RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 ODAMA1E959 279 aa11.84□□□□□ -0.51
CBX3-203ENST00000409747 LEUTXA8MZ59 168 aa11.84□□□□□ -0.51
CBX3-203ENST00000409747 SULT1B1O43704 296 aa11.84□□□□□ -0.51
CBX3-203ENST00000409747 CD28P10747 220 aa11.84□□□□□ -0.51
CBX3-203ENST00000409747 SCN1BQ07699 218 aa11.84□□□□□ -0.51
CBX3-203ENST00000409747 AESQ08117 197 aa11.84□□□□□ -0.51
CBX3-203ENST00000409747 KRBOX4Q5JUW0 171 aa11.84□□□□□ -0.51
CBX3-203ENST00000409747 KPRPQ5T749 579 aaPredicted RBP11.84□□□□□ -0.51
CBX3-203ENST00000409747 OR4D6Q8NGJ1 314 aa11.84□□□□□ -0.51
CBX3-203ENST00000409747 WIPF2Q8TF74 440 aaPredicted RBP11.84□□□□□ -0.51
CBX3-203ENST00000409747 LIN7BQ9HAP6 207 aa11.84□□□□□ -0.51
CBX3-203ENST00000409747 OR6C3Q9NZP0 311 aa11.84□□□□□ -0.51
CBX3-203ENST00000409747 DHDHQ9UQ10 334 aa11.84□□□□□ -0.51
CBX3-203ENST00000409747 MYRFQ9Y2G1 1151 aa11.84□□□□□ -0.51
CBX3-203ENST00000409747 TOR1AO14656 332 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 MMP23AO75900 390 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 TMEM225BP0DP42 221 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 CD34P28906 385 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 GLIPR1P48060 266 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 MTNR1BP49286 362 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 BLCAPP62952 87 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 RAB40BQ12829 278 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 KISS1Q15726 138 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 HIST2H2BDQ6DRA6 164 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 LHFPL3Q86UP9 236 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 PARP16Q8N5Y8 322 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 OR5AK2Q8NH90 309 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 TSEN15Q8WW01 171 aaKnown RBP11.83□□□□□ -0.52
CBX3-203ENST00000409747 STMN2Q93045 179 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 R3HDM4Q96D70 268 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 PLXNB1O43157 2135 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 ZNF729A6NN14 1252 aaPredicted RBP11.83□□□□□ -0.52
CBX3-203ENST00000409747 SLC33A1O00400 549 aaPredicted RBP11.83□□□□□ -0.52
CBX3-203ENST00000409747 DEGS1O15121 323 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 MAGEB3O15480 346 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 ZFPL1O95159 310 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 IGLV1-47P01700 117 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 JUNBP17275 347 aaPredicted RBP11.83□□□□□ -0.52
CBX3-203ENST00000409747 GABRB1P18505 474 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 GBX2P52951 348 aaPredicted RBP11.83□□□□□ -0.52
CBX3-203ENST00000409747 PRRX1P54821 245 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 CCDC144NLQ6NUI1 221 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 CCDC121Q6ZUS5 278 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 LYG1Q8N1E2 194 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 OR5M11Q96RB7 305 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 CITED2Q99967 270 aaPredicted RBP11.83□□□□□ -0.52
CBX3-203ENST00000409747 ERVK13-1Q9NX77 482 aa11.83□□□□□ -0.52
CBX3-203ENST00000409747 OOSP1A8MZH6 123 aa11.82□□□□□ -0.52
CBX3-203ENST00000409747 ZP1P60852 638 aa11.82□□□□□ -0.52
CBX3-203ENST00000409747 Q6P435 159 aa11.82□□□□□ -0.52
CBX3-203ENST00000409747 RHOXF1Q8NHV9 184 aa11.82□□□□□ -0.52
CBX3-203ENST00000409747 MMP28Q9H239 520 aa11.82□□□□□ -0.52
CBX3-203ENST00000409747 ISG20L2Q9H9L3 353 aaKnown RBP11.82□□□□□ -0.52
CBX3-203ENST00000409747 RPL36Q9Y3U8 105 aaKnown RBP11.82□□□□□ -0.52
CBX3-203ENST00000409747 A0A087X0M5 115 aa11.81□□□□□ -0.52
CBX3-203ENST00000409747 A0A1B0GX30 115 aa11.81□□□□□ -0.52
CBX3-203ENST00000409747 RAB3AP20336 220 aa11.81□□□□□ -0.52
CBX3-203ENST00000409747 MNDAP41218 407 aa11.81□□□□□ -0.52
CBX3-203ENST00000409747 ATXN7L3Q14CW9 347 aaPredicted RBP11.81□□□□□ -0.52
CBX3-203ENST00000409747 HLA-DRB5Q30154 266 aa11.81□□□□□ -0.52
CBX3-203ENST00000409747 KLHL22Q53GT1 634 aa11.81□□□□□ -0.52
CBX3-203ENST00000409747 ZNF691Q5VV52 312 aa11.81□□□□□ -0.52
CBX3-203ENST00000409747 ELP2Q6IA86 826 aa11.81□□□□□ -0.52
CBX3-203ENST00000409747 ZNF565Q8N9K5 539 aa11.81□□□□□ -0.52
CBX3-203ENST00000409747 PXT1Q8NFP0 134 aa11.81□□□□□ -0.52
CBX3-203ENST00000409747 COQ2Q96H96 371 aa11.81□□□□□ -0.52
CBX3-203ENST00000409747 OCSTAMPQ9BR26 566 aa11.81□□□□□ -0.52
CBX3-203ENST00000409747 SLC25A33Q9BSK2 321 aa11.81□□□□□ -0.52
CBX3-203ENST00000409747 ZNF286AQ9HBT8 521 aa11.81□□□□□ -0.52
CBX3-203ENST00000409747 PCDHB16Q9NRJ7 776 aa11.81□□□□□ -0.52
CBX3-203ENST00000409747 KBTBD11-OT1A0A1B0GTJ5 212 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 LOC100130705A0A1B0GUX0 176 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 FAM172BPA6NC97 362 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 H0YJX3 145 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 BUB1B-PAK6H3BSN5 160 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 M0QZK8 103 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 OR2F2O95006 317 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 CDK5R1Q15078 307 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 TMEM95Q3KNT9 176 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 PAN3Q58A45 887 aaKnown RBP11.8□□□□□ -0.52
CBX3-203ENST00000409747 TPTE2P1Q5T6R2 138 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 BAIAP2L2Q6UXY1 529 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 Q6ZS46 218 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 RNF144BQ7Z419 303 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 OR5AU1Q8NGC0 362 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 OR51T1Q8NGJ9 327 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 GPER1Q99527 375 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 PDCD1LG2Q9BQ51 273 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 NCOR1P1Q9H4R4 102 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 MRPS18AQ9NVS2 196 aaKnown RBP11.8□□□□□ -0.52
CBX3-203ENST00000409747 AASSQ9UDR5 926 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 AMMECR1Q9Y4X0 333 aaPredicted RBP11.8□□□□□ -0.52
CBX3-203ENST00000409747 CD2P06729 351 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 KCNJ3P48549 501 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 IL13RA2Q14627 380 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 OR52I1Q8NGK6 324 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 OR9G1Q8NH87 305 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 RBM14Q96PK6 669 aaKnown RBP11.8□□□□□ -0.52
CBX3-203ENST00000409747 BARHL1Q9BZE3 327 aa11.8□□□□□ -0.52
CBX3-203ENST00000409747 PPIL3Q9H2H8 161 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms