RNA–Protein interactions for RNA: ENST00000409809.5

COL6A3-206, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 8,916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-206ENST00000409809 CYB561D1Q8N8Q1 229 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 RARRES2Q99969 163 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 B4E171 279 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 RAB29O14966 203 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 DPTQ07507 201 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 HIST1H4GQ99525 98 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 VN1R1Q9GZP7 353 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 CDC14BO60729 498 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 CD300CQ08708 224 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 DMRTA1Q5VZB9 504 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 MORN4Q8NDC4 146 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 AQP10Q96PS8 301 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 ZPBPQ9BS86 351 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 CISD1Q9NZ45 108 aaKnown RBP11.5□□□□□ -0.57
COL6A3-206ENST00000409809 ADAMTSL3P82987 1691 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 KLRC4-KLRK1H3BQV0 150 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 SRSF10O75494 262 aaKnown RBP11.5□□□□□ -0.57
COL6A3-206ENST00000409809 SLC35E4Q6ICL7 350 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 C5orf17Q8NAS9 161 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 WBP2Q969T9 261 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 LANCL2Q9NS86 450 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 SLCO1C1Q9NYB5 712 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 STARD10Q9Y365 291 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 PI3P19957 117 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 OR10AD1Q8NGE0 317 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 TMEM230Q96A57 120 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 MOB3AQ96BX8 217 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 C19orf24Q9BVV8 132 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 CLN8Q9UBY8 286 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 KCNE5Q9UJ90 142 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 ZNF346Q9UL40 294 aaKnown RBP11.5□□□□□ -0.57
COL6A3-206ENST00000409809 MYOFQ9NZM1 2061 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 FAM26DQ5JW98 314 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 TEX29Q8N6K0 151 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 NCOR1O75376 2440 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 PI4KAP42356 2102 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 TCRBV5S1A1TA0A578 114 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 TMEM215Q68D42 235 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 SIGMAR1Q99720 223 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 SLC52A3Q9NQ40 469 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 DAPP1Q9UN19 280 aa11.5□□□□□ -0.57
COL6A3-206ENST00000409809 NRAPQ86VF7 1730 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 TMEM250H0YL14 139 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 GPR3P46089 330 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 SCD5Q86SK9 330 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 HHIPQ96QV1 700 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 B9D1Q9UPM9 204 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 A0A0B4J2E0 115 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 A0A1B0GX12 115 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 PAPPA-AS1Q5QFB9 102 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 OR8A1Q8NGG7 326 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 RPS20P60866 119 aaKnown RBP11.49□□□□□ -0.57
COL6A3-206ENST00000409809 RHOVQ96L33 236 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 TOX2Q96NM4 488 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 ZBP1Q9H171 429 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 LPAR5Q9H1C0 372 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 TMEM30AQ9NV96 361 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 LRP12Q9Y561 859 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 LOC107984156A0A0G2JMH3 177 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 TNFSF11O14788 317 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 DNAL4O96015 105 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 MUC1P15941 1255 aaPredicted RBP11.49□□□□□ -0.57
COL6A3-206ENST00000409809 Q6ZSR6 202 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 ARL17AQ8IVW1 177 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 PATJQ8NI35 1801 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 A0A1B0GX78 115 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 FAM221AA4D161 298 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 DHRS7CA6NNS2 312 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 HCRTO43612 131 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 C1SP09871 688 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 KISS1Q15726 138 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 CALHM1Q8IU99 346 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 TGIF2LYQ8IUE0 185 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 TP53I13Q8NBR0 393 aaPredicted RBP11.49□□□□□ -0.57
COL6A3-206ENST00000409809 HS3ST3A1Q9Y663 406 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 LOC105371267A0A1B0GV96 52 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 FRG2CA6NGY1 282 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 NMUP48645 174 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 ADIPOQQ15848 244 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 GHITMQ9H3K2 345 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 A0A087WUJ7 227 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 PPP1R17O96001 155 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 VAX1Q5SQQ9 334 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 NOXO1Q8NFA2 376 aa11.49□□□□□ -0.57
COL6A3-206ENST00000409809 RPS16P62249 146 aaKnown RBP11.48□□□□□ -0.57
COL6A3-206ENST00000409809 EDDM3AQ14507 147 aa11.48□□□□□ -0.57
COL6A3-206ENST00000409809 DGAT2L7PQ6IED9 249 aa11.48□□□□□ -0.57
COL6A3-206ENST00000409809 BCORP1Q8N888 145 aa11.48□□□□□ -0.57
COL6A3-206ENST00000409809 ARHGAP5-AS1Q96IT6 56 aa11.48□□□□□ -0.57
COL6A3-206ENST00000409809 SIGLEC7Q9Y286 467 aa11.48□□□□□ -0.57
COL6A3-206ENST00000409809 DOCK10Q96BY6 2186 aa11.48□□□□□ -0.57
COL6A3-206ENST00000409809 TMPRSS11DO60235 418 aa11.48□□□□□ -0.57
COL6A3-206ENST00000409809 OPRK1P41145 380 aa11.48□□□□□ -0.57
COL6A3-206ENST00000409809 TMEM211Q6ICI0 200 aa11.48□□□□□ -0.57
COL6A3-206ENST00000409809 TMEM45BQ96B21 275 aa11.48□□□□□ -0.57
COL6A3-206ENST00000409809 OOEPA6NGQ2 149 aa11.48□□□□□ -0.57
COL6A3-206ENST00000409809 UQCRFS1P47985 274 aa11.48□□□□□ -0.57
COL6A3-206ENST00000409809 GNG3P63215 75 aa11.48□□□□□ -0.57
COL6A3-206ENST00000409809 NR0B2Q15466 257 aa11.48□□□□□ -0.57
COL6A3-206ENST00000409809 SLC25A26Q70HW3 274 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms