RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 DHRS13Q6UX07 377 aa8.16□□□□□ -1.1
SNHG3-201ENST00000413987 LYG2Q86SG7 212 aa8.16□□□□□ -1.1
SNHG3-201ENST00000413987 TMEM229BQ8NBD8 167 aa8.16□□□□□ -1.1
SNHG3-201ENST00000413987 OR4A4PQ8NGN8 299 aa8.16□□□□□ -1.1
SNHG3-201ENST00000413987 PPP1R1CQ8WVI7 109 aa8.16□□□□□ -1.1
SNHG3-201ENST00000413987 HIST1H2BAQ96A08 127 aa8.16□□□□□ -1.1
SNHG3-201ENST00000413987 ANKRD9Q96BM1 317 aaPredicted RBP8.16□□□□□ -1.1
SNHG3-201ENST00000413987 ZBTB8AQ96BR9 441 aa8.16□□□□□ -1.1
SNHG3-201ENST00000413987 BPIFA2Q96DR5 249 aa8.16□□□□□ -1.1
SNHG3-201ENST00000413987 ZNF430Q9H8G1 570 aaPredicted RBP8.16□□□□□ -1.1
SNHG3-201ENST00000413987 SLC17A5Q9NRA2 495 aa8.16□□□□□ -1.1
SNHG3-201ENST00000413987 STEAP1Q9UHE8 339 aa8.16□□□□□ -1.1
SNHG3-201ENST00000413987 ZNF230Q9UIE0 474 aaPredicted RBP8.16□□□□□ -1.1
SNHG3-201ENST00000413987 ZNF107Q9UII5 783 aaPredicted RBP8.16□□□□□ -1.1
SNHG3-201ENST00000413987 KBTBD11-OT1A0A1B0GTJ5 212 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 M0R036 132 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 AP4M1O00189 453 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 OR2T1O43869 369 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 SCRG1O75711 98 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 CSN3P07498 182 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 TACSTD2P09758 323 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 CSNK2A2P19784 350 aaPredicted RBP8.15□□□□□ -1.1
SNHG3-201ENST00000413987 CAV2P51636 162 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 EIF5AP63241 154 aaKnown RBP8.15□□□□□ -1.1
SNHG3-201ENST00000413987 SRSF1Q07955 248 aaKnown RBP eCLIP8.15□□□□□ -1.13e-23■■□□□ 12.7
SNHG3-201ENST00000413987 EXOSC7Q15024 291 aaKnown RBP8.15□□□□□ -1.1
SNHG3-201ENST00000413987 Q499Y3 187 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 SLC35D3Q5M8T2 416 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 OR10K2Q6IF99 312 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 ZNF841Q6ZN19 808 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 TMPRSS12Q86WS5 348 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 CALHM1Q8IU99 346 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 OR2L13Q8N349 312 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 TSLPQ969D9 159 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 FAM210BQ96KR6 192 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 RHOFQ9HBH0 211 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 ACKR4Q9NPB9 350 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 CLN8Q9UBY8 286 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 NOP16Q9Y3C1 178 aaKnown RBP8.15□□□□□ -1.1
SNHG3-201ENST00000413987 ZNF780BQ9Y6R6 833 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 KNTC1P50748 2209 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 TEX13DA0A0J9YY54 714 aaPredicted RBP8.15□□□□□ -1.1
SNHG3-201ENST00000413987 SPAARA0A1B0GVQ0 90 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 A0A1W2PPE3 182 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 FRG2CA6NGY1 282 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 MFNGO00587 321 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 SYNGR3O43761 229 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 FARS2O95363 451 aaKnown RBP8.15□□□□□ -1.1
SNHG3-201ENST00000413987 WNT11O96014 354 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 CD3DP04234 171 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 GAPDHP04406 335 aaKnown RBP8.15□□□□□ -1.1
SNHG3-201ENST00000413987 CD14P08571 375 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 HCKP08631 526 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 CPMP14384 443 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 GPX4P36969 197 aaPredicted RBP8.15□□□□□ -1.1
SNHG3-201ENST00000413987 RAB38P57729 211 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 SRSF3P84103 164 aaKnown RBP8.15□□□□□ -1.1
SNHG3-201ENST00000413987 INSM1Q01101 510 aaPredicted RBP8.15□□□□□ -1.1
SNHG3-201ENST00000413987 FAM53BQ14153 422 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 AWAT2Q6E213 333 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 EIF5AL1Q6IS14 154 aaKnown RBP8.15□□□□□ -1.1
SNHG3-201ENST00000413987 LRRC25Q8N386 305 aaPredicted RBP8.15□□□□□ -1.1
SNHG3-201ENST00000413987 GALNT16Q8N428 558 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 FGFRL1Q8N441 504 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 DEFB124Q8NES8 71 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 C8orf44Q96CB5 159 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 ZMYND19Q96E35 227 aaPredicted RBP8.15□□□□□ -1.1
SNHG3-201ENST00000413987 JMJD8Q96S16 334 aa8.15□□□□□ -1.1
SNHG3-201ENST00000413987 AHCTF1Q8WYP5 2266 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 A0A1W2PNU3 283 aaPredicted RBP8.14□□□□□ -1.11
SNHG3-201ENST00000413987 BLOC1S5-TXNDC5H3BN57 136 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 CDC40O60508 579 aaKnown RBP eCLIP8.14□□□□□ -1.11
SNHG3-201ENST00000413987 PPP1R3DO95685 299 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 CD2P06729 351 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 CFPP27918 469 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 GLP1RP43220 463 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 HTR5AP47898 357 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 CYB561P49447 251 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 ZNF136P52737 540 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 AESQ08117 197 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 DHRS2Q13268 280 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 STPG1Q5TH74 334 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 UNQ6126/PRO20091Q6UXV3 157 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 ZNF836Q6ZNA1 936 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 ASCL5Q7RTU5 278 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 TMED4Q7Z7H5 227 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 ANGPTL5Q86XS5 388 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 OR4K17Q8NGC6 315 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 OR52L2PQ8NGH6 319 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 PFN4Q8NHR9 129 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 ZNF417Q8TAU3 575 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 MALSU1Q96EH3 234 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 PSMG3-AS1Q96PY0 264 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 CHRNA10Q9GZZ6 450 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 PPP4R1LQ9P1A2 415 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 IKZF2Q9UKS7 526 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 RARRES3Q9UL19 164 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 TRAV18A0A075B6X5 111 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 A0A1B0GX78 115 aa8.14□□□□□ -1.11
SNHG3-201ENST00000413987 TVP23AA6NH52 213 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms