RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 TPRX1Q8N7U7 411 aa18.35■□□□□ 0.53
PTCD3-203ENST00000409783 TMEM104Q8NE00 496 aa18.35■□□□□ 0.53
PTCD3-203ENST00000409783 PPP1R35Q8TAP8 253 aa18.35■□□□□ 0.53
PTCD3-203ENST00000409783 PPA2Q9H2U2 334 aa18.35■□□□□ 0.53
PTCD3-203ENST00000409783 IFT22Q9H7X7 185 aa18.35■□□□□ 0.53
PTCD3-203ENST00000409783 AK6Q9Y3D8 172 aaKnown RBP18.35■□□□□ 0.53
PTCD3-203ENST00000409783 SOX21Q9Y651 276 aaPredicted RBP18.35■□□□□ 0.53
PTCD3-203ENST00000409783 A0A087WXM4 84 aa18.34■□□□□ 0.53
PTCD3-203ENST00000409783 GEMIN2O14893 280 aaKnown RBP18.34■□□□□ 0.53
PTCD3-203ENST00000409783 SLC22A1O15245 554 aa18.34■□□□□ 0.53
PTCD3-203ENST00000409783 GTF2F2P13984 249 aa18.34■□□□□ 0.53
PTCD3-203ENST00000409783 CCL3L1P16619 93 aa18.34■□□□□ 0.53
PTCD3-203ENST00000409783 MEF2CQ06413 473 aaPredicted RBP18.34■□□□□ 0.53
PTCD3-203ENST00000409783 EDDM3AQ14507 147 aa18.34■□□□□ 0.53
PTCD3-203ENST00000409783 KRTAP21-3Q3LHN1 58 aa18.34■□□□□ 0.53
PTCD3-203ENST00000409783 METAP1DQ6UB28 335 aaPredicted RBP18.34■□□□□ 0.53
PTCD3-203ENST00000409783 C22orf15Q8WYQ4 148 aa18.34■□□□□ 0.53
PTCD3-203ENST00000409783 SLC25A28Q96A46 364 aa18.34■□□□□ 0.53
PTCD3-203ENST00000409783 COQ2Q96H96 371 aa18.34■□□□□ 0.53
PTCD3-203ENST00000409783 SIRT7Q9NRC8 400 aa18.34■□□□□ 0.53
PTCD3-203ENST00000409783 PCDHB16Q9NRJ7 776 aa18.34■□□□□ 0.53
PTCD3-203ENST00000409783 KIAA2026Q5HYC2 2103 aa18.34■□□□□ 0.53
PTCD3-203ENST00000409783 TRAV1-2A0A0B4J238 106 aa18.33■□□□□ 0.52
PTCD3-203ENST00000409783 PRTN3P24158 256 aa18.33■□□□□ 0.52
PTCD3-203ENST00000409783 FGF9P31371 208 aaPredicted RBP18.33■□□□□ 0.52
PTCD3-203ENST00000409783 P2RX3P56373 397 aa18.33■□□□□ 0.52
PTCD3-203ENST00000409783 PRB3Q04118 309 aaPredicted RBP18.33■□□□□ 0.52
PTCD3-203ENST00000409783 LINC00596Q86U02 117 aa18.33■□□□□ 0.52
PTCD3-203ENST00000409783 LHX4Q969G2 390 aa18.33■□□□□ 0.52
PTCD3-203ENST00000409783 MRPS24Q96EL2 167 aaKnown RBP18.33■□□□□ 0.52
PTCD3-203ENST00000409783 SLC6A7Q99884 636 aa18.33■□□□□ 0.52
PTCD3-203ENST00000409783 BANF2Q9H503 90 aa18.33■□□□□ 0.52
PTCD3-203ENST00000409783 METTL8Q9H825 291 aaKnown RBP18.33■□□□□ 0.52
PTCD3-203ENST00000409783 GHRLQ9UBU3 117 aa18.33■□□□□ 0.52
PTCD3-203ENST00000409783 MEX3AA1L020 520 aaKnown RBP18.32■□□□□ 0.52
PTCD3-203ENST00000409783 C17orf98A8MV24 154 aa18.32■□□□□ 0.52
PTCD3-203ENST00000409783 RNASEK-C17orf49H0YIS7 233 aa18.32■□□□□ 0.52
PTCD3-203ENST00000409783 SLC17A2O00624 439 aa18.32■□□□□ 0.52
PTCD3-203ENST00000409783 MGMTP16455 207 aa18.32■□□□□ 0.52
PTCD3-203ENST00000409783 HTR2CP28335 458 aa18.32■□□□□ 0.52
PTCD3-203ENST00000409783 ERVFRD-1P60508 538 aa18.32■□□□□ 0.52
PTCD3-203ENST00000409783 QRFPP83859 136 aa18.32■□□□□ 0.52
PTCD3-203ENST00000409783 AESQ08117 197 aa18.32■□□□□ 0.52
PTCD3-203ENST00000409783 SCGB2A2Q13296 93 aa18.32■□□□□ 0.52
PTCD3-203ENST00000409783 TAF9Q16594 264 aa18.32■□□□□ 0.52
PTCD3-203ENST00000409783 GPR157Q5UAW9 335 aa18.32■□□□□ 0.52
PTCD3-203ENST00000409783 C22orf42Q6IC83 251 aa18.32■□□□□ 0.52
PTCD3-203ENST00000409783 HCP5Q6MZN7 132 aa18.32■□□□□ 0.52
PTCD3-203ENST00000409783 BRD3OSQ6XYD6 125 aa18.32■□□□□ 0.52
PTCD3-203ENST00000409783 ZNF48Q96MX3 618 aaPredicted RBP18.32■□□□□ 0.52
PTCD3-203ENST00000409783 TXNL4BQ9NX01 149 aaKnown RBP18.32■□□□□ 0.52
PTCD3-203ENST00000409783 STUB1Q9UNE7 303 aa18.32■□□□□ 0.52
PTCD3-203ENST00000409783 IGHV1-69DA0A0B4J2H0 117 aa18.31■□□□□ 0.52
PTCD3-203ENST00000409783 IGHV1-69P01742 117 aa18.31■□□□□ 0.52
PTCD3-203ENST00000409783 UBBP0CG47 229 aa18.31■□□□□ 0.52
PTCD3-203ENST00000409783 VSIG8P0DPA2 414 aa18.31■□□□□ 0.52
PTCD3-203ENST00000409783 FPR2P25090 351 aa18.31■□□□□ 0.52
PTCD3-203ENST00000409783 GLIPR1P48060 266 aa18.31■□□□□ 0.52
PTCD3-203ENST00000409783 BPIFB3P59826 476 aa18.31■□□□□ 0.52
PTCD3-203ENST00000409783 MPV17LQ2QL34 196 aa18.31■□□□□ 0.52
PTCD3-203ENST00000409783 PAN3Q58A45 887 aaKnown RBP18.31■□□□□ 0.52
PTCD3-203ENST00000409783 RUSC1-AS1Q66K80 236 aa18.31■□□□□ 0.52
PTCD3-203ENST00000409783 SUMF2Q8NBJ7 301 aa18.31■□□□□ 0.52
PTCD3-203ENST00000409783 OR6M1Q8NGM8 313 aa18.31■□□□□ 0.52
PTCD3-203ENST00000409783 Q96M66 194 aa18.31■□□□□ 0.52
PTCD3-203ENST00000409783 OR51E2Q9H255 320 aa18.31■□□□□ 0.52
PTCD3-203ENST00000409783 OCEL1Q9H607 264 aa18.31■□□□□ 0.52
PTCD3-203ENST00000409783 LINC00312Q9Y6C7 94 aa18.31■□□□□ 0.52
PTCD3-203ENST00000409783 ATRQ13535 2644 aa18.3■□□□□ 0.52
PTCD3-203ENST00000409783 A0A1W2PPH5 198 aa18.3■□□□□ 0.52
PTCD3-203ENST00000409783 hADV38S2A0JD32 116 aa18.3■□□□□ 0.52
PTCD3-203ENST00000409783 HSPB6O14558 160 aa18.3■□□□□ 0.52
PTCD3-203ENST00000409783 OR7C1O76099 320 aaPredicted RBP18.3■□□□□ 0.52
PTCD3-203ENST00000409783 ZNF728P0DKX0 622 aa18.3■□□□□ 0.52
PTCD3-203ENST00000409783 JUNBP17275 347 aaPredicted RBP18.3■□□□□ 0.52
PTCD3-203ENST00000409783 PAX5Q02548 391 aa18.3■□□□□ 0.52
PTCD3-203ENST00000409783 KLRD1Q13241 179 aa18.3■□□□□ 0.52
PTCD3-203ENST00000409783 BLMHQ13867 455 aa18.3■□□□□ 0.52
PTCD3-203ENST00000409783 ATXN7L3Q14CW9 347 aaPredicted RBP18.3■□□□□ 0.52
PTCD3-203ENST00000409783 OR10K2Q6IF99 312 aa18.3■□□□□ 0.52
PTCD3-203ENST00000409783 BPIFB2Q8N4F0 458 aa18.3■□□□□ 0.52
PTCD3-203ENST00000409783 PLPPR1Q8TBJ4 325 aa18.3■□□□□ 0.52
PTCD3-203ENST00000409783 SELENOIQ9C0D9 397 aa18.3■□□□□ 0.52
PTCD3-203ENST00000409783 MS4A7Q9GZW8 240 aaPredicted RBP18.3■□□□□ 0.52
PTCD3-203ENST00000409783 KCNK15Q9H427 330 aa18.3■□□□□ 0.52
PTCD3-203ENST00000409783 RCC2Q9P258 522 aaKnown RBP18.3■□□□□ 0.52
PTCD3-203ENST00000409783 V9GY05 133 aa18.3■□□□□ 0.52
PTCD3-203ENST00000409783 TMEM14DPA8MWL7 114 aa18.29■□□□□ 0.52
PTCD3-203ENST00000409783 CRTAPO75718 401 aaPredicted RBP18.29■□□□□ 0.52
PTCD3-203ENST00000409783 CD36P16671 472 aa18.29■□□□□ 0.52
PTCD3-203ENST00000409783 UNC119Q13432 240 aa18.29■□□□□ 0.52
PTCD3-203ENST00000409783 SIGIRRQ6IA17 410 aa18.29■□□□□ 0.52
PTCD3-203ENST00000409783 USP43Q70EL4 1123 aa18.29■□□□□ 0.52
PTCD3-203ENST00000409783 NR2C2APQ86WQ0 139 aa18.29■□□□□ 0.52
PTCD3-203ENST00000409783 PDZD9Q8IXQ8 264 aa18.29■□□□□ 0.52
PTCD3-203ENST00000409783 PIP4P2Q8N4L2 257 aa18.29■□□□□ 0.52
PTCD3-203ENST00000409783 CORO2AQ92828 525 aa18.29■□□□□ 0.52
PTCD3-203ENST00000409783 FAM46BQ96A09 425 aa18.29■□□□□ 0.52
PTCD3-203ENST00000409783 ZNF714Q96N38 554 aa18.29■□□□□ 0.52
PTCD3-203ENST00000409783 DPCDQ9BVM2 203 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms