RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 PRNTQ86SH4 94 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 GID4Q8IVV7 300 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 CD177Q8N6Q3 437 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 DCAF4L2Q8NA75 395 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 C15orf40Q8WUR7 153 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 ORAOV1Q8WV07 137 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 AP3S1Q92572 193 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 SLC35E1Q96K37 410 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 ZIM3Q96PE6 472 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 RNF157Q96PX1 679 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 OR2A7Q96R45 310 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 PRSS27Q9BQR3 290 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 HDHD3Q9BSH5 251 aaPredicted RBP3.44□□□□□ -1.86
LSM5-205ENST00000409952 TIPINQ9BVW5 301 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 EBPLQ9BY08 206 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 PLEKHF2Q9H8W4 249 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 XPNPEP1Q9NQW7 623 aa3.44□□□□□ -1.86
LSM5-205ENST00000409952 DAZ3Q9NR90 486 aaKnown RBP3.44□□□□□ -1.86
LSM5-205ENST00000409952 CACNA1FO60840 1977 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 BAZ1AQ9NRL2 1556 aaPredicted RBP3.43□□□□□ -1.86
LSM5-205ENST00000409952 RAI1Q7Z5J4 1906 aaPredicted RBP3.43□□□□□ -1.86
LSM5-205ENST00000409952 IGHV1OR15-9A0A0B4J2B8 117 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 IGHV5-51A0A0C4DH38 117 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 A0A0G2JMP0 313 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 CENPVL3A0A0U1RRI6 287 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 A0A0X1KG70 313 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 KLLNB2CW77 178 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 TMEM238C9JI98 176 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 PGRMC1O00264 195 aaKnown RBP3.43□□□□□ -1.86
LSM5-205ENST00000409952 GYG2O15488 501 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 SLC37A4O43826 429 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 ARL6IP5O75915 188 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 IGLV2-8P01709 118 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 FABP1P07148 127 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 MIPP30301 263 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 NUDT1P36639 197 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 HSPA13P48723 471 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 PPP1CAP62136 330 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 MEF2CQ06413 473 aaPredicted RBP3.43□□□□□ -1.86
LSM5-205ENST00000409952 C1DQ13901 141 aaKnown RBP3.43□□□□□ -1.86
LSM5-205ENST00000409952 PAFAH1B3Q15102 231 aaKnown RBP3.43□□□□□ -1.86
LSM5-205ENST00000409952 C14orf177Q52M58 125 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 UBE2NLQ5JXB2 153 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 C1orf195Q5TG92 126 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 ZNF530Q6P9A1 599 aaPredicted RBP3.43□□□□□ -1.86
LSM5-205ENST00000409952 FAM131AQ6UXB0 335 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 UBALD2Q8IYN6 164 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 SLC25A45Q8N413 288 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 ZNF645Q8N7E2 425 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 OR1P1Q8NH06 330 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 OR10D3Q8NH80 312 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 OR1L1Q8NH94 360 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 ASB17Q8WXJ9 295 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 RDH5Q92781 318 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 TSGA10Q9BZW7 698 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 TLNRD1Q9H1K6 362 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 OR52D1Q9H346 318 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 NOX3Q9HBY0 568 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 PARVAQ9NVD7 372 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 FKBP14Q9NWM8 211 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 PAQR5Q9NXK6 330 aaPredicted RBP3.43□□□□□ -1.86
LSM5-205ENST00000409952 TAS2R5Q9NYW4 299 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 VPS29Q9UBQ0 182 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 POLR1DQ9Y2S0 133 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 LSM5Q9Y4Y9 91 aaKnown RBP3.43□□□□□ -1.86
LSM5-205ENST00000409952 V9GYQ6 96 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 CLUHO75153 1309 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 PCNX3Q9H6A9 2034 aa3.43□□□□□ -1.86
LSM5-205ENST00000409952 CHD4Q14839 1912 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 TGIF2-C20orf24A0A0A6YYL0 155 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 TEX50A0A1B0GTY4 177 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 CLDN24A6NM45 220 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 BTNL10A8MVZ5 291 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 CA11O75493 328 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 CYB5R3P00387 301 aaPredicted RBP3.42□□□□□ -1.86
LSM5-205ENST00000409952 IL3P08700 152 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 OR4E1P0C645 316 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 GABRA1P14867 456 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 ME2P23368 584 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 ELK4P28324 431 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 CCR7P32248 378 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 MAGEA12P43365 314 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 H2BFSP57053 126 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 IGLV3-21P80748 117 aaPredicted RBP3.42□□□□□ -1.86
LSM5-205ENST00000409952 IL17AQ16552 155 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 GLYATQ6IB77 296 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 ZNF544Q6NX49 715 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 GUSBP11Q6P575 273 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 OLIG3Q7RTU3 272 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 LRRC25Q8N386 305 aaPredicted RBP3.42□□□□□ -1.86
LSM5-205ENST00000409952 CLDN22Q8N7P3 220 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 ZIC4Q8N9L1 334 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 TMEM158Q8WZ71 300 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 EXOSC8Q96B26 276 aaKnown RBP3.42□□□□□ -1.86
LSM5-205ENST00000409952 TAMM41Q96BW9 452 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 FXYD5Q96DB9 178 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 CEP19Q96LK0 163 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 LINC01587Q99440 93 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 PRRT1Q99946 306 aa3.42□□□□□ -1.86
LSM5-205ENST00000409952 RTBDNQ9BSG5 229 aaPredicted RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms