RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 OR2T27Q8NH04 317 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR4Q3Q8NH05 313 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR5W2Q8NH69 310 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR1F12Q8NHA8 337 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR2V1Q8NHB1 315 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 STOML3Q8TAV4 291 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 RPS4Y2Q8TD47 263 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 NEK7Q8TDX7 302 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 CA5BP1Q8WTZ4 195 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 TFGQ92734 400 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 TCEAL3Q969E4 200 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 TSACCQ96A04 125 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 TMEM159Q96B96 161 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 SMIM19Q96E16 107 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 S100A16Q96FQ6 103 aaKnown RBP3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 FAHD2AQ96GK7 314 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 CXorf58Q96LI9 332 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZNF75AQ96N20 296 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 TSSK2Q96PF2 358 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 C12orf57Q99622 126 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 NDUFAF3Q9BU61 184 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZNF426Q9BUY5 554 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 LRRC61Q9BV99 259 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 TMED9Q9BVK6 235 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 SEC11CQ9BY50 192 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 ARL6Q9H0F7 186 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 SLITRK2Q9H156 845 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 METTL9Q9H1A3 318 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 TUBA4BQ9H853 241 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 Q9H8V8 135 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 NOX3Q9HBY0 568 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 HRASLSQ9HDD0 168 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 CMC2Q9NRP2 79 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 TEX10Q9NXF1 929 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 WDR83OSQ9Y284 106 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 SLC35A3Q9Y2D2 325 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 PRG3Q9Y2Y8 225 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 TMED3Q9Y3Q3 217 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 TIMM10BQ9Y5J6 103 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 CSAG2Q9Y5P2 127 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 PCNX3Q9H6A9 2034 aa3.01□□□□□ -1.93
HMGB3P23-201ENST00000414981 TDRD15B5MCY1 1934 aaKnown RBP3□□□□□ -1.93
HMGB3P23-201ENST00000414981 TRAV24A0A0B4J272 114 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 TRBV7-9A0A0J9YWB2 115 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 A0A1W2PNV4 684 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 TSPAN11A1L157 253 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 VSTM2BA6NLU5 285 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZNF729A6NN14 1252 aaPredicted RBP3□□□□□ -1.93
HMGB3P23-201ENST00000414981 IFITM5A6NNB3 132 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR2AT4A6NND4 320 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 C2orf74A8MZ97 194 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 ANHXE9PGG2 379 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 F5H5P2 479 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 H0YL77 283 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 CLDN34H7C241 214 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 H7C417 338 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 M0R129 80 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 SOCS3O14543 225 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 PHYHO14832 338 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 FGF16O43320 207 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 CHST1O43916 411 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 EIF4E2O60573 245 aaKnown RBP3□□□□□ -1.93
HMGB3P23-201ENST00000414981 CTNSO60931 367 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 DUSP11O75319 330 aaKnown RBP3□□□□□ -1.93
HMGB3P23-201ENST00000414981 FCN3O75636 299 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 SCGNO76038 276 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 SOX14O95416 240 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 C1orf105O95561 183 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 IGF2P01344 180 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 IFNGP01579 166 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 APOC3P02656 99 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 ALDOBP05062 364 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR12D1P0DN82 309 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 ERGP11308 486 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 GP9P14770 177 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 PVALBP20472 110 aaPredicted RBP3□□□□□ -1.93
HMGB3P23-201ENST00000414981 KITLGP21583 273 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 GATA2P23769 480 aaPredicted RBP3□□□□□ -1.93
HMGB3P23-201ENST00000414981 ATP5A1P25705 553 aaKnown RBP3□□□□□ -1.93
HMGB3P23-201ENST00000414981 IMPA1P29218 277 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 NTSP30990 170 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 MAP3K8P41279 467 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 RBM34P42696 430 aaKnown RBP3□□□□□ -1.93
HMGB3P23-201ENST00000414981 CSNK1A1P48729 337 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 PRLHRP49683 370 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 HCCSP53701 268 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 TMEM50BP56557 158 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 VSX2P58304 361 aaPredicted RBP3□□□□□ -1.93
HMGB3P23-201ENST00000414981 TAS2R41P59536 307 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 CCL7P80098 99 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 EWSR1Q01844 656 aaKnown RBP eCLIP3□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZP4Q12836 540 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 PON3Q15166 354 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 SLC9A3R2Q15599 337 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 GUK1Q16774 197 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZNF658BQ4V348 819 aaPredicted RBP3□□□□□ -1.93
HMGB3P23-201ENST00000414981 VWA2Q5GFL6 755 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 ACER2Q5QJU3 275 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 AVPI1Q5T686 147 aa3□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZNF343Q6P1L6 599 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms