RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 AK3Q9UIJ7 227 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 FZR1Q9UM11 496 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 NCOR2Q9Y618 2525 aa4.68□□□□□ -1.66
EPHA4-202ENST00000409854 RAI1Q7Z5J4 1906 aaPredicted RBP4.68□□□□□ -1.66
EPHA4-202ENST00000409854 PRAF2O60831 178 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 S100A8P05109 93 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 BSPH1Q075Z2 132 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 TFF3Q07654 80 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 ARFRP1Q13795 201 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 ZNF146Q15072 292 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 SRSF7Q16629 238 aaKnown RBP eCLIP4.67□□□□□ -1.66
EPHA4-202ENST00000409854 NCMAPQ5T1S8 102 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 OR52W1Q6IF63 320 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 ZNF782Q6ZMW2 699 aaPredicted RBP4.67□□□□□ -1.66
EPHA4-202ENST00000409854 WFDC8Q8IUA0 241 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 OR51S1Q8NGJ8 323 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 SLC6A7Q99884 636 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 FAAP24Q9BTP7 215 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 MRPL37Q9BZE1 423 aaKnown RBP4.67□□□□□ -1.66
EPHA4-202ENST00000409854 MCUBQ9NWR8 336 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 COQ3Q9NZJ6 369 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 IL36RNQ9UBH0 155 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 TRAV20A0A0B4J274 112 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 A0A1B0GUH1 482 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 TUBAL3A6NHL2 446 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 F5H5P2 479 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 M0QYG6 137 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 FABP1P07148 127 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 FCGR3AP08637 254 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 HRH1P35367 487 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 CDSNQ15517 529 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 MICBQ29980 383 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 RNASE10Q5GAN6 216 aaKnown RBP4.67□□□□□ -1.66
EPHA4-202ENST00000409854 TOR2AQ5JU69 321 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 SPIN3Q5JUX0 258 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 NKAPLQ5M9Q1 402 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 Q6P435 159 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 Q6ZPA2 131 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 Q6ZS49 121 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 DMRTC2Q8IXT2 367 aaPredicted RBP4.67□□□□□ -1.66
EPHA4-202ENST00000409854 MRGPRFQ96AM1 343 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 ZNF488Q96MN9 340 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 SLC25A21Q9BQT8 299 aaPredicted RBP4.67□□□□□ -1.66
EPHA4-202ENST00000409854 SEC22CQ9BRL7 303 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 TCEAL7Q9BRU2 100 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 SPACA1Q9HBV2 294 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 MSL2Q9HCI7 577 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 MYOZ1Q9NP98 299 aaPredicted RBP4.67□□□□□ -1.66
EPHA4-202ENST00000409854 NGBQ9NPG2 151 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 FAM221AA4D161 298 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 NKX2-6A6NCS4 301 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 POM121CA8CG34 1229 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 CEACAM18A8MTB9 384 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 SHISA9B4DS77 424 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 DISC1C4P0D8 188 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 CDIPTO14735 213 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 ATXN7O15265 892 aaPredicted RBP4.67□□□□□ -1.66
EPHA4-202ENST00000409854 NAPSAO96009 420 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 AMY2AP04746 511 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 IL5P05113 134 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 ADH4P08319 380 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 CFHR2P36980 270 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 GATA4P43694 442 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 WDR82Q6UXN9 313 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 BPIFB2Q8N4F0 458 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 ARRDC1Q8N5I2 433 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 BEST4Q8NFU0 473 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 OR13C8Q8NGS7 320 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 OR4K15Q8NH41 348 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 PRRT1Q99946 306 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 HDHD3Q9BSH5 251 aaPredicted RBP4.67□□□□□ -1.66
EPHA4-202ENST00000409854 ALX4Q9H161 411 aaPredicted RBP4.67□□□□□ -1.66
EPHA4-202ENST00000409854 SEBOXQ9HB31 216 aaPredicted RBP4.67□□□□□ -1.66
EPHA4-202ENST00000409854 CA10Q9NS85 328 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 COA4Q9NYJ1 87 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 FLVCR2Q9UPI3 526 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 SESN1Q9Y6P5 492 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 NBEAQ8NFP9 2946 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 POLEQ07864 2286 aa4.67□□□□□ -1.66
EPHA4-202ENST00000409854 TRBV6-6A0A0A6YYG2 114 aa4.66□□□□□ -1.66
EPHA4-202ENST00000409854 FAM90A27PA6NNH2 459 aa4.66□□□□□ -1.66
EPHA4-202ENST00000409854 ARPC1BO15143 372 aaKnown RBP4.66□□□□□ -1.66
EPHA4-202ENST00000409854 OR7C1O76099 320 aaPredicted RBP4.66□□□□□ -1.66
EPHA4-202ENST00000409854 SNU13P55769 128 aaKnown RBP4.66□□□□□ -1.66
EPHA4-202ENST00000409854 TAS2R46P59540 309 aa4.66□□□□□ -1.66
EPHA4-202ENST00000409854 ZFP69Q49AA0 526 aa4.66□□□□□ -1.66
EPHA4-202ENST00000409854 C4orf17Q53FE4 359 aa4.66□□□□□ -1.66
EPHA4-202ENST00000409854 GLDNQ6ZMI3 551 aaPredicted RBP4.66□□□□□ -1.66
EPHA4-202ENST00000409854 SLC36A1Q7Z2H8 476 aa4.66□□□□□ -1.66
EPHA4-202ENST00000409854 LHFPL1Q86WI0 220 aa4.66□□□□□ -1.66
EPHA4-202ENST00000409854 BATF2Q8N1L9 274 aa4.66□□□□□ -1.66
EPHA4-202ENST00000409854 OR5AP2Q8NGF4 316 aa4.66□□□□□ -1.66
EPHA4-202ENST00000409854 RNASE11Q8TAA1 199 aaKnown RBP4.66□□□□□ -1.66
EPHA4-202ENST00000409854 CMSS1Q9BQ75 279 aaKnown RBP4.66□□□□□ -1.66
EPHA4-202ENST00000409854 SYT3Q9BQG1 590 aa4.66□□□□□ -1.66
EPHA4-202ENST00000409854 GINS4Q9BRT9 223 aa4.66□□□□□ -1.66
EPHA4-202ENST00000409854 ERRFI1Q9UJM3 462 aaPredicted RBP4.66□□□□□ -1.66
EPHA4-202ENST00000409854 SCP2D1Q9UJQ7 156 aa4.66□□□□□ -1.66
EPHA4-202ENST00000409854 DYSFO75923 2080 aa4.66□□□□□ -1.66
EPHA4-202ENST00000409854 IGKV1D-8A0A087WSZ0 117 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms