□□□ -1.06
CD44-206ENST00000415148 CARD18P57730 90 aa8.45□□□□□ -1.06
CD44-206ENST00000415148 B3GALT5-AS1P59052 145 aa8.45□□□□□ -1.06
CD44-206ENST00000415148 PSG4Q00888 419 aa8.45□□□□□ -1.06
CD44-206ENST00000415148 CLINT1Q14677 625 aa8.45□□□□□ -1.06
CD44-206ENST00000415148 GFI1BQ5VTD9 330 aa8.45□□□□□ -1.06
CD44-206ENST00000415148 ZNF600Q6ZNG1 722 aa8.45□□□□□ -1.06
CD44-206ENST00000415148 SLC35G3Q8N808 338 aa8.45□□□□□ -1.06
CD44-206ENST00000415148 CLEC18CQ8NCF0 446 aa8.45□□□□□ -1.06
CD44-206ENST00000415148 AGBL5Q8NDL9 886 aa8.45□□□□□ -1.06
CD44-206ENST00000415148 CLDN23Q96B33 292 aa8.45□□□□□ -1.06
CD44-206ENST00000415148 SGCZQ96LD1 299 aa8.45□□□□□ -1.06
CD44-206ENST00000415148 HIPK2Q9H2X6 1198 aa8.45□□□□□ -1.06
CD44-206ENST00000415148 FRYQ5TBA9 3013 aa8.45□□□□□ -1.06
CD44-206ENST00000415148 PIGBOS1A0A0B4J2F0 54 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 ZNF716A6NP11 495 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 K7ESF4 209 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 HSPA12AO43301 675 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 CXCL12P48061 93 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 CEBPGP53567 150 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 CLDN15P56746 228 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 FOXO1Q12778 655 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 NRN1LQ496H8 165 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 TRIM61Q5EBN2 209 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 HEPN1Q6WQI6 88 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 SPNS3Q6ZMD2 512 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 AAED1Q7RTV5 226 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 DPPA2Q7Z7J5 298 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 SAXO1Q8IYX7 474 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 OR14L1PQ8NHC6 308 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 SLAMF9Q96A28 289 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 TP53RKQ96S44 253 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 FOXB1Q99853 325 aa8.44□□□□□ -1.06
CD44-206ENST00000415148 OR2H1Q9GZK4 316 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms