RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 C20orf196Q8IYI0 205 aa4.51□□□□□ -1.69
LINC00342-201ENST00000412393 SPAG16Q8N0X2 631 aa4.51□□□□□ -1.69
LINC00342-201ENST00000412393 ZNF525Q8N782 197 aa4.51□□□□□ -1.69
LINC00342-201ENST00000412393 ZFP41Q8N8Y5 198 aa4.51□□□□□ -1.69
LINC00342-201ENST00000412393 ZNF565Q8N9K5 539 aa4.51□□□□□ -1.69
LINC00342-201ENST00000412393 SLC30A7Q8NEW0 376 aa4.51□□□□□ -1.69
LINC00342-201ENST00000412393 BPIFCQ8NFQ6 507 aa4.51□□□□□ -1.69
LINC00342-201ENST00000412393 OR10K1Q8NGX5 313 aa4.51□□□□□ -1.69
LINC00342-201ENST00000412393 COQ8AQ8NI60 647 aa4.51□□□□□ -1.69
LINC00342-201ENST00000412393 RNASE11Q8TAA1 199 aaKnown RBP4.51□□□□□ -1.69
LINC00342-201ENST00000412393 SFT2D1Q8WV19 159 aa4.51□□□□□ -1.69
LINC00342-201ENST00000412393 PTX4Q96A99 478 aa4.51□□□□□ -1.69
LINC00342-201ENST00000412393 SLC25A38Q96DW6 304 aa4.51□□□□□ -1.69
LINC00342-201ENST00000412393 MALSU1Q96EH3 234 aa4.51□□□□□ -1.69
LINC00342-201ENST00000412393 NARS2Q96I59 477 aaKnown RBP4.51□□□□□ -1.69
LINC00342-201ENST00000412393 ULBP2Q9BZM5 246 aa4.51□□□□□ -1.69
LINC00342-201ENST00000412393 MS4A7Q9GZW8 240 aaPredicted RBP4.51□□□□□ -1.69
LINC00342-201ENST00000412393 ARL6Q9H0F7 186 aa4.51□□□□□ -1.69
LINC00342-201ENST00000412393 ZFP57Q9NU63 452 aa4.51□□□□□ -1.69
LINC00342-201ENST00000412393 SLC2A8Q9NY64 477 aa4.51□□□□□ -1.69
LINC00342-201ENST00000412393 TAS2R3Q9NYW6 316 aa4.51□□□□□ -1.69
LINC00342-201ENST00000412393 METTL1Q9UBP6 276 aaKnown RBP4.51□□□□□ -1.69
LINC00342-201ENST00000412393 SLC7A7Q9UM01 511 aa4.51□□□□□ -1.69
LINC00342-201ENST00000412393 SIGLEC7Q9Y286 467 aa4.51□□□□□ -1.69
LINC00342-201ENST00000412393 V9GY05 133 aa4.51□□□□□ -1.69
LINC00342-201ENST00000412393 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.5□□□□□ -1.69
LINC00342-201ENST00000412393 TRBV5-7A0A0A0MS05 114 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 IGHV2OR16-5A0A0B4J2B6 119 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 TRBV5-5A0A0J9YX44 114 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 A0A1B0GWJ7 208 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 SMIM30A4D0T7 59 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 COLCA2A8K830 154 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 B9A039 149 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 PSMD9O00233 223 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 ARPC1BO15143 372 aaKnown RBP4.5□□□□□ -1.69
LINC00342-201ENST00000412393 PIN1P1O15428 100 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 BCL2L11O43521 198 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 CRLF1O75462 422 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 CLN5O75503 358 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 CRTAPO75718 401 aaPredicted RBP4.5□□□□□ -1.69
LINC00342-201ENST00000412393 HLA-HP01893 362 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 OR4A8P0C604 315 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 SLC2A1P11166 492 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 LYL1P12980 280 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 APEHP13798 732 aaKnown RBP4.5□□□□□ -1.69
LINC00342-201ENST00000412393 B4GALT1P15291 398 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 SLC25A16P16260 332 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 THBS4P35443 961 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 SLC6A9P48067 706 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 AKR1D1P51857 326 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 CAPZA1P52907 286 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 HCCSP53701 268 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 UCP2P55851 309 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 BIDP55957 195 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 ZP4Q12836 540 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 MELKQ14680 651 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 HMGN3Q15651 99 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 EFNB3Q15768 340 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 ADIPOQQ15848 244 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 MST1LQ2TV78 715 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 LBHQ53QV2 105 aaPredicted RBP4.5□□□□□ -1.69
LINC00342-201ENST00000412393 LY6G6FQ5SQ64 297 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 AVPI1Q5T686 147 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 GLT8D1Q68CQ7 371 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 FAM166AQ6J272 317 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 PLBD1Q6P4A8 553 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 ARL9Q6T311 187 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 ZNF788Q6ZQV5 615 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 C17orf107Q6ZR85 190 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 SLC35D2Q76EJ3 337 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 ZNF546Q86UE3 836 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 MDP1Q86V88 176 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 MYPOPQ86VE0 399 aaPredicted RBP4.5□□□□□ -1.69
LINC00342-201ENST00000412393 SERPINA12Q8IW75 414 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 WDFY1Q8IWB7 410 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 NRMQ8IXM6 262 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 CDK20Q8IZL9 346 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 PUSL1Q8N0Z8 303 aaKnown RBP4.5□□□□□ -1.69
LINC00342-201ENST00000412393 MUC20Q8N307 709 aaPredicted RBP4.5□□□□□ -1.69
LINC00342-201ENST00000412393 C15orf54Q8N8G6 183 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 TMEM229BQ8NBD8 167 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 NUP37Q8NFH4 326 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 BBS1Q8NFJ9 593 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 OR52L1Q8NGH7 329 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 OR51G2Q8NGK0 314 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 OR6X1Q8NH79 312 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 LYPD6BQ8NI32 183 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 GPR148Q8TDV2 347 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 C10orf105Q8TEF2 133 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 LIPHQ8WWY8 451 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 TMEM54Q969K7 222 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 PELI1Q96FA3 418 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 SAMD8Q96LT4 415 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 GFI1Q99684 422 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 VRK1Q99986 396 aaPredicted RBP4.5□□□□□ -1.69
LINC00342-201ENST00000412393 NMNAT2Q9BZQ4 307 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 OR52D1Q9H346 318 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 SAV1Q9H4B6 383 aaPredicted RBP4.5□□□□□ -1.69
LINC00342-201ENST00000412393 RERGLQ9H628 205 aa4.5□□□□□ -1.69
LINC00342-201ENST00000412393 ZNF442Q9H7R0 627 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms