RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 TMEM200BQ69YZ2 307 aa8.96□□□□□ -0.98
CHMP3-205ENST00000409810 Q6P435 159 aa8.96□□□□□ -0.98
CHMP3-205ENST00000409810 GLIPR1L1Q6UWM5 242 aa8.96□□□□□ -0.98
CHMP3-205ENST00000409810 BRD3OSQ6XYD6 125 aa8.96□□□□□ -0.98
CHMP3-205ENST00000409810 TRAPPC6BQ86SZ2 158 aa8.96□□□□□ -0.98
CHMP3-205ENST00000409810 SPARTQ8N0X7 666 aa8.96□□□□□ -0.98
CHMP3-205ENST00000409810 OR4S1Q8NGB4 309 aa8.96□□□□□ -0.98
CHMP3-205ENST00000409810 ZFAND2BQ8WV99 257 aa8.96□□□□□ -0.98
CHMP3-205ENST00000409810 ZDHHC16Q969W1 377 aa8.96□□□□□ -0.98
CHMP3-205ENST00000409810 MRPS24Q96EL2 167 aaKnown RBP8.96□□□□□ -0.98
CHMP3-205ENST00000409810 ZNF714Q96N38 554 aa8.96□□□□□ -0.98
CHMP3-205ENST00000409810 NKX3-1Q99801 234 aaPredicted RBP8.96□□□□□ -0.98
CHMP3-205ENST00000409810 CST11Q9H112 138 aa8.96□□□□□ -0.98
CHMP3-205ENST00000409810 PPA2Q9H2U2 334 aa8.96□□□□□ -0.98
CHMP3-205ENST00000409810 ZMAT3Q9HA38 289 aaKnown RBP8.96□□□□□ -0.98
CHMP3-205ENST00000409810 NDUFB11Q9NX14 153 aa8.96□□□□□ -0.98
CHMP3-205ENST00000409810 GHRLQ9UBU3 117 aa8.96□□□□□ -0.98
CHMP3-205ENST00000409810 ST3GAL6Q9Y274 331 aa8.96□□□□□ -0.98
CHMP3-205ENST00000409810 LINC00312Q9Y6C7 94 aa8.96□□□□□ -0.98
CHMP3-205ENST00000409810 A0A0G2JK05 382 aa8.95□□□□□ -0.98
CHMP3-205ENST00000409810 H3BUI4 141 aa8.95□□□□□ -0.98
CHMP3-205ENST00000409810 OR7C1O76099 320 aaPredicted RBP8.95□□□□□ -0.98
CHMP3-205ENST00000409810 RBP4P02753 201 aa8.95□□□□□ -0.98
CHMP3-205ENST00000409810 UBBP0CG47 229 aa8.95□□□□□ -0.98
CHMP3-205ENST00000409810 ZNF728P0DKX0 622 aa8.95□□□□□ -0.98
CHMP3-205ENST00000409810 GALP22466 123 aa8.95□□□□□ -0.98
CHMP3-205ENST00000409810 PSMB9P28065 219 aa8.95□□□□□ -0.98
CHMP3-205ENST00000409810 P2RX3P56373 397 aa8.95□□□□□ -0.98
CHMP3-205ENST00000409810 RBM11P57052 281 aaKnown RBP8.95□□□□□ -0.98
CHMP3-205ENST00000409810 ZNF273Q14593 569 aa8.95□□□□□ -0.98
CHMP3-205ENST00000409810 PIGYQ3MUY2 71 aa8.95□□□□□ -0.98
CHMP3-205ENST00000409810 PAN3Q58A45 887 aaKnown RBP8.95□□□□□ -0.98
CHMP3-205ENST00000409810 KRBOX4Q5JUW0 171 aa8.95□□□□□ -0.98
CHMP3-205ENST00000409810 FAM27D1Q5T7N8 215 aa8.95□□□□□ -0.98
CHMP3-205ENST00000409810 RUSC1-AS1Q66K80 236 aa8.95□□□□□ -0.98
CHMP3-205ENST00000409810 Q8N7P7 452 aa8.95□□□□□ -0.98
CHMP3-205ENST00000409810 SIGLECL1Q8N7X8 197 aa8.95□□□□□ -0.98
CHMP3-205ENST00000409810 GAL3ST2Q9H3Q3 398 aa8.95□□□□□ -0.98
CHMP3-205ENST00000409810 IFT22Q9H7X7 185 aa8.95□□□□□ -0.98
CHMP3-205ENST00000409810 HEXA-AS1Q9H8Q6 139 aa8.95□□□□□ -0.98
CHMP3-205ENST00000409810 UBE2J1Q9Y385 318 aaPredicted RBP8.95□□□□□ -0.98
CHMP3-205ENST00000409810 SF3B6Q9Y3B4 125 aaKnown RBP8.95□□□□□ -0.98
CHMP3-205ENST00000409810 TRGV10A0A0A0MS01 117 aa8.94□□□□□ -0.98
CHMP3-205ENST00000409810 RNF212BA8MTL3 300 aa8.94□□□□□ -0.98
CHMP3-205ENST00000409810 C17orf98A8MV24 154 aa8.94□□□□□ -0.98
CHMP3-205ENST00000409810 HSPB6O14558 160 aa8.94□□□□□ -0.98
CHMP3-205ENST00000409810 TNFAIP8O95379 198 aa8.94□□□□□ -0.98
CHMP3-205ENST00000409810 CCL3L1P16619 93 aa8.94□□□□□ -0.98
CHMP3-205ENST00000409810 MYL9P24844 172 aa8.94□□□□□ -0.98
CHMP3-205ENST00000409810 CALRP27797 417 aaKnown RBP8.94□□□□□ -0.98
CHMP3-205ENST00000409810 PSMD7P51665 324 aa8.94□□□□□ -0.98
CHMP3-205ENST00000409810 UBE2E1P51965 193 aa8.94□□□□□ -0.98
CHMP3-205ENST00000409810 FABP5Q01469 135 aa8.94□□□□□ -0.98
CHMP3-205ENST00000409810 BAMBIQ13145 260 aa8.94□□□□□ -0.98
CHMP3-205ENST00000409810 ATXN7L3Q14CW9 347 aaPredicted RBP8.94□□□□□ -0.98
CHMP3-205ENST00000409810 SSX1Q16384 188 aa8.94□□□□□ -0.98
CHMP3-205ENST00000409810 TUSC1Q2TAM9 212 aa8.94□□□□□ -0.98
CHMP3-205ENST00000409810 TMEM91Q6ZNR0 172 aa8.94□□□□□ -0.98
CHMP3-205ENST00000409810 LRRTM1Q86UE6 522 aa8.94□□□□□ -0.98
CHMP3-205ENST00000409810 PDZD9Q8IXQ8 264 aa8.94□□□□□ -0.98
CHMP3-205ENST00000409810 BCL6BQ8N143 479 aaPredicted RBP8.94□□□□□ -0.98
CHMP3-205ENST00000409810 OR4D6Q8NGJ1 314 aa8.94□□□□□ -0.98
CHMP3-205ENST00000409810 TNFRSF14Q92956 283 aa8.94□□□□□ -0.98
CHMP3-205ENST00000409810 BARHL1Q9BZE3 327 aa8.94□□□□□ -0.98
CHMP3-205ENST00000409810 SPACA1Q9HBV2 294 aa8.94□□□□□ -0.98
CHMP3-205ENST00000409810 VCX3AQ9NNX9 186 aa8.94□□□□□ -0.98
CHMP3-205ENST00000409810 OR6C3Q9NZP0 311 aa8.94□□□□□ -0.98
CHMP3-205ENST00000409810 FAM96BQ9Y3D0 163 aa8.94□□□□□ -0.98
CHMP3-205ENST00000409810 TRAV24A0A0B4J272 114 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 TRDV1A0A1B0GX56 115 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 FAM90A10PA6NDY2 464 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 FAM90A18PA6NE21 464 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 FAM90A16PA6NEW6 464 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 FAM90A20PA6NIJ5 464 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 FAM90A8PA6NJQ4 464 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 FAM90A7PA6NKC0 464 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 FAM90A22PA8MWA6 464 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 FAM90A12PA8MX19 464 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 FAM90A5PA8MXJ8 464 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 FAM90A23PA8MXZ1 464 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 RNASEK-C17orf49H0YIS7 233 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 PDCD5O14737 125 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 GEMIN2O14893 280 aaKnown RBP8.93□□□□□ -0.98
CHMP3-205ENST00000409810 NPFFO15130 113 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 CRTAPO75718 401 aaPredicted RBP8.93□□□□□ -0.98
CHMP3-205ENST00000409810 CLPXO76031 633 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 VENTXO95231 258 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 PAHP00439 452 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 FBP1P09467 338 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 FAM90A15PP0C7V4 464 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 FAM90A13PP0C7W8 464 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 FAM90A14PP0C7W9 464 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 FAM90A24PP0C7X0 464 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 MGMTP16455 207 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 HTR2CP28335 458 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 AESQ08117 197 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 KLRD1Q13241 179 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 TAF9Q16594 264 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 DEFB112Q30KQ8 113 aa8.93□□□□□ -0.98
CHMP3-205ENST00000409810 ATAD3CQ5T2N8 411 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms