RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 UGT2B15P54855 530 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 NCALDP61601 193 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 RPL36AP83881 106 aaKnown RBP1.98□□□□□ -2.09
MCF2-204ENST00000414978 TPBGQ13641 420 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 TTLL9Q3SXZ7 439 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 PRSS41Q7RTY9 318 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 OAFQ86UD1 273 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 C9orf40Q8IXQ3 194 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 DCUN1D1Q96GG9 259 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 ADTRPQ96IZ2 230 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 BIRC8Q96P09 236 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 PRRT1Q99946 306 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 VGLL1Q99990 258 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 ZNF696Q9H7X3 374 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 EXOSC3Q9NQT5 275 aaKnown RBP1.98□□□□□ -2.09
MCF2-204ENST00000414978 CTPS2Q9NRF8 586 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 GOLGA4Q13439 2230 aaKnown RBP1.98□□□□□ -2.09
MCF2-204ENST00000414978 SEC14L6B5MCN3 397 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 hCG_2039718K7EN88 272 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 BMPR1BO00238 502 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 HAT1O14929 419 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 ICOSLGO75144 302 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 WISP3O95389 354 aaPredicted RBP1.98□□□□□ -2.09
MCF2-204ENST00000414978 NQO1P15559 274 aaKnown RBP1.98□□□□□ -2.09
MCF2-204ENST00000414978 RPS3P23396 243 aaKnown RBP eCLIP1.98□□□□□ -2.09
MCF2-204ENST00000414978 IL12AP29459 219 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 SPINT3P49223 89 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 GNG10P50151 68 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 MNAT1P51948 309 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 NAA20P61599 178 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 DGCR6Q14129 220 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 OR4D1Q15615 310 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 TSNQ15631 228 aaKnown RBP1.98□□□□□ -2.09
MCF2-204ENST00000414978 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.98□□□□□ -2.09
MCF2-204ENST00000414978 THOC7Q6I9Y2 204 aaKnown RBP1.98□□□□□ -2.09
MCF2-204ENST00000414978 OR2T5Q6IEZ7 315 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 Q6ZSR6 202 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 CPNE9Q8IYJ1 553 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 VKORC1L1Q8N0U8 176 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 TMEM252Q8N6L7 170 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 OR2T29Q8NH02 315 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 FLVCR1-AS1Q8TAF5 88 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 CD200R1Q8TD46 325 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 EEF1AKMT1Q8WVE0 214 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 ITLN1Q8WWA0 313 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 GTF3AQ92664 365 aaKnown RBP1.98□□□□□ -2.09
MCF2-204ENST00000414978 RBMXL1Q96E39 390 aaKnown RBP1.98□□□□□ -2.09
MCF2-204ENST00000414978 SEC22AQ96IW7 307 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 KIR2DL4Q99706 377 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 SOSTQ9BQB4 213 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 EBF4Q9BQW3 602 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 SYT4Q9H2B2 425 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 PATZ1Q9HBE1 687 aaKnown RBP1.98□□□□□ -2.09
MCF2-204ENST00000414978 ABCB10Q9NRK6 738 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 INIPQ9NRY2 104 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 CD274Q9NZQ7 290 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 FIS1Q9Y3D6 152 aa1.98□□□□□ -2.09
MCF2-204ENST00000414978 GYG2O15488 501 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 SLC25A14O95258 325 aaPredicted RBP1.97□□□□□ -2.09
MCF2-204ENST00000414978 OR56A5P0C7T3 313 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 NTSP30990 170 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 KDELR2P33947 212 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 KRTAP10-9P60411 292 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 VBP1P61758 197 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 CXCL6P80162 114 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 STX4Q12846 297 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 RBMY1FQ15415 496 aaKnown RBP1.97□□□□□ -2.09
MCF2-204ENST00000414978 USF2Q15853 346 aaPredicted RBP1.97□□□□□ -2.09
MCF2-204ENST00000414978 ZNF678Q5SXM1 525 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 METTL21CQ5VZV1 264 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 FRMPD2BQ6IN97 320 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 EPGNQ6UW88 154 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 GPR151Q8TDV0 419 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 SKA2Q8WVK7 121 aaPredicted RBP1.97□□□□□ -2.09
MCF2-204ENST00000414978 IL1F10Q8WWZ1 152 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 FAM3DQ96BQ1 224 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 CMTM5Q96DZ9 223 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 L3HYPDHQ96EM0 354 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 SIGLEC12Q96PQ1 595 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 ATOH8Q96SQ7 321 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 ZNF426Q9BUY5 554 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 PLEKHA1Q9HB21 404 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 SLC40A1Q9NP59 571 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 CCDC59Q9P031 241 aaKnown RBP1.97□□□□□ -2.09
MCF2-204ENST00000414978 GALPQ9UBC7 116 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 CD84Q9UIB8 345 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 SLC25A15Q9Y619 301 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 A0A0B4J2E0 115 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 A0A1B0GX12 115 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 TLCD2A6NGC4 264 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 AGPAT2O15120 278 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 SULT1B1O43704 296 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 SOX15O60248 233 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 HBE1P02100 147 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 FABP3P05413 133 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 GDF1P27539 372 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 GNRHRP30968 328 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 CDKN2CP42773 168 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 PSMD8P48556 350 aa1.97□□□□□ -2.09
MCF2-204ENST00000414978 THBS3P49746 956 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms