RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 RBM12B-AS1Q9P1G2 102 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 NUFIP1Q9UHK0 495 aaKnown RBP3.19□□□□□ -1.9
BRCA1-204ENST00000412061 PSG11Q9UQ72 335 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 KLF13Q9Y2Y9 288 aaPredicted RBP3.19□□□□□ -1.9
BRCA1-204ENST00000412061 A0A1W2PP64 1363 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 SIGLEC1Q9BZZ2 1709 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 TSPOAP1O95153 1857 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 DNMT1P26358 1616 aaKnown RBP3.19□□□□□ -1.9
BRCA1-204ENST00000412061 PCF11O94913 1555 aaKnown RBP3.19□□□□□ -1.9
BRCA1-204ENST00000412061 CLUHO75153 1309 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 IGKV6D-21A0A0A0MT36 114 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 TRAV8-3A0A0A6YYJ7 113 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 IGKV3D-20A0A0C4DH25 116 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 KLF18A0A0U1RQI7 1052 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 EPOPA6NHQ4 379 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 CLDN24A6NM45 220 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 EVPLLA8MZ36 301 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 H3BQV1 296 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 FFAR1O14842 300 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 EPPINO95925 133 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 CA2P00918 260 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 MT-ND4P03905 459 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 IL6P05231 212 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 LINC00614P0C842 121 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 UCHL3P15374 230 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 CXCL3P19876 107 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 ALOX5APP20292 161 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 ME2P23368 584 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 AGTR1P30556 359 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 MAGEA12P43365 314 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 ZNF136P52737 540 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 SLC35A2P78381 396 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 GTF2BQ00403 316 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 CDK5Q00535 292 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 SKP2Q13309 424 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 C1DQ13901 141 aaKnown RBP3.19□□□□□ -1.9
BRCA1-204ENST00000412061 IRF4Q15306 451 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 RSU1Q15404 277 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 ZNF404Q494X3 552 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 RSBN1Q5VWQ0 802 aaPredicted RBP3.19□□□□□ -1.9
BRCA1-204ENST00000412061 OR10K2Q6IF99 312 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 TMEM205Q6UW68 189 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 PRNTQ86SH4 94 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 SLC51BQ86UW2 128 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 NIT1Q86X76 327 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 TGIF2LYQ8IUE0 185 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 OR6V1Q8N148 313 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 CLDN22Q8N7P3 220 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 SUMF2Q8NBJ7 301 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 TMEM161BQ8NDZ6 487 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 OR4M2Q8NGB6 313 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 OR4M1Q8NGD0 313 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 OR1P1Q8NH06 330 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 TYMSOSQ8TAI1 123 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 EEF1AKMT1Q8WVE0 214 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 RDH5Q92781 318 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 FAM104AQ969W3 186 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 RNF157Q96PX1 679 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 PRRT1Q99946 306 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 PYGO2Q9BRQ0 406 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 HDHD3Q9BSH5 251 aaPredicted RBP3.19□□□□□ -1.9
BRCA1-204ENST00000412061 PARP11Q9NR21 331 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 GID8Q9NWU2 228 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 GLTPQ9NZD2 209 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 POLR1DQ9Y2S0 133 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 LSM5Q9Y4Y9 91 aaKnown RBP3.19□□□□□ -1.9
BRCA1-204ENST00000412061 ARL5AQ9Y689 179 aa3.19□□□□□ -1.9
BRCA1-204ENST00000412061 PIKFYVEQ9Y2I7 2098 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 PTPRKQ15262 1439 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 A0A0U1RQV1 116 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 MYBPHLA2RUH7 354 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 BTNL10A8MVZ5 291 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 INS-IGF2F8WCM5 200 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 PSMD12O00232 456 aaPredicted RBP3.18□□□□□ -1.9
BRCA1-204ENST00000412061 UPK1AO00322 258 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 LAD1O00515 517 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 ARL6IP5O75915 188 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 INSP01308 110 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 CXCL2P19875 107 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 PRTN3P24158 256 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 MIPP30301 263 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 CTRLP40313 264 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 LYZP61626 148 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 MEF2CQ06413 473 aaPredicted RBP3.18□□□□□ -1.9
BRCA1-204ENST00000412061 MAPK14Q16539 360 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 HIST3H3Q16695 136 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 UBE2NLQ5JXB2 153 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 SPATA31B1PQ5VZV4 182 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 FBXL22Q6P050 247 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 IL34Q6ZMJ4 242 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 NAA40Q86UY6 237 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 LYG1Q8N1E2 194 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 OR2M7Q8NG81 312 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 OR51D1Q8NGF3 324 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 OR10D3Q8NH80 312 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 MFSD8Q8NHS3 518 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 SPPL2BQ8TCT7 592 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 NEK7Q8TDX7 302 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 TAMM41Q96BW9 452 aa3.18□□□□□ -1.9
BRCA1-204ENST00000412061 PHB2Q99623 299 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 605.3 ms