RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 RAB5CP51148 216 aa12.89□□□□□ -0.35
TTC39A-208ENST00000413473 DUSP3P51452 185 aaPredicted RBP12.89□□□□□ -0.35
TTC39A-208ENST00000413473 RAB5BP61020 215 aa12.89□□□□□ -0.35
TTC39A-208ENST00000413473 TMEM182Q6ZP80 229 aaPredicted RBP12.89□□□□□ -0.35
TTC39A-208ENST00000413473 HIST1H2BAQ96A08 127 aa12.89□□□□□ -0.35
TTC39A-208ENST00000413473 BOD1Q96IK1 185 aa12.89□□□□□ -0.35
TTC39A-208ENST00000413473 GPHA2Q96T91 129 aa12.89□□□□□ -0.35
TTC39A-208ENST00000413473 TMEM222Q9H0R3 208 aa12.89□□□□□ -0.35
TTC39A-208ENST00000413473 TCFL5Q9UL49 500 aa12.89□□□□□ -0.35
TTC39A-208ENST00000413473 RFNGQ9Y644 331 aa12.89□□□□□ -0.35
TTC39A-208ENST00000413473 RPL36A-HNRNPH2H7BZ11 118 aa12.88□□□□□ -0.35
TTC39A-208ENST00000413473 CCL2P13500 99 aa12.88□□□□□ -0.35
TTC39A-208ENST00000413473 PMELP40967 661 aa12.88□□□□□ -0.35
TTC39A-208ENST00000413473 SNRPEP62304 92 aaKnown RBP12.88□□□□□ -0.35
TTC39A-208ENST00000413473 CLINT1Q14677 625 aa12.88□□□□□ -0.35
TTC39A-208ENST00000413473 TRIM61Q5EBN2 209 aa12.88□□□□□ -0.35
TTC39A-208ENST00000413473 DPPA2Q7Z7J5 298 aa12.88□□□□□ -0.35
TTC39A-208ENST00000413473 TBC1D26Q86UD7 250 aa12.88□□□□□ -0.35
TTC39A-208ENST00000413473 OR2C3Q8N628 320 aa12.88□□□□□ -0.35
TTC39A-208ENST00000413473 OR56B2PQ8NGI1 322 aa12.88□□□□□ -0.35
TTC39A-208ENST00000413473 CPNE4Q96A23 557 aaPredicted RBP12.88□□□□□ -0.35
TTC39A-208ENST00000413473 SLAMF9Q96A28 289 aa12.88□□□□□ -0.35
TTC39A-208ENST00000413473 ISOC2Q96AB3 205 aa12.88□□□□□ -0.35
TTC39A-208ENST00000413473 PAPOLGQ9BWT3 736 aaKnown RBP12.88□□□□□ -0.35
TTC39A-208ENST00000413473 PRDM14Q9GZV8 571 aa12.88□□□□□ -0.35
TTC39A-208ENST00000413473 STRAPQ9Y3F4 350 aaKnown RBP12.88□□□□□ -0.35
TTC39A-208ENST00000413473 FBXO7Q9Y3I1 522 aa12.88□□□□□ -0.35
TTC39A-208ENST00000413473 MUC3AQ02505 3323 aa12.88□□□□□ -0.35
TTC39A-208ENST00000413473 TNRC6BQ9UPQ9 1833 aaKnown RBP12.88□□□□□ -0.35
TTC39A-208ENST00000413473 A0A096LPE4 126 aa12.88□□□□□ -0.35
TTC39A-208ENST00000413473 A0A1W2PPZ6 126 aa12.88□□□□□ -0.35
TTC39A-208ENST00000413473 TRDCB7Z8K6 153 aa12.88□□□□□ -0.35
TTC39A-208ENST00000413473 ZNF44P15621 663 aa12.88□□□□□ -0.35
TTC39A-208ENST00000413473 PAX6P26367 422 aa12.88□□□□□ -0.35
TTC39A-208ENST00000413473 POLR2GP62487 172 aaKnown RBP eCLIP12.88□□□□□ -0.35
TTC39A-208ENST00000413473 TGIF1Q15583 401 aa12.88□□□□□ -0.35
TTC39A-208ENST00000413473 ZNF695Q8IW36 515 aa12.88□□□□□ -0.35
TTC39A-208ENST00000413473 FAM213BQ8TBF2 198 aa12.88□□□□□ -0.35
TTC39A-208ENST00000413473 CRIM1Q9NZV1 1036 aa12.88□□□□□ -0.35
TTC39A-208ENST00000413473 URB1O60287 2271 aaKnown RBP12.88□□□□□ -0.35
TTC39A-208ENST00000413473 WDFY4Q6ZS81 3184 aa12.87□□□□□ -0.35
TTC39A-208ENST00000413473 MRPL33O75394 65 aaKnown RBP12.87□□□□□ -0.35
TTC39A-208ENST00000413473 CDS2O95674 445 aa12.87□□□□□ -0.35
TTC39A-208ENST00000413473 IGHEP01854 428 aa12.87□□□□□ -0.35
TTC39A-208ENST00000413473 SCTP09683 121 aa12.87□□□□□ -0.35
TTC39A-208ENST00000413473 OMGP23515 440 aa12.87□□□□□ -0.35
TTC39A-208ENST00000413473 PTAFRP25105 342 aa12.87□□□□□ -0.35
TTC39A-208ENST00000413473 LMO1P25800 156 aa12.87□□□□□ -0.35
TTC39A-208ENST00000413473 NKX2-1P43699 371 aaPredicted RBP12.87□□□□□ -0.35
TTC39A-208ENST00000413473 HAAOP46952 286 aa12.87□□□□□ -0.35
TTC39A-208ENST00000413473 CYB561P49447 251 aa12.87□□□□□ -0.35
TTC39A-208ENST00000413473 COLCA1Q6ZS62 124 aa12.87□□□□□ -0.35
TTC39A-208ENST00000413473 MAGT1Q9H0U3 335 aa12.87□□□□□ -0.35
TTC39A-208ENST00000413473 NOSIPQ9Y314 301 aaKnown RBP12.87□□□□□ -0.35
TTC39A-208ENST00000413473 UMAD1C9J7I0 102 aa12.87□□□□□ -0.35
TTC39A-208ENST00000413473 TK1P04183 234 aa12.87□□□□□ -0.35
TTC39A-208ENST00000413473 PPP1CCP36873 323 aaKnown RBP12.87□□□□□ -0.35
TTC39A-208ENST00000413473 GFRA1P56159 465 aa12.87□□□□□ -0.35
TTC39A-208ENST00000413473 ARF1P84077 181 aaKnown RBP12.87□□□□□ -0.35
TTC39A-208ENST00000413473 SRYQ05066 204 aa12.87□□□□□ -0.35
TTC39A-208ENST00000413473 SPINK14Q6IE38 97 aa12.87□□□□□ -0.35
TTC39A-208ENST00000413473 ZNF818PQ6ZRF7 136 aa12.87□□□□□ -0.35
TTC39A-208ENST00000413473 Q8NFD4 153 aa12.87□□□□□ -0.35
TTC39A-208ENST00000413473 FGF23Q9GZV9 251 aaPredicted RBP12.87□□□□□ -0.35
TTC39A-208ENST00000413473 FAM86C1Q9NVL1 165 aa12.87□□□□□ -0.35
TTC39A-208ENST00000413473 KNTC1P50748 2209 aa12.87□□□□□ -0.35
TTC39A-208ENST00000413473 IGSF23A1L1A6 192 aa12.86□□□□□ -0.35
TTC39A-208ENST00000413473 C1orf196B1AJZ1 125 aa12.86□□□□□ -0.35
TTC39A-208ENST00000413473 IFNA4P05014 189 aa12.86□□□□□ -0.35
TTC39A-208ENST00000413473 HOXA6P31267 233 aa12.86□□□□□ -0.35
TTC39A-208ENST00000413473 MEOX2P50222 304 aa12.86□□□□□ -0.35
TTC39A-208ENST00000413473 GPM6AP51674 278 aa12.86□□□□□ -0.35
TTC39A-208ENST00000413473 SRPXP78539 464 aa12.86□□□□□ -0.35
TTC39A-208ENST00000413473 PRDX4Q13162 271 aa12.86□□□□□ -0.35
TTC39A-208ENST00000413473 CXorf66Q5JRM2 361 aaPredicted RBP12.86□□□□□ -0.35
TTC39A-208ENST00000413473 SELENOHQ8IZQ5 122 aaKnown RBP12.86□□□□□ -0.35
TTC39A-208ENST00000413473 FAM185AQ8N0U4 392 aa12.86□□□□□ -0.35
TTC39A-208ENST00000413473 GAPTQ8N292 157 aa12.86□□□□□ -0.35
TTC39A-208ENST00000413473 ZNF565Q8N9K5 539 aa12.86□□□□□ -0.35
TTC39A-208ENST00000413473 TMEM56Q96MV1 263 aa12.86□□□□□ -0.35
TTC39A-208ENST00000413473 REPIN1Q9BWE0 567 aaKnown RBP12.86□□□□□ -0.35
TTC39A-208ENST00000413473 C11orf1Q9H5F2 150 aa12.86□□□□□ -0.35
TTC39A-208ENST00000413473 Q9N2K0 584 aa12.86□□□□□ -0.35
TTC39A-208ENST00000413473 IL36RNQ9UBH0 155 aa12.86□□□□□ -0.35
TTC39A-208ENST00000413473 TMEM56-RWDD3S4R434 201 aa12.86□□□□□ -0.35
TTC39A-208ENST00000413473 K7N7A8 449 aa12.86□□□□□ -0.35
TTC39A-208ENST00000413473 HSPB6O14558 160 aa12.86□□□□□ -0.35
TTC39A-208ENST00000413473 HLA-HP01893 362 aa12.86□□□□□ -0.35
TTC39A-208ENST00000413473 WDR5BQ86VZ2 330 aa12.86□□□□□ -0.35
TTC39A-208ENST00000413473 CD300LFQ8TDQ1 290 aa12.86□□□□□ -0.35
TTC39A-208ENST00000413473 SLC35B3Q9H1N7 401 aa12.86□□□□□ -0.35
TTC39A-208ENST00000413473 KCNJ16Q9NPI9 418 aa12.86□□□□□ -0.35
TTC39A-208ENST00000413473 MT-ND4LP03901 98 aa12.85□□□□□ -0.35
TTC39A-208ENST00000413473 OR13C7P0DN81 318 aa12.85□□□□□ -0.35
TTC39A-208ENST00000413473 FOXO1Q12778 655 aa12.85□□□□□ -0.35
TTC39A-208ENST00000413473 KRBOX4Q5JUW0 171 aa12.85□□□□□ -0.35
TTC39A-208ENST00000413473 ABHD14AQ9BUJ0 271 aa12.85□□□□□ -0.35
TTC39A-208ENST00000413473 PBDC1Q9BVG4 233 aa12.85□□□□□ -0.35
TTC39A-208ENST00000413473 MRPS18CQ9Y3D5 142 aaKnown RBP12.85□□□□□ -0.35
TTC39A-208ENST00000413473 IGKV1D-13A0A0B4J2D9 117 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms